BLASTX nr result

ID: Zingiber24_contig00047226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047226
         (376 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006647826.1| PREDICTED: dof zinc finger protein DOF5.4-li...    58   1e-06
dbj|BAJ92677.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   2e-06
dbj|BAJ95786.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   2e-06
emb|CAJ29313.1| dof zinc finger protein 8 [Hordeum vulgare subsp...    57   2e-06
ref|XP_002452623.1| hypothetical protein SORBIDRAFT_04g029300 [S...    56   4e-06
ref|XP_004953765.1| PREDICTED: dof zinc finger protein DOF5.4-li...    56   6e-06
ref|XP_003570468.1| PREDICTED: uncharacterized protein LOC100828...    55   7e-06

>ref|XP_006647826.1| PREDICTED: dof zinc finger protein DOF5.4-like [Oryza brachyantha]
          Length = 279

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
 Frame = -2

Query: 375 RNVPVGGGCRKSKRPSKFTSPTSSNKNPSRRRNPLSAVRSSVDD--STAAGSATSDPSTS 202
           RNVPVGGGCRKSKR S  +S  S+   P+   N  +  R+S     S++ GS  + PS +
Sbjct: 86  RNVPVGGGCRKSKRSSSSSSAPSAPSTPTATDNAKNQRRASASSPRSSSGGSGNTSPSAA 145

Query: 201 EPLPDPSLLASQICVPNHN--PQLGKITN---ADLPLPAPNIFETQS---AGGFATTPSP 46
               + +   +    P+ N    +   TN    D+P PAP IF  Q+   A  FA  P P
Sbjct: 146 AAAANAATTPTTPATPSSNTISVINHATNPFPTDVPPPAP-IFADQAAALASLFAPPPPP 204

Query: 45  LL 40
            L
Sbjct: 205 PL 206


>dbj|BAJ92677.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 286

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
 Frame = -2

Query: 375 RNVPVGGGCRKSKRPSKFTS----PTSSNKNPSRRRNPLSAVRSSVDDSTAAGSATSDPS 208
           RNVPVGGGCRK+KR S   S    P +++    RR +  S+ RS+   ++   +     +
Sbjct: 89  RNVPVGGGCRKAKRSSSAASAPSTPAATDAKSQRRASASSSSRSNSGSASPTATGEETTT 148

Query: 207 TSEPLPDPSLLASQICVPNHNPQLGKITNADLPLPAPNIFETQS---AGGFATTPSPLL 40
              P P PS  ++   V   N        AD+P PAP IF  Q+   A  FA  P P L
Sbjct: 149 ADPPPPTPSSNSNSNTVAFGNRSTNYPFAADVPPPAP-IFADQAAALASLFAPPPPPPL 206


>dbj|BAJ95786.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 286

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
 Frame = -2

Query: 375 RNVPVGGGCRKSKRPSKFTS----PTSSNKNPSRRRNPLSAVRSSVDDSTAAGSATSDPS 208
           RNVPVGGGCRK+KR S   S    P +++    RR +  S+ RS+   ++   +     +
Sbjct: 89  RNVPVGGGCRKAKRSSSAASAPSTPAATDAKSQRRASASSSSRSNSGSASPTATGEETTT 148

Query: 207 TSEPLPDPSLLASQICVPNHNPQLGKITNADLPLPAPNIFETQS---AGGFATTPSPLL 40
              P P PS  ++   V   N        AD+P PAP IF  Q+   A  FA  P P L
Sbjct: 149 ADPPPPTPSSNSNSNTVAFGNRSTNYPFAADVPPPAP-IFADQAAALASLFAPPPPPPL 206


>emb|CAJ29313.1| dof zinc finger protein 8 [Hordeum vulgare subsp. vulgare]
          Length = 286

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 42/119 (35%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
 Frame = -2

Query: 375 RNVPVGGGCRKSKRPSKFTS----PTSSNKNPSRRRNPLSAVRSSVDDSTAAGSATSDPS 208
           RNVPVGGGCRK+KR S   S    P +++    RR +  S+ RS+   ++   +     +
Sbjct: 89  RNVPVGGGCRKAKRSSSAASAPSTPAATDAKSQRRASASSSSRSNSGSASPTATGEETTT 148

Query: 207 TSEPLPDPSLLASQICVPNHNPQLGKITNADLPLPAPNIFETQS---AGGFATTPSPLL 40
              P P PS  ++   V   N        AD+P PAP IF  Q+   A  FA  P P L
Sbjct: 149 ADPPPPTPSSNSNANTVAFGNRSTNYPFAADVPPPAP-IFADQAAALASLFAPPPPPPL 206


>ref|XP_002452623.1| hypothetical protein SORBIDRAFT_04g029300 [Sorghum bicolor]
           gi|241932454|gb|EES05599.1| hypothetical protein
           SORBIDRAFT_04g029300 [Sorghum bicolor]
           gi|316658044|tpg|DAA34021.1| TPA_inf: Dof-type zinc
           finger protein 18 [Sorghum bicolor]
           gi|496205471|gb|AGL40022.1| dof18 protein [Sorghum
           bicolor]
          Length = 304

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
 Frame = -2

Query: 375 RNVPVGGGCRKSKRPSKFTSPTSS--------------NKNPSRRRNPLSAVRSSVDDS- 241
           RNVPVGGGCRK+KR S  +S TSS              NKNP  RR   S+ RS+   S 
Sbjct: 91  RNVPVGGGCRKTKRASSSSSATSSVPSTPTSGSGDAAANKNP--RRASASSPRSTNSGSA 148

Query: 240 --TAAGSATSDPSTSEPLPDPSLLASQICVPNHNPQLGKITNADLPLPAPNIFETQSAGG 67
             TAA + T  P+ + P    S  +  +   + +      +  D+  P   IF  Q+A  
Sbjct: 149 SPTAAAATTPTPAPTTPATPSSNSSVAVFTTSSHHHSSPFSTIDVVAPPAPIFADQAAAR 208

Query: 66  ---FATTPSPLL 40
              FA  P P L
Sbjct: 209 ASLFAPPPPPPL 220


>ref|XP_004953765.1| PREDICTED: dof zinc finger protein DOF5.4-like [Setaria italica]
          Length = 288

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
 Frame = -2

Query: 375 RNVPVGGGCRKSKRPSKFTSPTSSNKNPSR---RRNPLSAVRSSVDDSTAAGSATSDPS- 208
           RNVPVGGGCRK+KR S  +SP+S+   P+     +NP  A  SS   ++ +GS ++ P+ 
Sbjct: 90  RNVPVGGGCRKAKRSSSSSSPSSAPSTPTSATDAKNPRRASASSPRSNSGSGSGSASPTA 149

Query: 207 --TSEPLPDPSLLASQICVPNHNPQLGKITNADLPLPAPNIFETQS---AGGFATTPSPL 43
              + P    +  ++ I + +H+      +  D+  PAP IF   +   A  FA  P P 
Sbjct: 150 AVATAPTTPATPSSNSIGLTSHH--TNPFSTVDVAPPAP-IFADHAAALASLFAPPPPPP 206

Query: 42  L 40
           L
Sbjct: 207 L 207


>ref|XP_003570468.1| PREDICTED: uncharacterized protein LOC100828498 [Brachypodium
           distachyon]
          Length = 272

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 52/128 (40%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
 Frame = -2

Query: 375 RNVPVGGGCRKSKRPSKFTSPTS-SNKNPSRRRNPLSAVRSSVDDSTAAGSATSDPSTSE 199
           RNVPVGGGCRKSKR S   +P S ++ N +  +    A  SS D ++ +GS TS  +T  
Sbjct: 85  RNVPVGGGCRKSKRSSSSATPASPTDANNANSKTQRRASSSSRDSNSNSGS-TSPTATPS 143

Query: 198 PLPDPSLLASQICVPNHNPQLGKITNADLPLPAPNIFETQS---AGGFATTPSPLLG-FI 31
               P   A        NP  G     D+P PAP IF  Q+   A  FA  P P L  F 
Sbjct: 144 SNTTPITFA--------NPFAG-----DVPPPAP-IFADQAAALASLFAPPPPPPLPVFN 189

Query: 30  F-PDPSTE 10
           F P P TE
Sbjct: 190 FSPQPKTE 197


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