BLASTX nr result
ID: Zingiber24_contig00047036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00047036
(321 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003562444.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 69 9e-10
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 62 6e-08
emb|CBI25341.3| unnamed protein product [Vitis vinifera] 62 6e-08
gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP bindin... 62 8e-08
gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP bindin... 62 8e-08
emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera] 62 8e-08
gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japo... 60 2e-07
gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indi... 60 2e-07
gb|EMS68913.1| E3 ubiquitin-protein ligase SHPRH [Triticum urartu] 60 4e-07
ref|XP_006658968.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 59 5e-07
ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [S... 56 4e-06
>ref|XP_003562444.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Brachypodium
distachyon]
Length = 1198
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +1
Query: 67 THDDGTFSHFSSDSKKTSPESDAPCHVSSGCYAIPCLRKTCETIKQKYLSAFVMKLSLAQ 246
T +D + +S S + ++D+ CH SS C+A CLRKTC T+K+KYLSAF KL +AQ
Sbjct: 479 TSEDNNLTGQASTSVELDADNDSGCHSSSECFADGCLRKTCNTLKEKYLSAFATKLLIAQ 538
Query: 247 EEFKTSSMQV 276
++F S +V
Sbjct: 539 KDFNASLEEV 548
>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
Length = 1704
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +1
Query: 88 SHFSSDSKKTSPESDAPCHVSSGCYAIPCLRKTCETIKQKYLSAFVMKLSLAQEEFKTSS 267
S+ S D + E DA H+SS + CLR TCE IKQK+LS F KLS+AQ+E K S
Sbjct: 948 SNLSEDGVNDNIECDAEPHISSRLFNDGCLRTTCENIKQKFLSLFSSKLSVAQQELKKSY 1007
Query: 268 MQV 276
MQV
Sbjct: 1008 MQV 1010
>emb|CBI25341.3| unnamed protein product [Vitis vinifera]
Length = 1717
Score = 62.4 bits (150), Expect = 6e-08
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +1
Query: 88 SHFSSDSKKTSPESDAPCHVSSGCYAIPCLRKTCETIKQKYLSAFVMKLSLAQEEFKTSS 267
S+ S D + E DA H+SS + CLR TCE IKQK+LS F KLS+AQ+E K S
Sbjct: 973 SNLSEDGVNDNIECDAEPHISSRLFNDGCLRTTCENIKQKFLSLFSSKLSVAQQELKKSY 1032
Query: 268 MQV 276
MQV
Sbjct: 1033 MQV 1035
>gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 2 [Theobroma cacao]
Length = 1666
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/91 (37%), Positives = 52/91 (57%)
Frame = +1
Query: 4 KTNMDCKPVFTRQDSSLEQHNTHDDGTFSHFSSDSKKTSPESDAPCHVSSGCYAIPCLRK 183
++++ + ++ +++S + N D S S + +S+ CHVSSG LR
Sbjct: 904 QSSVKSQKLYDQENSEINAGNLPDIA--SDLSENGINNDQDSNGQCHVSSGTLNKQSLRI 961
Query: 184 TCETIKQKYLSAFVMKLSLAQEEFKTSSMQV 276
CE +KQ+YLSAF KLS AQ+EF+ S MQV
Sbjct: 962 DCENLKQRYLSAFTTKLSAAQQEFRKSYMQV 992
>gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 1 [Theobroma cacao]
Length = 1682
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/91 (37%), Positives = 52/91 (57%)
Frame = +1
Query: 4 KTNMDCKPVFTRQDSSLEQHNTHDDGTFSHFSSDSKKTSPESDAPCHVSSGCYAIPCLRK 183
++++ + ++ +++S + N D S S + +S+ CHVSSG LR
Sbjct: 920 QSSVKSQKLYDQENSEINAGNLPDIA--SDLSENGINNDQDSNGQCHVSSGTLNKQSLRI 977
Query: 184 TCETIKQKYLSAFVMKLSLAQEEFKTSSMQV 276
CE +KQ+YLSAF KLS AQ+EF+ S MQV
Sbjct: 978 DCENLKQRYLSAFTTKLSAAQQEFRKSYMQV 1008
>emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera]
Length = 1111
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +1
Query: 88 SHFSSDSKKTSPESDAPCHVSSGCYAIPCLRKTCETIKQKYLSAFVMKLSLAQEEFKTSS 267
S+ S D + E DA H+SS + CLR TCE IKQK+LS F KLS+AQ+E K S
Sbjct: 1005 SNLSEDGVNDNIECDAEPHISSRLFNDGCLRTTCENIKQKFLSLFSSKLSVAQQEXKKSY 1064
Query: 268 MQV 276
MQV
Sbjct: 1065 MQV 1067
>gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group]
Length = 1663
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +1
Query: 37 RQDSSLEQHNTHDDGTFSHFSSDSKKTSPESDAPCHVSSGCYAIPCLRKTCETIKQKYLS 216
++ S + + +D + S++ E+D+ CH SS C A CL+ TC +I++KYLS
Sbjct: 909 KETSPADSETSKEDKNINTQVCGSEEMDVENDSGCHTSSVCLADGCLKNTCNSIREKYLS 968
Query: 217 AFVMKLSLAQEEFKTSSMQV 276
F KL +AQ++F S +V
Sbjct: 969 VFTSKLLIAQKDFSASFTEV 988
>gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indica Group]
Length = 1547
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +1
Query: 37 RQDSSLEQHNTHDDGTFSHFSSDSKKTSPESDAPCHVSSGCYAIPCLRKTCETIKQKYLS 216
++ S + + +D + S++ E+D+ CH SS C A CL+ TC +I++KYLS
Sbjct: 793 KETSPADSETSKEDKNINTQVCGSEEMDVENDSGCHTSSVCLADGCLKNTCNSIREKYLS 852
Query: 217 AFVMKLSLAQEEFKTSSMQV 276
F KL +AQ++F S +V
Sbjct: 853 VFTSKLLIAQKDFSASFTEV 872
>gb|EMS68913.1| E3 ubiquitin-protein ligase SHPRH [Triticum urartu]
Length = 1499
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +1
Query: 97 SSDSKKTSPESDAPCHVSSGCYAIPCLRKTCETIKQKYLSAFVMKLSLAQEEFKTSSMQV 276
+S S + E+ CH+SS C+A CLRK C T+K+KYLS F KL +AQ++F S +V
Sbjct: 787 ASISVELDAENRTGCHLSSECFADGCLRKKCNTLKEKYLSVFTTKLLIAQKDFSASFEEV 846
>ref|XP_006658968.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Oryza brachyantha]
Length = 1650
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +1
Query: 106 SKKTSPESDAPCHVSSGCYAIPCLRKTCETIKQKYLSAFVMKLSLAQEEFKTSSMQV 276
+++ E+D+ CH SS C A CL+KTC +I++KYLS F KL +AQ++F S +V
Sbjct: 922 NREMDVENDSGCHSSSVCLADSCLKKTCNSIREKYLSVFTSKLLIAQKDFSASFTEV 978
>ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [Sorghum bicolor]
gi|241926774|gb|EER99918.1| hypothetical protein
SORBIDRAFT_02g043040 [Sorghum bicolor]
Length = 1475
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +1
Query: 124 ESDAPCHVSSGCYAIPCLRKTCETIKQKYLSAFVMKLSLAQEEFKTS 264
E+ A CH SS C+A CLRKTC I +KYLS F KL +AQ++F S
Sbjct: 912 ENVAGCHSSSECFANDCLRKTCNEITEKYLSVFTSKLVVAQKDFNAS 958