BLASTX nr result
ID: Zingiber24_contig00047297
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00047297
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB42572.1| Putative pentatricopeptide repeat-containing prot... 76 5e-12
ref|XP_002520265.1| pentatricopeptide repeat-containing protein,... 74 3e-11
ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat... 70 3e-10
ref|XP_002302206.2| pentatricopeptide repeat-containing family p... 70 4e-10
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera] 69 5e-10
emb|CBI19925.3| unnamed protein product [Vitis vinifera] 69 6e-10
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat... 69 6e-10
gb|EOY16504.1| Pentatricopeptide repeat (PPR) superfamily protei... 68 1e-09
ref|XP_004299926.1| PREDICTED: putative pentatricopeptide repeat... 68 1e-09
ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_006852181.1| hypothetical protein AMTR_s00049p00103660 [A... 65 9e-09
gb|ESW14531.1| hypothetical protein PHAVU_008G289100g [Phaseolus... 65 1e-08
gb|EEE60303.1| hypothetical protein OsJ_13371 [Oryza sativa Japo... 65 1e-08
ref|NP_001051899.1| Os03g0849700 [Oryza sativa Japonica Group] g... 65 1e-08
gb|ABF99910.1| pentatricopeptide, putative, expressed [Oryza sat... 65 1e-08
gb|EEC76535.1| hypothetical protein OsI_14327 [Oryza sativa Indi... 64 2e-08
ref|XP_006434327.1| hypothetical protein CICLE_v10000495mg [Citr... 64 2e-08
ref|XP_006844125.1| hypothetical protein AMTR_s00006p00257350 [A... 63 4e-08
ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat... 63 5e-08
ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
>gb|EXB42572.1| Putative pentatricopeptide repeat-containing protein [Morus
notabilis]
Length = 951
Score = 75.9 bits (185), Expect = 5e-12
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCG-HGSSLQLSNCLLQMYSFCSPSVDD 56
MN D++ + R LQ+C TH+S+ +G+QLH L LK G GS + + N LLQMY C S D
Sbjct: 37 MNPDVYSLVRLLQSCNTHQSIHQGKQLHLLFLKKGLLGSDVTIGNRLLQMYLRCG-STSD 95
Query: 55 ARKVFDEMPCSNSFSWNS 2
A +F+EMP N FSWN+
Sbjct: 96 AHALFEEMPHRNCFSWNT 113
>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 681
Score = 73.6 bits (179), Expect = 3e-11
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCGH-GSSLQLSNCLLQMYSFCSPSVDD 56
M+ +L +AR LQ+ TH S+ +G+QLH L LK G +++ L+N LLQMY+ C ++ D
Sbjct: 1 MDLELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTD 60
Query: 55 ARKVFDEMPCSNSFSWNS 2
A +FDEMP N FSWN+
Sbjct: 61 AHNLFDEMPERNCFSWNT 78
>ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cicer arietinum]
Length = 1030
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = -1
Query: 217 HLIARWLQACRTHRS--LSRGRQLHQLLLKCGHGSSLQLSNCLLQMYSFCSPSVDDARKV 44
+ I L+AC+ S L G Q+H L+ K H S + LSN L+ MYS CS S+DDAR+V
Sbjct: 138 YAIGSALRACQQSGSTRLKLGMQIHALISKSQHDSDMVLSNVLMSMYSVCSDSIDDARRV 197
Query: 43 FDEMPCSNSFSWNS 2
FDE+ NS +WNS
Sbjct: 198 FDEIKFRNSVTWNS 211
>ref|XP_002302206.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344485|gb|EEE81479.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 681
Score = 69.7 bits (169), Expect = 4e-10
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCGH-GSSLQLSNCLLQMYSFCSPSVDD 56
M+ DL +AR+LQ+ T S+ +G+QLH L K G S+L L+N LLQMY+ C S+ +
Sbjct: 1 MDLDLQNLARFLQSLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCG-SMTN 59
Query: 55 ARKVFDEMPCSNSFSWNS 2
A K+FDEMP N FSWN+
Sbjct: 60 AHKLFDEMPHRNCFSWNT 77
>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 69.3 bits (168), Expect = 5e-10
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCG-HGSSLQLSNCLLQMYSFCSPSVDD 56
++ DLH +AR L +C + S+ RGR LH L LK G S L + N LLQMYS C+ S+ +
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCN-SMRE 60
Query: 55 ARKVFDEMPCSNSFSWNS 2
A+++F+EMP N FSWN+
Sbjct: 61 AQQLFEEMPKRNCFSWNT 78
>emb|CBI19925.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCG-HGSSLQLSNCLLQMYSFCSPSVDD 56
++ DLH +AR L +C + S+ RGR LH L LK G S L + N LLQMYS C+ S+ +
Sbjct: 38 VDLDLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCN-SMRE 96
Query: 55 ARKVFDEMPCSNSFSWNS 2
A+++F+EMP N FSWN+
Sbjct: 97 AQQLFEEMPKRNCFSWNT 114
>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCG-HGSSLQLSNCLLQMYSFCSPSVDD 56
++ DLH +AR L +C + S+ RGR LH L LK G S L + N LLQMYS C+ S+ +
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCN-SMRE 60
Query: 55 ARKVFDEMPCSNSFSWNS 2
A+++F+EMP N FSWN+
Sbjct: 61 AQQLFEEMPKRNCFSWNT 78
>gb|EOY16504.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 675
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCG-HGSSLQLSNCLLQMYSFCSPSVDD 56
M DL AR LQ+C TH + G+QLH LK G S++ + N LLQ+YS CS + +
Sbjct: 1 MELDLQNYARILQSCNTHNFILLGKQLHSFFLKKGILSSTITIGNRLLQLYSRCS-TTTE 59
Query: 55 ARKVFDEMPCSNSFSWNS 2
K+FDEMP N FSWN+
Sbjct: 60 TWKLFDEMPHRNCFSWNT 77
>ref|XP_004299926.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 682
Score = 67.8 bits (164), Expect = 1e-09
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCG-HGSSLQLSNCLLQMYSFCSPSVDD 56
MN +LH + L +C TH SL G+QLH LK G S++ + N LLQMY C ++DD
Sbjct: 1 MNLELHSLVNILHSCNTHLSLYLGKQLHLTFLKKGLINSTVTIGNRLLQMYVKCG-TMDD 59
Query: 55 ARKVFDEMPCSNSFSWNS 2
A +FDEM N FSWN+
Sbjct: 60 ALNLFDEMAHRNGFSWNT 77
>ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
Length = 1390
Score = 66.6 bits (161), Expect = 3e-09
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCG-HGSSLQLSNCLLQMYSFCSPSVDD 56
M+ + +AR LQ+C TH S+ G+QLH LK G S+L ++N LLQMY C + D
Sbjct: 710 MDTSIDYLARLLQSCNTHHSIHVGKQLHLHFLKKGILNSTLPIANRLLQMYMRCG-NPTD 768
Query: 55 ARKVFDEMPCSNSFSWNS 2
A +FDEMP N FSWN+
Sbjct: 769 ALLLFDEMPRRNCFSWNA 786
>ref|XP_006852181.1| hypothetical protein AMTR_s00049p00103660 [Amborella trichopoda]
gi|548855785|gb|ERN13648.1| hypothetical protein
AMTR_s00049p00103660 [Amborella trichopoda]
Length = 684
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCGHGSSLQLSNCLLQMYSFCSPSVDDA 53
M D+ AR L++C T+ SL G +LH L+K G + L + NCLLQMY C S DA
Sbjct: 1 MFVDIITAARILRSCATYESLCHGMRLHLYLIKSGQDTGLFIHNCLLQMYVKCG-STGDA 59
Query: 52 RKVFDEMPCSNSFSWNS 2
+ F +MP N+FS+N+
Sbjct: 60 HQFFHQMPQRNTFSFNT 76
>gb|ESW14531.1| hypothetical protein PHAVU_008G289100g [Phaseolus vulgaris]
Length = 1030
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = -1
Query: 217 HLIARWLQACRT--HRSLSRGRQLHQLLLKCGHGSSLQLSNCLLQMYSFCSPSVDDARKV 44
+ I L+AC+ L G ++H L+ K + S + LSN L+ MYS CS S+DDAR+V
Sbjct: 138 YAIGSALRACQEIGPNKLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRV 197
Query: 43 FDEMPCSNSFSWNS 2
FDE+ S SWNS
Sbjct: 198 FDEIKIKTSASWNS 211
>gb|EEE60303.1| hypothetical protein OsJ_13371 [Oryza sativa Japonica Group]
Length = 797
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = -1
Query: 223 DLHLIARWLQACRTHRSLSRGRQLHQLLLKCGH-GSSLQLSNCLLQMYSFCSP-SVDDAR 50
D+ + L++C S G+QLHQLLLK GH SSL SN LL MY+ CSP DAR
Sbjct: 6 DVRNCIQLLRSC----SAVAGQQLHQLLLKSGHVPSSLPPSNSLLLMYARCSPLHQHDAR 61
Query: 49 KVFDEMPCSNSFSWNS 2
++FDEMP N FS+NS
Sbjct: 62 RLFDEMPVKNCFSYNS 77
>ref|NP_001051899.1| Os03g0849700 [Oryza sativa Japonica Group]
gi|113550370|dbj|BAF13813.1| Os03g0849700 [Oryza sativa
Japonica Group]
Length = 724
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = -1
Query: 223 DLHLIARWLQACRTHRSLSRGRQLHQLLLKCGH-GSSLQLSNCLLQMYSFCSP-SVDDAR 50
D+ + L++C S G+QLHQLLLK GH SSL SN LL MY+ CSP DAR
Sbjct: 6 DVRNCIQLLRSC----SAVAGQQLHQLLLKSGHVPSSLPPSNSLLLMYARCSPLHQHDAR 61
Query: 49 KVFDEMPCSNSFSWNS 2
++FDEMP N FS+NS
Sbjct: 62 RLFDEMPVKNCFSYNS 77
>gb|ABF99910.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group] gi|215767226|dbj|BAG99454.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 684
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/76 (52%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = -1
Query: 223 DLHLIARWLQACRTHRSLSRGRQLHQLLLKCGH-GSSLQLSNCLLQMYSFCSP-SVDDAR 50
D+ + L++C S G+QLHQLLLK GH SSL SN LL MY+ CSP DAR
Sbjct: 6 DVRNCIQLLRSC----SAVAGQQLHQLLLKSGHVPSSLPPSNSLLLMYARCSPLHQHDAR 61
Query: 49 KVFDEMPCSNSFSWNS 2
++FDEMP N FS+NS
Sbjct: 62 RLFDEMPVKNCFSYNS 77
>gb|EEC76535.1| hypothetical protein OsI_14327 [Oryza sativa Indica Group]
Length = 797
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/56 (64%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
Frame = -1
Query: 163 GRQLHQLLLKCGH-GSSLQLSNCLLQMYSFCSP-SVDDARKVFDEMPCSNSFSWNS 2
G+QLHQLLLK GH SSL SN LL MY+ CSP DAR++FDEMP N FS+NS
Sbjct: 22 GQQLHQLLLKSGHVPSSLPPSNSLLLMYARCSPLHQHDARRLFDEMPVKNCFSYNS 77
>ref|XP_006434327.1| hypothetical protein CICLE_v10000495mg [Citrus clementina]
gi|557536449|gb|ESR47567.1| hypothetical protein
CICLE_v10000495mg [Citrus clementina]
Length = 681
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = -1
Query: 232 MNADLHLIARWLQACRTHRSLSRGRQLHQLLLKCG-HGSSLQLSNCLLQMYSFCSPSVDD 56
M+ + +AR LQ+C TH S+ G+QLH LK G S+L ++N LL MY C + D
Sbjct: 1 MDTRIDYLARLLQSCNTHHSIHVGKQLHLHFLKKGILNSTLPIANRLLLMYMRCG-NPTD 59
Query: 55 ARKVFDEMPCSNSFSWNS 2
A +FDEMP N FSWN+
Sbjct: 60 ALLLFDEMPLRNCFSWNA 77
>ref|XP_006844125.1| hypothetical protein AMTR_s00006p00257350 [Amborella trichopoda]
gi|548846524|gb|ERN05800.1| hypothetical protein
AMTR_s00006p00257350 [Amborella trichopoda]
Length = 668
Score = 63.2 bits (152), Expect = 4e-08
Identities = 34/75 (45%), Positives = 48/75 (64%)
Frame = -1
Query: 226 ADLHLIARWLQACRTHRSLSRGRQLHQLLLKCGHGSSLQLSNCLLQMYSFCSPSVDDARK 47
AD ++ L AC T +LS+G Q+H L LK +GS + +SN LL MY+ C S+++A K
Sbjct: 347 ADAITLSGVLSACATLEALSQGSQIHTLSLKTSYGSDICVSNALLDMYAKCK-SLEEACK 405
Query: 46 VFDEMPCSNSFSWNS 2
VF EM +S SWN+
Sbjct: 406 VFGEMVYRDSVSWNA 420
>ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = -1
Query: 217 HLIARWLQACRT--HRSLSRGRQLHQLLLKCGHGSSLQLSNCLLQMYSFCSPSVDDARKV 44
+ I L+AC+ L G ++H L+ K + S + LSN L+ MYS CS S+DDAR+V
Sbjct: 141 YAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRV 200
Query: 43 FDEMPCSNSFSWNS 2
F+E+ S SWNS
Sbjct: 201 FEEIKMKTSASWNS 214
>ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/69 (43%), Positives = 44/69 (63%)
Frame = -1
Query: 208 ARWLQACRTHRSLSRGRQLHQLLLKCGHGSSLQLSNCLLQMYSFCSPSVDDARKVFDEMP 29
A L C T L G+Q+H ++KCG G +L++ N ++ MY C SVDDA KVF +MP
Sbjct: 504 ASMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCG-SVDDAMKVFGDMP 562
Query: 28 CSNSFSWNS 2
C++ +WN+
Sbjct: 563 CTDIVTWNT 571