BLASTX nr result

ID: Zingiber24_contig00047191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047191
         (413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006657853.1| PREDICTED: uncharacterized protein LOC102706...    61   2e-07

>ref|XP_006657853.1| PREDICTED: uncharacterized protein LOC102706861 isoform X1 [Oryza
           brachyantha] gi|573951135|ref|XP_006657854.1| PREDICTED:
           uncharacterized protein LOC102706861 isoform X2 [Oryza
           brachyantha] gi|573951137|ref|XP_006657855.1| PREDICTED:
           uncharacterized protein LOC102706861 isoform X3 [Oryza
           brachyantha]
          Length = 950

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
 Frame = +3

Query: 3   KFTIVDTSLTLGEEPFKLRELRTLPVDAVNNYAPLANIGEIAXXXXXXXXXXXXXGQG-- 176
           KFT+VDTS+  GEEP K+R LR LP DA + Y    + G+                Q   
Sbjct: 493 KFTVVDTSVVQGEEPCKVRSLRNLPTDASHGYMSSPHSGDSGSDSSEEHSDSEDSSQSYE 552

Query: 177 --NSDPNSCDNKMAKL-KCKGISRQALHSDPSESEITFTSTTVPHNEHVSSDKCVEQINE 347
             N++ N  D K   + KCK  +   +  D  +   TF+ T    N H+S D+    IN 
Sbjct: 553 HINTNQNKTDAKYDSVKKCKPPTGDRMDVDVLQKNSTFSGTLTSTNGHMSIDQGFSIINS 612

Query: 348 KLP 356
             P
Sbjct: 613 SCP 615


Top