BLASTX nr result
ID: Zingiber24_contig00047093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00047093
(295 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003548424.2| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
gb|EPS66960.1| hypothetical protein M569_07818 [Genlisea aurea] 60 4e-07
ref|XP_003529895.2| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_002885157.1| pentatricopeptide repeat-containing protein ... 58 1e-06
emb|CBI35966.3| unnamed protein product [Vitis vinifera] 58 1e-06
emb|CBI27471.3| unnamed protein product [Vitis vinifera] 58 1e-06
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_002510931.1| pentatricopeptide repeat-containing protein,... 58 2e-06
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera] 57 2e-06
ref|XP_006358742.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|ESW28957.1| hypothetical protein PHAVU_002G032000g [Phaseolus... 57 3e-06
gb|ESW07233.1| hypothetical protein PHAVU_010G112400g [Phaseolus... 57 3e-06
gb|EOX98874.1| Tetratricopeptide repeat-like superfamily protein... 57 3e-06
gb|EOY28770.1| Tetratricopeptide repeat-like superfamily protein... 57 3e-06
gb|EOY22925.1| Tetratricopeptide repeat-like superfamily protein... 57 3e-06
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
emb|CBI25349.3| unnamed protein product [Vitis vinifera] 57 3e-06
ref|XP_006853063.1| hypothetical protein AMTR_s00038p00071780 [A... 56 4e-06
ref|XP_006836331.1| hypothetical protein AMTR_s00092p00078040 [A... 56 6e-06
gb|EOY07667.1| Tetratricopeptide repeat-like superfamily protein... 56 6e-06
>ref|XP_003548424.2| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 945
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/66 (39%), Positives = 43/66 (65%)
Frame = -2
Query: 225 RWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCN 46
+W+D L L+R+++++S AT T +L+AC L + G+ IH VI+ G S +S CN
Sbjct: 246 KWEDALELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICN 305
Query: 45 TIMSLY 28
+I+S+Y
Sbjct: 306 SIVSMY 311
>gb|EPS66960.1| hypothetical protein M569_07818 [Genlisea aurea]
Length = 802
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/88 (38%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = -2
Query: 252 SEIGCTSLIR---WQDHLFLYRQLK-NSSLPATSATFPPVLKACANLELFDHGESIHADV 85
S+ G SL+R +++ L LY Q + N + ++ TFP +LKAC +L F +GES+HA V
Sbjct: 23 SDEGIQSLVRNRRYREALKLYSQEQANRNSSSSRYTFPSLLKACTSLLNFRYGESLHASV 82
Query: 84 IKMGFASYSSTCNTIMSLYIKRGATYCA 1
IK GF S + ++++ +Y+ G+ CA
Sbjct: 83 IKAGFYSDAYVVSSLIRMYVASGSLVCA 110
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/76 (38%), Positives = 41/76 (53%)
Frame = -2
Query: 243 GCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFAS 64
GC +++ L+ K +LP S TF L A + +E FD G +H DVIKMGF +
Sbjct: 230 GCCHNGLFENGFQLFISAKREALPLGSTTFSISLTASSQVEQFDFGSQLHCDVIKMGFEN 289
Query: 63 YSSTCNTIMSLYIKRG 16
S C +++SLY G
Sbjct: 290 DSYVCTSLISLYSNYG 305
>ref|XP_003529895.2| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 945
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = -2
Query: 225 RWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCN 46
RW+D L L R+++++S AT T +L+AC L + G+ IH VI+ G S +S CN
Sbjct: 246 RWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICN 305
Query: 45 TIMSLY 28
+I+S+Y
Sbjct: 306 SIVSMY 311
>ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330997|gb|EFH61416.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 655
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = -2
Query: 243 GCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFAS 64
GC R ++ L+ Q+K+S + T +L AC+NL HG S H + G+A
Sbjct: 383 GCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAV 442
Query: 63 YSSTCNTIMSLYIKRGATYCA 1
+S CN +M +Y K G Y A
Sbjct: 443 NTSICNALMDMYTKCGKLYVA 463
>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = -2
Query: 219 QDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCNTI 40
Q+ LFLY ++ SS ++ TFP VLKAC+ L GE IH V+++GF S CN++
Sbjct: 75 QNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSL 134
Query: 39 MSLYIK 22
+ +Y K
Sbjct: 135 IDMYCK 140
>emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = -2
Query: 219 QDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCNTI 40
++ L LY + S+P + TFP +LKAC+++ + + IHA +IKMGF S T N++
Sbjct: 100 EEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSL 159
Query: 39 MSLYIKRG 16
+++Y K G
Sbjct: 160 LNVYSKSG 167
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = -2
Query: 219 QDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCNTI 40
++ L LY + S+P + TFP +LKAC+++ + + IHA +IKMGF S T N++
Sbjct: 100 EEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSL 159
Query: 39 MSLYIKRG 16
+++Y K G
Sbjct: 160 LNVYSKSG 167
>ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550046|gb|EEF51533.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 461
Score = 57.8 bits (138), Expect = 2e-06
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Frame = -2
Query: 261 RDRSEIGCTSLIR-------WQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGE 103
RD S SLI ++D + LY Q+ + TFP VLKAC L L GE
Sbjct: 157 RDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLKACGGLGLIQVGE 216
Query: 102 SIHADVIKMGFASYSSTCNTIMSLYIKRG 16
++H D+I++GFA+ N ++ +Y K G
Sbjct: 217 AVHRDLIRLGFANDRFASNALVDMYAKCG 245
>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/68 (38%), Positives = 43/68 (63%)
Frame = -2
Query: 219 QDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCNTI 40
++ L LY + S+P + TFP +LKAC+++ + + IHA +IKMGF S T N++
Sbjct: 100 EEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSL 159
Query: 39 MSLYIKRG 16
+++Y K G
Sbjct: 160 LNVYSKSG 167
>ref|XP_006358742.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Solanum tuberosum]
Length = 850
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/85 (36%), Positives = 45/85 (52%)
Frame = -2
Query: 270 SILRDRSEIGCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHA 91
+++R SE G W++ + LY KN S TF LKACA E D G IH+
Sbjct: 230 ALIRGLSENGL-----WRNSMRLYSLAKNWGCKLMSTTFSCTLKACAEGEDIDFGRQIHS 284
Query: 90 DVIKMGFASYSSTCNTIMSLYIKRG 16
DV+KM F + C +++S+Y + G
Sbjct: 285 DVVKMDFENDPYVCTSVLSMYARFG 309
>gb|ESW28957.1| hypothetical protein PHAVU_002G032000g [Phaseolus vulgaris]
Length = 518
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = -2
Query: 210 LFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCNTIMSL 31
L LY Q+ ++S+P S TFP +LKAC+ L F+ +HA +IKMGF S N+++
Sbjct: 93 LLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETMQLHAHIIKMGFGSEVYAANSLLRA 152
Query: 30 YIKRGATYCA 1
Y G + A
Sbjct: 153 YAISGNIHSA 162
>gb|ESW07233.1| hypothetical protein PHAVU_010G112400g [Phaseolus vulgaris]
Length = 946
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/66 (36%), Positives = 42/66 (63%)
Frame = -2
Query: 225 RWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCN 46
+W+ L L+R+++++S AT T +L+AC L + G+ +H VIK G S +S CN
Sbjct: 248 KWEKALELFRRMQSASAKATDGTMVKLLQACGKLRALNEGKQLHGYVIKFGRVSNTSICN 307
Query: 45 TIMSLY 28
+++S+Y
Sbjct: 308 SVVSMY 313
>gb|EOX98874.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 742
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = -2
Query: 225 RWQDHLFLYRQLKNSSL-PATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTC 49
+W + Y+++K + P+ + FPP+LKAC NL D G+S+HA +IK G+ S++S
Sbjct: 27 KWLEVFSHYQEMKRYGVHPSDPSVFPPILKACLNLSPTD-GKSVHACLIKQGYQSFASIG 85
Query: 48 NTIMSLYIKRG 16
N+I+ Y+K G
Sbjct: 86 NSIVDFYMKCG 96
>gb|EOY28770.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 1250
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/90 (40%), Positives = 50/90 (55%)
Frame = -2
Query: 279 SAKSILRDRSEIGCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGES 100
S SI+ + S G + + L Y + NSS P S TFP +LKAC +L LF G S
Sbjct: 14 SFNSIINNLSSQGS-----YHEVLVTYTTMLNSSTP-DSYTFPSLLKACTSLNLFSIGLS 67
Query: 99 IHADVIKMGFASYSSTCNTIMSLYIKRGAT 10
+H VI GF+S S T +++++ Y K G T
Sbjct: 68 VHQQVILRGFSSDSYTASSLINFYSKFGHT 97
>gb|EOY22925.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 773
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = -2
Query: 243 GCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFAS 64
G L +++D L +Y Q++ + TFP LKACA + L GE++H DV++ GF +
Sbjct: 417 GYAELGQYEDALAIYFQMEEEGVEPDRYTFPRALKACAGIGLIQIGEAVHRDVVRKGFGN 476
Query: 63 YSSTCNTIMSLYIKRG 16
N ++ +Y K G
Sbjct: 477 DGFVLNALIDMYAKCG 492
>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = -2
Query: 222 WQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCNT 43
W+ L LY KN + SA+F AC++ E+ D G +H DVIKM F C +
Sbjct: 225 WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTS 284
Query: 42 IMSLYIKRGA 13
++++Y K G+
Sbjct: 285 LLTMYAKSGS 294
>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/70 (35%), Positives = 38/70 (54%)
Frame = -2
Query: 222 WQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCNT 43
W+ L LY KN + SA+F AC++ E+ D G +H DVIKM F C +
Sbjct: 630 WEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTS 689
Query: 42 IMSLYIKRGA 13
++++Y K G+
Sbjct: 690 LLTMYAKSGS 699
>ref|XP_006853063.1| hypothetical protein AMTR_s00038p00071780 [Amborella trichopoda]
gi|548856702|gb|ERN14530.1| hypothetical protein
AMTR_s00038p00071780 [Amborella trichopoda]
Length = 714
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/78 (33%), Positives = 44/78 (56%)
Frame = -2
Query: 246 IGCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFA 67
+G T L RW++ L + +++ + T VL CA L + G+ +HA V + GF+
Sbjct: 365 VGYTQLCRWEEGLDFFSKMRREACEIDHVTLGLVLNICAGLTDLELGKQVHAFVNRHGFS 424
Query: 66 SYSSTCNTIMSLYIKRGA 13
SY TCN+++ +Y K G+
Sbjct: 425 SYLFTCNSLLDMYGKCGS 442
>ref|XP_006836331.1| hypothetical protein AMTR_s00092p00078040 [Amborella trichopoda]
gi|548838849|gb|ERM99184.1| hypothetical protein
AMTR_s00092p00078040 [Amborella trichopoda]
Length = 716
Score = 55.8 bits (133), Expect = 6e-06
Identities = 28/85 (32%), Positives = 51/85 (60%)
Frame = -2
Query: 270 SILRDRSEIGCTSLIRWQDHLFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHA 91
+I+R+ S G + + L LYR++ +S+ FP VLK+C+ + F +GE IH+
Sbjct: 95 TIIRNHSNNGL-----FDEILQLYRRIFVNSMYPDEFAFPFVLKSCSYVLAFQYGEKIHS 149
Query: 90 DVIKMGFASYSSTCNTIMSLYIKRG 16
D++K+G+ S+ + ++ LY+K G
Sbjct: 150 DIVKLGYESFVFVSSALLHLYLKAG 174
>gb|EOY07667.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao]
Length = 516
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/66 (40%), Positives = 36/66 (54%)
Frame = -2
Query: 210 LFLYRQLKNSSLPATSATFPPVLKACANLELFDHGESIHADVIKMGFASYSSTCNTIMSL 31
L LY +KN +L T +L+AC G S H VI+MGF SYS CN ++S+
Sbjct: 203 LELYNMMKNLTLKPNDFTLTSLLRACTGSGALGQGRSAHCQVIQMGFDSYSYICNALISM 262
Query: 30 YIKRGA 13
Y K G+
Sbjct: 263 YCKCGS 268