BLASTX nr result

ID: Zingiber24_contig00047198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047198
         (748 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004292247.1| PREDICTED: ABC transporter C family member 5...    57   9e-06

>ref|XP_004292247.1| PREDICTED: ABC transporter C family member 5-like [Fragaria vesca
           subsp. vesca]
          Length = 1540

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
 Frame = -1

Query: 415 NPIFGRTMISLGFISSLRRLPFPDQIAVAVHTSXXXXXXXFASARRVLACTIRHLPTLKH 236
           NP+    M  LG +  L   PF +  ++ ++ +         S RR+  C  R       
Sbjct: 21  NPVQQSRMTLLGAVQGL---PFLELSSIVINLALVLAFLLVVSVRRMFVCLGRIRVVKDE 77

Query: 235 DSQNPVPV-HGDSGFGRFAIARVGYWFEVTAXXXXXXXFLQILVLGYLTVNLIWGESQSR 59
              N  P+ H  S  GR    RVG  F+ +        F+Q++VLG+  V L+ G  +  
Sbjct: 78  LGSNGNPIRHESSVDGRIQEVRVGTDFKFSVFCCFYVLFVQVVVLGFDGVGLVRGGGEVV 137

Query: 58  DYSVLYLPFVQALAWIVL 5
           D+SVL LP  Q LAW VL
Sbjct: 138 DWSVLCLPAAQGLAWSVL 155


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