BLASTX nr result

ID: Zingiber24_contig00047052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047052
         (296 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521899.1| PREDICTED: UPF0187 protein At3g61320, chloro...    56   6e-06

>ref|XP_003521899.1| PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Glycine
           max]
          Length = 446

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
 Frame = +1

Query: 112 FAPRIPL----------TPRAPHILCSSSDPPTDAEAPSLVRFLRSFPDWTDAVKELGVR 261
           F P+ PL           P  P I  S    PT   A +L+  LRS PDW DAV+E G++
Sbjct: 53  FTPKCPLHQNILLLPSWKPAKPTISASLPPGPTSGPAQTLISLLRSIPDWADAVQERGMQ 112

Query: 262 KRRHLYTPDDW 294
           K+R LYT  +W
Sbjct: 113 KKRALYTHQNW 123


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