BLASTX nr result
ID: Zingiber24_contig00047133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00047133
(386 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI35966.3| unnamed protein product [Vitis vinifera] 55 1e-10
ref|XP_006850798.1| hypothetical protein AMTR_s00025p00108510 [A... 67 3e-09
ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, put... 52 3e-07
gb|EOY25237.1| Tetratricopeptide repeat-like superfamily protein... 54 1e-06
ref|XP_006432677.1| hypothetical protein CICLE_v10000638mg [Citr... 53 1e-06
ref|XP_006827122.1| hypothetical protein AMTR_s00010p00246970 [A... 58 1e-06
ref|XP_002509440.1| pentatricopeptide repeat-containing protein,... 58 1e-06
ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containi... 50 3e-06
ref|XP_006368339.1| pentatricopeptide repeat-containing family p... 46 3e-06
emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera] 51 4e-06
gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein... 56 4e-06
ref|XP_003588473.1| Pentatricopeptide repeat-containing protein ... 56 4e-06
gb|EXC26223.1| hypothetical protein L484_022794 [Morus notabilis] 49 5e-06
ref|XP_006467747.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
ref|XP_006449392.1| hypothetical protein CICLE_v10018358mg [Citr... 56 6e-06
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera] 56 6e-06
ref|XP_006382294.1| hypothetical protein POPTR_0005s00730g, part... 55 7e-06
ref|XP_002330010.1| predicted protein [Populus trichocarpa] 55 7e-06
ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containi... 48 8e-06
>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 55.1 bits (131), Expect(2) = 1e-10
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
NFT+P G Q+H HV++LGF DL+V NSLIDMY KC +D A +
Sbjct: 93 NFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWD 152
Query: 3 E 1
+
Sbjct: 153 D 153
Score = 36.6 bits (83), Expect(2) = 1e-10
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 376 LLGLVRRATTSSHARQVHAQXXXXXXXXXXXXLCKLAELRSSDYALAVFRRLPSP 212
LL L+R AT+ + Q+HAQ + KL +L S DYA V + PSP
Sbjct: 2 LLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHSIDYARFVLDQTPSP 56
>ref|XP_006850798.1| hypothetical protein AMTR_s00025p00108510 [Amborella trichopoda]
gi|548854469|gb|ERN12379.1| hypothetical protein
AMTR_s00025p00108510 [Amborella trichopoda]
Length = 233
Score = 66.6 bits (161), Expect = 3e-09
Identities = 31/61 (50%), Positives = 39/61 (63%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
NFT+PP LG+QVH V KLG + D++ GN+L+DMYSKC I DAH+V E
Sbjct: 10 NFTFPPLLNACSRIPAAILGQQVHTQVAKLGLVSDIFTGNALVDMYSKCDCIVDAHRVFE 69
Query: 3 E 1
E
Sbjct: 70 E 70
>ref|XP_002518995.1| GTP-binding protein alpha subunit, gna, putative [Ricinus communis]
gi|223541982|gb|EEF43528.1| GTP-binding protein alpha
subunit, gna, putative [Ricinus communis]
Length = 1203
Score = 51.6 bits (122), Expect(2) = 3e-07
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
NFTYP Q+H H+ KLGF DLYV NSLI+MY KC I+ + V +
Sbjct: 992 NFTYPALIKACAWLRAIDESMQIHGHIFKLGFEEDLYVQNSLINMYGKCGKIELSCDVFK 1051
Query: 3 E 1
+
Sbjct: 1052 Q 1052
Score = 28.1 bits (61), Expect(2) = 3e-07
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Frame = -2
Query: 373 LGLVRRATTSSHARQVHAQXXXXXXXXXXXXL------CKLAELRSSDYALAVFRRLPSP 212
L L++R RQ HAQ C L+ S DYA ++FR++ P
Sbjct: 896 LSLLKRCQNMEEFRQAHAQILKWGFFSNPFCASNLVATCALSHWGSMDYACSIFRQIDQP 955
>gb|EOY25237.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 703
Score = 53.5 bits (127), Expect(2) = 1e-06
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
NFTYP G+Q+H H KLG DLYV NSLI+MY KC I+ + + E
Sbjct: 229 NFTYPALFKACACLQAQEEGKQIHGHAFKLGLESDLYVQNSLINMYGKCGEIEHSCAIFE 288
Query: 3 E 1
+
Sbjct: 289 Q 289
Score = 24.3 bits (51), Expect(2) = 1e-06
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Frame = -2
Query: 367 LVRRATTSSHARQVHAQXXXXXXXXXXXXL------CKLAELRSSDYALAVFRRLPSP 212
+++R RQ HAQ C L++ S DYA ++F+++ P
Sbjct: 135 ILKRCKNMEEFRQAHAQIVKWGFFWNSFCASNLVAACALSDGGSMDYACSIFQQIDEP 192
>ref|XP_006432677.1| hypothetical protein CICLE_v10000638mg [Citrus clementina]
gi|568834767|ref|XP_006471474.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g31920-like [Citrus sinensis]
gi|557534799|gb|ESR45917.1| hypothetical protein
CICLE_v10000638mg [Citrus clementina]
Length = 605
Score = 53.1 bits (126), Expect(2) = 1e-06
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
+FT+P G Q+H HV KLGF +DL+V NSLI+MY KC ++ A + +
Sbjct: 131 HFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFK 190
Query: 3 E 1
+
Sbjct: 191 Q 191
Score = 24.6 bits (52), Expect(2) = 1e-06
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -2
Query: 277 CKLAELRSSDYALAVFRRLPSP 212
C L+ S DYA ++FR++ P
Sbjct: 73 CALSHWGSMDYACSIFRQIDEP 94
>ref|XP_006827122.1| hypothetical protein AMTR_s00010p00246970 [Amborella trichopoda]
gi|548831551|gb|ERM94359.1| hypothetical protein
AMTR_s00010p00246970 [Amborella trichopoda]
Length = 749
Score = 57.8 bits (138), Expect = 1e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = -3
Query: 123 RQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLEE 1
+Q+HAH++KLG DLY G++L+D+YSKC +DDA V EE
Sbjct: 365 KQIHAHMIKLGISLDLYAGSALVDVYSKCFGVDDARLVFEE 405
>ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549339|gb|EEF50827.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 678
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -3
Query: 126 GRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLEE 1
G+QVH HV+K GFI D++ GNSL++MY+KC IDDA + E
Sbjct: 561 GKQVHVHVLKFGFISDIFAGNSLVNMYAKCGSIDDADRAFSE 602
>ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 50.1 bits (118), Expect(2) = 3e-06
Identities = 24/49 (48%), Positives = 27/49 (55%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKC 37
NFTYP G Q+H HV KLG D+YV NSLI+MY KC
Sbjct: 132 NFTYPVVLKACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKC 180
Score = 26.6 bits (57), Expect(2) = 3e-06
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = -2
Query: 373 LGLVRRATTSSHARQVHAQXXXXXXXXXXXXL------CKLAELRSSDYALAVFRRLPSP 212
L LV++ + +QVH Q C L++ S DYA ++F++L P
Sbjct: 36 LCLVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYACSIFQQLDEP 95
>ref|XP_006368339.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550346246|gb|ERP64908.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 602
Score = 46.2 bits (108), Expect(2) = 3e-06
Identities = 24/60 (40%), Positives = 31/60 (51%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
NFTYP G Q+H ++ K G DL+V NSLI+MY KC I+ + V E
Sbjct: 128 NFTYPALFKACASLRSIEEGMQIHGYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFE 187
Score = 30.4 bits (67), Expect(2) = 3e-06
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 373 LGLVRRATTSSHARQVHAQXXXXXXXXXXXXL---CKLAELRSSDYALAVFRRLPSP 212
L L++R +QVHAQ L C L++ S DYA ++FR++ P
Sbjct: 35 LSLMKRCKNMEEFKQVHAQVLKWENSFCASNLVATCALSDWGSMDYACSIFRQIDQP 91
>emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 50.8 bits (120), Expect(2) = 4e-06
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKC 37
NFTYP G QVHAH++KLG D++V NSLI MY KC
Sbjct: 88 NFTYPTLLKACARLPAVEEGMQVHAHILKLGLENDVFVQNSLISMYGKC 136
Score = 25.4 bits (54), Expect(2) = 4e-06
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 277 CKLAELRSSDYALAVFRRLPSP 212
C L++ S DYA ++FR++ P
Sbjct: 30 CALSDWGSMDYACSIFRQMDEP 51
>gb|EOY28177.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 946
Score = 56.2 bits (134), Expect = 4e-06
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = -3
Query: 126 GRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLEE 1
G+QVH H++K GF+ D++ GNSL++MY+KC IDDA +V +
Sbjct: 593 GKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIDDADRVFSK 634
>ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 827
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/59 (47%), Positives = 37/59 (62%)
Frame = -3
Query: 180 FTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
F +P LGRQVH V+K GF+ ++YVGN+LIDMY KC +D+A +VLE
Sbjct: 135 FVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLE 193
>gb|EXC26223.1| hypothetical protein L484_022794 [Morus notabilis]
Length = 605
Score = 49.3 bits (116), Expect(2) = 5e-06
Identities = 26/61 (42%), Positives = 32/61 (52%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
NFTYP G Q+H H KLG DL+V NSLI+MY KC I+ A V +
Sbjct: 131 NFTYPVLLKACARLSATEEGMQIHGHTSKLGLQGDLFVQNSLINMYGKCGKIELACAVFD 190
Query: 3 E 1
+
Sbjct: 191 Q 191
Score = 26.6 bits (57), Expect(2) = 5e-06
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Frame = -2
Query: 373 LGLVRRATTSSHARQVHAQXXXXXXXXXXXXL------CKLAELRSSDYALAVFRRLPSP 212
L L++R + +Q+H Q C L++ S DYA ++FR + P
Sbjct: 35 LSLLKRCKSVRELKQIHVQILKIGLLGDSFCAGNLVATCALSDWGSMDYACSIFRHVKEP 94
>ref|XP_006467747.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Citrus sinensis]
Length = 949
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -3
Query: 126 GRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLEE 1
G+QVH H++K GF+ D + GNSL++MY+KC IDDA + E
Sbjct: 596 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 637
>ref|XP_006449392.1| hypothetical protein CICLE_v10018358mg [Citrus clementina]
gi|557552003|gb|ESR62632.1| hypothetical protein
CICLE_v10018358mg [Citrus clementina]
Length = 942
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = -3
Query: 126 GRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLEE 1
G+QVH H++K GF+ D + GNSL++MY+KC IDDA + E
Sbjct: 589 GKQVHVHIIKFGFMSDTFAGNSLVNMYAKCGSIDDADRAFSE 630
>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 55.8 bits (133), Expect = 6e-06
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = -3
Query: 126 GRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLEE 1
G+Q+H H++K GF+ D++ GNSL++MY+KC IDDA + E
Sbjct: 580 GKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 621
>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 55.8 bits (133), Expect = 6e-06
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = -3
Query: 126 GRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLEE 1
G+Q+H H++K GF+ D++ GNSL++MY+KC IDDA + E
Sbjct: 553 GKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSE 594
>ref|XP_006382294.1| hypothetical protein POPTR_0005s00730g, partial [Populus
trichocarpa] gi|550337649|gb|ERP60091.1| hypothetical
protein POPTR_0005s00730g, partial [Populus trichocarpa]
Length = 670
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
N+TYP +G Q+H VVKLG +LY+GN L+ MY KC +D A +VL+
Sbjct: 131 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 190
Query: 3 E 1
E
Sbjct: 191 E 191
>ref|XP_002330010.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
N+TYP +G Q+H VVKLG +LY+GN L+ MY KC +D A +VL+
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196
Query: 3 E 1
E
Sbjct: 197 E 197
>ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum lycopersicum]
Length = 626
Score = 48.1 bits (113), Expect(2) = 8e-06
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = -3
Query: 183 NFTYPPXXXXXXXXXXXXLGRQVHAHVVKLGFIFDLYVGNSLIDMYSKCLLIDDAHQVLE 4
+FT+PP G+Q+H HVVK GF FD + N+LI MY +++A +V +
Sbjct: 122 SFTFPPLIRVCCIDNAVEEGKQIHGHVVKFGFGFDRFSQNNLIHMYVSFRCLEEAKRVFD 181
Score = 26.9 bits (58), Expect(2) = 8e-06
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 277 CKLAELRSSDYALAVFRRLPSP 212
C ++EL YAL VF +LP P
Sbjct: 64 CAISELGDLSYALQVFDKLPEP 85