BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047372
         (254 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006838720.1| hypothetical protein AMTR_s00002p00252090 [A...    71   1e-10
ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containi...    69   8e-10
ref|XP_002978749.1| hypothetical protein SELMODRAFT_109214 [Sela...    68   1e-09
ref|XP_006416152.1| hypothetical protein EUTSA_v10009874mg [Eutr...    67   2e-09
ref|XP_006385606.1| pentatricopeptide repeat-containing family p...    67   2e-09
ref|XP_002329533.1| predicted protein [Populus trichocarpa]            67   2e-09
ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutr...    67   3e-09
ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
ref|XP_004301707.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    66   5e-09
ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containi...    66   5e-09
gb|ESW26235.1| hypothetical protein PHAVU_003G102300g [Phaseolus...    65   7e-09
gb|EMT04224.1| hypothetical protein F775_10866 [Aegilops tauschii]     65   9e-09
ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containi...    65   9e-09
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_002528772.1| pentatricopeptide repeat-containing protein,...    64   2e-08
ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_003573157.1| PREDICTED: pentatricopeptide repeat-containi...    64   2e-08
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t...    64   2e-08
ref|XP_003593079.1| Pentatricopeptide repeat-containing protein ...    64   2e-08

>ref|XP_006838720.1| hypothetical protein AMTR_s00002p00252090 [Amborella trichopoda]
           gi|548841226|gb|ERN01289.1| hypothetical protein
           AMTR_s00002p00252090 [Amborella trichopoda]
          Length = 506

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/84 (46%), Positives = 54/84 (64%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +IHMYS+FG MD A ++F         + WNS+I GYA+ G L E RRLFD  A+DTR  
Sbjct: 326 MIHMYSQFGIMDYAHYIFQK-RQQNCTMSWNSLINGYAQHGSLREARRLFD--AMDTRD- 381

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                 V+WT++I+ Y +AG+V+E
Sbjct: 382 -----AVSWTSMINGYLSAGDVDE 400


>ref|XP_002269187.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like [Vitis vinifera]
          Length = 743

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/82 (42%), Positives = 51/82 (62%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           LIHMYS FG MD A ++F   + + +    NSMI GY RIG+LE+ + LFD I V  +  
Sbjct: 342 LIHMYSMFGFMDFAWYIFFRNSMSYNTQSCNSMINGYIRIGQLEKAQSLFDTIPVRDK-- 399

Query: 183 SWITMMVTWTTVISAYFNAGEV 248
                 ++WT++I+ YFN G++
Sbjct: 400 ------ISWTSMINGYFNVGQI 415


>ref|XP_002978749.1| hypothetical protein SELMODRAFT_109214 [Selaginella moellendorffii]
           gi|300153558|gb|EFJ20196.1| hypothetical protein
           SELMODRAFT_109214 [Selaginella moellendorffii]
          Length = 429

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/82 (45%), Positives = 51/82 (62%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I  Y+R GH+D AR LFD   + RD+V WN+++ GYAR GRL E +RLFDE+ V     
Sbjct: 1   MIAAYARTGHLDLARTLFDR-MENRDSVTWNAIVTGYARHGRLTEAKRLFDEMIVPG--- 56

Query: 183 SWITMMVTWTTVISAYFNAGEV 248
                +V +T +I AY  AG +
Sbjct: 57  -----VVAYTAMIQAYAQAGHL 73


>ref|XP_006416152.1| hypothetical protein EUTSA_v10009874mg [Eutrema salsugineum]
           gi|557093923|gb|ESQ34505.1| hypothetical protein
           EUTSA_v10009874mg [Eutrema salsugineum]
          Length = 699

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/81 (45%), Positives = 48/81 (59%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           LI MY RFG +D AR LFDG ++ RDAV WN++I  YA  G+ EE  +LFD + +     
Sbjct: 223 LISMYKRFGKVDIARKLFDGMSE-RDAVSWNTVINCYASPGKWEEALKLFDRMGLSGVEA 281

Query: 183 SWITMMVTWTTVISAYFNAGE 245
           S    +VTW T    Y  AG+
Sbjct: 282 S----VVTWNTFAGRYLQAGD 298


>ref|XP_006385606.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550342735|gb|ERP63403.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 744

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           LIHMYS FG MD A ++F+   ++      N MI GY RIG++E+ R LFD I       
Sbjct: 345 LIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIPARDN-- 402

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                 +TWT++I  YF+ G V E
Sbjct: 403 ------ITWTSMIVGYFDIGNVSE 420


>ref|XP_002329533.1| predicted protein [Populus trichocarpa]
          Length = 693

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/84 (41%), Positives = 47/84 (55%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           LIHMYS FG MD A ++F+   ++      N MI GY RIG++E+ R LFD I       
Sbjct: 299 LIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIPARDN-- 356

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                 +TWT++I  YF+ G V E
Sbjct: 357 ------ITWTSMIVGYFDIGNVSE 374


>ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutrema salsugineum]
           gi|557096454|gb|ESQ36962.1| hypothetical protein
           EUTSA_v10002407mg [Eutrema salsugineum]
          Length = 784

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 35/83 (42%), Positives = 53/83 (63%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           L+  YS+ G +DCAR +FD   + +D V WNS+I+GYAR G +E  R+LFDEI    RR 
Sbjct: 256 LVSFYSKCGLLDCARKVFDKMGE-KDLVTWNSLIDGYARSGDVETARKLFDEI---PRRD 311

Query: 183 SWITMMVTWTTVISAYFNAGEVE 251
           S+     +WT ++  +  +G++E
Sbjct: 312 SY-----SWTALLHGFSKSGKIE 329


>ref|XP_006350660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Solanum tuberosum]
          Length = 668

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 35/84 (41%), Positives = 50/84 (59%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I  + R G +DCAR +FDG  + +D V WNSM+ GY    RLE  R LFD  ++D +  
Sbjct: 142 VIDCFMRCGEVDCARRVFDG-MEEKDVVSWNSMVSGYVTNDRLEIARELFD--SMDEKN- 197

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                +V+WT+VI  Y   G++EE
Sbjct: 198 -----VVSWTSVICGYVRKGDMEE 216


>ref|XP_004301707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g32415,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 687

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 33/84 (39%), Positives = 49/84 (58%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           LIHMYS +G MD A  LF   ++       NSMI GY  IG+LE+ + LFD + +  +  
Sbjct: 277 LIHMYSAYGIMDYADFLFMKHSNTHSVQSCNSMINGYIHIGKLEQAQNLFDRLPIRDK-- 334

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                 ++WT++I+ YF+ GEV +
Sbjct: 335 ------ISWTSMITGYFSVGEVSK 352


>ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g02750-like [Cucumis sativus]
          Length = 741

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I+ Y + G MD A  +F      RD+VCWNSMI GYA  GR +E  RLF E+       
Sbjct: 332 MINGYLQSGRMDEANEIFSQ-ISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKD--- 387

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                MV+W T+I+AY  AG++++
Sbjct: 388 -----MVSWNTMIAAYAQAGQMDK 406



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/83 (33%), Positives = 48/83 (57%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I  Y+R G ++ AR LF+   D +D VC N++I GYA+     E ++LFDE+ V     
Sbjct: 114 MITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKN--- 170

Query: 183 SWITMMVTWTTVISAYFNAGEVE 251
                +V+W +++S Y   G+++
Sbjct: 171 -----VVSWNSILSGYTKNGKMQ 188


>ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 741

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I+ Y + G MD A  +F      RD+VCWNSMI GYA  GR +E  RLF E+       
Sbjct: 332 MINGYLQSGRMDEANEIFSQ-ISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKD--- 387

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                MV+W T+I+AY  AG++++
Sbjct: 388 -----MVSWNTMIAAYAQAGQMDK 406



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/83 (33%), Positives = 48/83 (57%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I  Y+R G ++ AR LF+   D +D VC N++I GYA+     E ++LFDE+ V     
Sbjct: 114 MITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKN--- 170

Query: 183 SWITMMVTWTTVISAYFNAGEVE 251
                +V+W +++S Y   G+++
Sbjct: 171 -----VVSWNSILSGYTKNGKMQ 188


>gb|ESW26235.1| hypothetical protein PHAVU_003G102300g [Phaseolus vulgaris]
          Length = 579

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 30/84 (35%), Positives = 50/84 (59%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           L+ +YS+ G M  ARH+FDG A+ R  V WNS++ GY + G L+E +  FD+I       
Sbjct: 145 LLDLYSKMGDMGTARHVFDGMAE-RSVVSWNSLLSGYLKAGNLDEAQNFFDQIPKKD--- 200

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                +++W +++S Y  AG +++
Sbjct: 201 -----VISWNSMVSGYAKAGNMDQ 219


>gb|EMT04224.1| hypothetical protein F775_10866 [Aegilops tauschii]
          Length = 582

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/78 (44%), Positives = 46/78 (58%)
 Frame = +3

Query: 21  RFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRMSWITMM 200
           R G +D AR LFD   + RD VCWNSMI+GYAR GR++E R LFDE+            +
Sbjct: 218 RSGGVDRARELFDQMPE-RDLVCWNSMIDGYARQGRMDEARVLFDEMPERN--------V 268

Query: 201 VTWTTVISAYFNAGEVEE 254
           ++W+ V+  Y   GE  E
Sbjct: 269 ISWSIVVDGYVRCGEPSE 286


>ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Fragaria vesca subsp. vesca]
          Length = 739

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/82 (39%), Positives = 50/82 (60%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I  Y+R G ++ AR LFD   D RDA CWN+MI GY++ GR +E +R+FDE+ V     
Sbjct: 112 MITCYTRNGELERARELFDLLPDKRDAACWNAMIAGYSKKGRFDEAKRMFDEMPVKN--- 168

Query: 183 SWITMMVTWTTVISAYFNAGEV 248
                +V+  ++++ Y   GE+
Sbjct: 169 -----LVSCNSMLAGYTKNGEM 185



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/84 (40%), Positives = 49/84 (58%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I  Y+  G MD A  +F+  A  RDAVCWN+MI GYA+ GR+ E   LF       R+M
Sbjct: 330 MISGYAHNGRMDEASQIFNQIA-IRDAVCWNTMIAGYAQCGRMVEALSLF-------RKM 381

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
           +     V+W T+I+ Y   GE+++
Sbjct: 382 T-NKDAVSWNTMITGYAQVGEMDK 404


>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 32/83 (38%), Positives = 49/83 (59%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           L++MYS+ G +DCAR +FDG  D +D V WNS+I+GYAR G ++   +LF+E+       
Sbjct: 153 LVNMYSKCGEIDCARKVFDGMID-KDVVLWNSLIDGYARCGEIDIALQLFEEMPERD--- 208

Query: 183 SWITMMVTWTTVISAYFNAGEVE 251
                  +WT ++      G+VE
Sbjct: 209 -----AFSWTVLVDGLSKCGKVE 226


>ref|XP_002528772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531775|gb|EEF33594.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 676

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/78 (44%), Positives = 49/78 (62%)
 Frame = +3

Query: 21  RFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRMSWITMM 200
           R G ++ AR +FD  +  ++A  WN MI GYA  GR+EE R LFDE  ++ R       +
Sbjct: 115 RNGDLEAARMVFDE-SPVKNAASWNGMIAGYAENGRMEEARALFDE--MEDRN------V 165

Query: 201 VTWTTVISAYFNAGEVEE 254
           +TWT+++S Y  AGEVEE
Sbjct: 166 ITWTSMVSGYCRAGEVEE 183


>ref|XP_004241033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Solanum lycopersicum]
          Length = 668

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/84 (40%), Positives = 50/84 (59%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +I  + R G +DCAR +FDG  + +D V WNSM+ GY    +LE  R LFD  ++D +  
Sbjct: 142 VIDCFMRCGEVDCARRVFDG-MEEKDVVSWNSMLSGYVTNDKLEIARELFD--SMDEKN- 197

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                +V+WT+VI  Y   G++EE
Sbjct: 198 -----VVSWTSVICGYARKGDMEE 216


>ref|XP_003573157.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Brachypodium distachyon]
          Length = 503

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/80 (41%), Positives = 46/80 (57%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           LIH Y+  G +  AR +FDG + +RDA  W S++ GYAR G L + R LFDE+   T   
Sbjct: 118 LIHAYASHGLLRHARQVFDGSSRSRDACSWTSLLTGYARAGSLHDARALFDEMPHRT--- 174

Query: 183 SWITMMVTWTTVISAYFNAG 242
                 V W+ ++SA+  AG
Sbjct: 175 -----PVAWSAMLSAHVGAG 189


>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 738

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           +IHMY+  G MD AR +FD  +  RDAV + ++I GY   G L++ RRLFDEI V     
Sbjct: 172 VIHMYASVGEMDFARLVFDKSS-LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKD--- 227

Query: 183 SWITMMVTWTTVISAYFNAGEVEE 254
                +V+W  +IS Y  +G  EE
Sbjct: 228 -----VVSWNAMISGYVQSGRFEE 246


>ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360447|gb|ABN08457.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355482127|gb|AES63330.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 558

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/83 (42%), Positives = 52/83 (62%)
 Frame = +3

Query: 3   LIHMYSRFGHMDCARHLFDGGADARDAVCWNSMIEGYARIGRLEEVRRLFDEIAVDTRRM 182
           L+ MY++ GH+  AR +FDG  D RD V W +MI GYA+ GR+ + R LFD +     R 
Sbjct: 156 LLDMYAKCGHVCDARDVFDGIVD-RDVVAWTAMICGYAKAGRMVDARFLFDNMG---ERN 211

Query: 183 SWITMMVTWTTVISAYFNAGEVE 251
           S+     TWTT+++ Y N G+++
Sbjct: 212 SF-----TWTTMVAGYANYGDMK 229