BLASTX nr result
ID: Zingiber24_contig00047031
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00047031
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 157 1e-36
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 155 5e-36
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 155 5e-36
gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aeg... 150 2e-34
dbj|BAK03274.1| predicted protein [Hordeum vulgare subsp. vulgare] 149 3e-34
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 149 5e-34
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 146 3e-33
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 146 3e-33
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 145 5e-33
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 141 1e-31
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 134 1e-29
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 132 6e-29
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 131 8e-29
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 130 1e-28
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 130 1e-28
gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 130 2e-28
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 130 2e-28
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 130 2e-28
gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Tri... 129 3e-28
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus... 128 9e-28
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 157 bits (398), Expect = 1e-36
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y ++RPV NGLLDTRMGAANK G CSTCHG+F ECPGHFGYLKL LPVFNVG+FN IL+
Sbjct: 51 YNQEMRPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPKA 275
+LKCICK C R+LLVE DR FLKKMRNPKA
Sbjct: 111 VLKCICKGCSRVLLVEKDRLEFLKKMRNPKA 141
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 155 bits (392), Expect = 5e-36
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y +++PV NGLLDTRMGAANK G CSTCHG+F ECPGHFGYLKL LPVFNVG+FN IL+
Sbjct: 51 YNHEMKPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPKA 275
+LKCICK C R+LL+E DR FLKKMRNPKA
Sbjct: 111 VLKCICKSCSRVLLMEKDRLEFLKKMRNPKA 141
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 155 bits (392), Expect = 5e-36
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y +++PV NGLLDTRMGAANK G CSTCHG+F ECPGHFGYLKL LPVFNVG+FN IL+
Sbjct: 51 YNHEMKPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPKA 275
+LKCICK C R+LL+E DR FLKKMRNPKA
Sbjct: 111 VLKCICKSCSRVLLMEKDRLEFLKKMRNPKA 141
>gb|EMT01541.1| DNA-directed RNA polymerase III subunit RPC1 [Aegilops tauschii]
Length = 1117
Score = 150 bits (379), Expect = 2e-34
Identities = 64/91 (70%), Positives = 78/91 (85%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y +++P NGLLDTRMGAANK G C TCHG++TECPGHFGYLKL LPVFN+G+FN+IL+
Sbjct: 25 YEPNMKPAPNGLLDTRMGAANKQGECGTCHGSYTECPGHFGYLKLALPVFNIGFFNNILD 84
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPKA 275
++KCICK C R+LLVE DR+ FLKKMR P+A
Sbjct: 85 VVKCICKGCSRVLLVEKDRREFLKKMRQPRA 115
>dbj|BAK03274.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 168
Score = 149 bits (377), Expect = 3e-34
Identities = 65/87 (74%), Positives = 76/87 (87%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
YG D++PV NGLLDTRMGAANK G C TCHG++TECPGHFGYLKL LPVFNVG+FN+IL+
Sbjct: 32 YGPDMKPVPNGLLDTRMGAANKQGDCGTCHGSYTECPGHFGYLKLALPVFNVGFFNNILD 91
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMR 263
++KCICK C R+LLVE DR+ FLKK R
Sbjct: 92 VVKCICKGCSRVLLVEKDRREFLKKAR 118
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 149 bits (375), Expect = 5e-34
Identities = 65/91 (71%), Positives = 75/91 (82%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
YG D++PV NGLLD RMG NK CSTCHG F++CPGHFGYLKL LPVFNVG+FN IL+
Sbjct: 51 YGHDMKPVPNGLLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPKA 275
+LKCICK C R+LL E DR+ FLKKMRNP+A
Sbjct: 111 VLKCICKSCSRVLLFEKDRREFLKKMRNPRA 141
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 146 bits (368), Expect = 3e-33
Identities = 63/91 (69%), Positives = 74/91 (81%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y D+ PV NGLLD RMG K G C+TCHG F++CPGHFGYLKL LPVFNVG+FN IL+
Sbjct: 51 YDRDMTPVPNGLLDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPKA 275
+LKCICK C R+LL+E DR+ FLKKMRNP+A
Sbjct: 111 VLKCICKSCSRVLLIEKDRREFLKKMRNPRA 141
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 146 bits (368), Expect = 3e-33
Identities = 65/90 (72%), Positives = 77/90 (85%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
YG D++PV NGLLD RMGAANK G C+TCHG++ ECPGHFGYLKL LPVFNVG+FN+IL+
Sbjct: 51 YGNDMKPVPNGLLDPRMGAANKFGECATCHGSYHECPGHFGYLKLVLPVFNVGFFNNILD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
+LK ICK C RILL E D++ FLKKMRNP+
Sbjct: 111 VLKSICKGCSRILLHEKDQREFLKKMRNPR 140
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 145 bits (366), Expect = 5e-33
Identities = 63/91 (69%), Positives = 76/91 (83%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y + L+PV NGLLD RMGA++K G C+TCHG++TECPGHFGY+KL LPVFNVGYFN IL
Sbjct: 54 YDSSLKPVPNGLLDPRMGASDKCGECATCHGSYTECPGHFGYIKLALPVFNVGYFNKILA 113
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPKA 275
+LKCICK C R+LL E+ + FLKKMRNP+A
Sbjct: 114 VLKCICKGCSRVLLTENIHQEFLKKMRNPRA 144
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Setaria italica]
Length = 1397
Score = 141 bits (355), Expect = 1e-31
Identities = 65/94 (69%), Positives = 74/94 (78%), Gaps = 3/94 (3%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGV---CSTCHGNFTECPGHFGYLKLTLPVFNVGYFNS 173
Y D++PV NGLLD RMG A+K CSTCHG F ECPGHFGYLKL LPVFNVG+FN
Sbjct: 51 YEHDMKPVPNGLLDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNC 110
Query: 174 ILNILKCICKVCGRILLVEDDRKAFLKKMRNPKA 275
IL++LKCICK C R+LL E DR+ FLKKMRNP+A
Sbjct: 111 ILDVLKCICKGCSRVLLAEKDRREFLKKMRNPRA 144
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 134 bits (337), Expect = 1e-29
Identities = 58/90 (64%), Positives = 70/90 (77%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y A+ +PV NGLLD RMG NK VC TCHGNF ECPGH+GYL L LPV+NVGY ++I++
Sbjct: 44 YDANKKPVSNGLLDMRMGPPNKRSVCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVD 103
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
ILKCICK C R+LL E + FL+KMRNP+
Sbjct: 104 ILKCICKNCSRVLLEEKEHHGFLRKMRNPR 133
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 132 bits (331), Expect = 6e-29
Identities = 56/90 (62%), Positives = 70/90 (77%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y + +P+QNGLLD RMG NK+G C TCHGNF ECPGH+GYL L LPV+NVGY ++++
Sbjct: 51 YESTKKPIQNGLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
ILKCICK C ILL + +R+ LKKMRNP+
Sbjct: 111 ILKCICKCCSSILLDDKERRDILKKMRNPR 140
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 131 bits (330), Expect = 8e-29
Identities = 56/88 (63%), Positives = 73/88 (82%)
Frame = +3
Query: 12 DLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILNILK 191
DL+P ++G+LDTRMG + K+G C+TC G+F CPGHFGYLKL LPVF+VGYF + + +L+
Sbjct: 55 DLKPAEHGVLDTRMGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQ 114
Query: 192 CICKVCGRILLVEDDRKAFLKKMRNPKA 275
CICK C RILL E++RK FLKK+RNP+A
Sbjct: 115 CICKSCARILLFEEERKQFLKKIRNPRA 142
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 130 bits (328), Expect = 1e-28
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y + +P+QNGLLD RMG NK G C TCHGNF ECPGH+GYL L LPV+NVGY ++++
Sbjct: 51 YESTKKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
ILKCICK C ILL + +R+ LKKMRNP+
Sbjct: 111 ILKCICKCCSSILLDDKERRDILKKMRNPR 140
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 130 bits (328), Expect = 1e-28
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y + +P+QNGLLD RMG NK G C TCHGNF ECPGH+GYL L LPV+NVGY ++++
Sbjct: 51 YESTKKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
ILKCICK C ILL + +R+ LKKMRNP+
Sbjct: 111 ILKCICKCCSSILLDDKERRDILKKMRNPR 140
>gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 232
Score = 130 bits (327), Expect = 2e-28
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y + +PV++GLLD RMG ANK C+TCHG F++CPGH+GYLKL LPV+NVGY ++IL+
Sbjct: 54 YDPNRKPVEDGLLDPRMGPANKFSECATCHGRFSDCPGHYGYLKLALPVYNVGYLSTILD 113
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
ILKCICK C RILL E RK FLKKMR+ K
Sbjct: 114 ILKCICKSCSRILLDEKLRKDFLKKMRSSK 143
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 130 bits (327), Expect = 2e-28
Identities = 57/90 (63%), Positives = 71/90 (78%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y RP++ GLLD RMG ANK+G C+TCHGNF +CPGH+GYL L LPV+NVGY ++IL+
Sbjct: 46 YDPKSRPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILD 105
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
ILKCICK C RI+L E K +LK+MR+PK
Sbjct: 106 ILKCICKSCSRIILDEKLCKDYLKRMRSPK 135
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 130 bits (327), Expect = 2e-28
Identities = 57/90 (63%), Positives = 72/90 (80%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y A+ + + GLLDTRMGA NK G C TC G+FT+CPGHFGYL L LPV+NVGY ++IL+
Sbjct: 51 YDANKKAIVGGLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILD 110
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
ILKCICK C R+L+ E RK++LK+MRNP+
Sbjct: 111 ILKCICKSCSRVLVDEKLRKSYLKRMRNPR 140
>gb|EMS65169.1| DNA-directed RNA polymerase III subunit rpc1 [Triticum urartu]
Length = 1248
Score = 129 bits (325), Expect = 3e-28
Identities = 58/89 (65%), Positives = 70/89 (78%)
Frame = +3
Query: 9 ADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILNIL 188
A+L + G GAANK G C TCHG++TECPGHFGYLKL LPVFNVG+FN+IL+++
Sbjct: 56 AELHAIMEG------GAANKQGECGTCHGSYTECPGHFGYLKLALPVFNVGFFNNILDVV 109
Query: 189 KCICKVCGRILLVEDDRKAFLKKMRNPKA 275
KCICK C R+LLVE DR+ FLKKMR P+A
Sbjct: 110 KCICKGCSRVLLVEKDRREFLKKMRQPRA 138
>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 128 bits (321), Expect = 9e-28
Identities = 59/90 (65%), Positives = 68/90 (75%)
Frame = +3
Query: 3 YGADLRPVQNGLLDTRMGAANKAGVCSTCHGNFTECPGHFGYLKLTLPVFNVGYFNSILN 182
Y + +P+ GLLD RMG ANK+ C+TCHGNF +CPGH+GYL L LPVFNVGY SI+
Sbjct: 52 YDSFKKPIHGGLLDPRMGPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVE 111
Query: 183 ILKCICKVCGRILLVEDDRKAFLKKMRNPK 272
ILKCICK C RILL ED RK LKKMR+ K
Sbjct: 112 ILKCICKGCARILLDEDTRKKHLKKMRSSK 141