BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00047012
         (285 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|54035746...   146   3e-33
gb|AER00544.1| ORF III [Citrus yellow mosaic virus]                   145   5e-33
gb|AER00538.1| ORF III [Citrus yellow mosaic virus]                   145   5e-33
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               145   5e-33
gb|ACH86210.1| unknown [Citrus yellow mosaic virus]                   145   5e-33
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]               145   5e-33
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16...   145   5e-33
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...   144   9e-33
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|...   143   2e-32
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s...   143   2e-32
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]               143   3e-32
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|3478...   142   3e-32
emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]               142   3e-32
emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]               142   3e-32
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]               142   3e-32
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]               142   3e-32
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               142   6e-32
gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]                136   2e-30
emb|CAA64269.1| unnamed protein product [Dioscorea bacilliform v...   129   3e-28
emb|CAA64266.1| unnamed protein product [Dioscorea bacilliform v...   128   7e-28

>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] gi|540357465|gb|AGV08293.1| ORF3
           [Piper yellow mottle virus]
          Length = 1925

 Score =  146 bits (368), Expect = 3e-33
 Identities = 65/94 (69%), Positives = 79/94 (84%)
 Frame = -1

Query: 282 ILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMVG 103
           I+ATMEVDLT G QM+Y+IP+ MMT+ DFY N+ IS+LTRGYE WQ+ EANLL+TRGM+G
Sbjct: 159 IIATMEVDLTKGCQMVYIIPDIMMTVNDFYHNIHISVLTRGYEGWQHGEANLLVTRGMIG 218

Query: 102 RLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           RLSNT NVGFAY++Q VVDY  +HGV ALPG  +
Sbjct: 219 RLSNTPNVGFAYDIQEVVDYFITHGVNALPGAKY 252


>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
          Length = 1976

 Score =  145 bits (366), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATME+DLT G QM+Y+IP+TMMT+ DF RNVQISILT+GY  WQN EANLL+TRG+V
Sbjct: 174 SIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEANLLVTRGIV 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NV FAY++Q V DYL SHG++ALPGR +
Sbjct: 234 GRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRY 268


>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
          Length = 1982

 Score =  145 bits (366), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATME+DLT G QM+Y+IP+TMMT+ DF RNVQISILT+GY  WQN EANLL+TRG+V
Sbjct: 174 SIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEANLLVTRGIV 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NV FAY++Q V DYL SHG++ALPGR +
Sbjct: 234 GRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRY 268


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  145 bits (366), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATME+DLT G QM+Y+IP+TMMT+ DF RNVQISILT+GY  WQN EANLL+TRG+V
Sbjct: 174 SIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEANLLVTRGIV 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NV FAY++Q V DYL SHG++ALPGR +
Sbjct: 234 GRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRY 268


>gb|ACH86210.1| unknown [Citrus yellow mosaic virus]
          Length = 463

 Score =  145 bits (366), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATME+DLT G QM+Y+IP+TMMT+ DF RNVQISILT+GY  WQN EANLL+TRG+V
Sbjct: 174 SIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEANLLVTRGIV 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NV FAY++Q V DYL SHG++ALPGR +
Sbjct: 234 GRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRY 268


>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1979

 Score =  145 bits (366), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATME+DLT G QM+Y+IP+TMMT+ DF RNVQISILT+GY  WQN EANLL+TRG+V
Sbjct: 174 SIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEANLLVTRGIV 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NV FAY++Q V DYL SHG++ALPGR +
Sbjct: 234 GRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRY 268


>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
           gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
           yellow mosaic virus]
          Length = 1983

 Score =  145 bits (366), Expect = 5e-33
 Identities = 67/95 (70%), Positives = 81/95 (85%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATME+DLT G QM+Y+IP+TMMT+ DF RNVQISILT+GY  WQN EANLL+TRG+V
Sbjct: 174 SIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEANLLVTRGIV 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NV FAY++Q V DYL SHG++ALPGR +
Sbjct: 234 GRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRY 268


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
           gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
           bacilliform virus GD1]
          Length = 1892

 Score =  144 bits (364), Expect = 9e-33
 Identities = 69/95 (72%), Positives = 80/95 (84%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATMEVDLT G Q+IYV+P+TMMTIGDF RN+QISILTRGY  WQN EANLL+TRG+V
Sbjct: 178 SIFATMEVDLTEGRQIIYVVPDTMMTIGDFARNIQISILTRGYSNWQNGEANLLVTRGIV 237

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NV FAYE+  V DYLTS GV+A+ GR +
Sbjct: 238 GRLSNTPNVAFAYEIGNVTDYLTSQGVQAIAGRRY 272


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
           polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  143 bits (361), Expect = 2e-32
 Identities = 70/95 (73%), Positives = 77/95 (81%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I A  EVDLT GSQ++YVIP+TMM IGDFYRNVQISI T GYE WQN EANLLITRGM 
Sbjct: 176 SIFAISEVDLTRGSQIVYVIPDTMMIIGDFYRNVQISIQTSGYENWQNGEANLLITRGMT 235

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NVGFAY +  V DYL S GV+ALPGR +
Sbjct: 236 GRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRY 270


>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot virus]
          Length = 1868

 Score =  143 bits (361), Expect = 2e-32
 Identities = 66/93 (70%), Positives = 79/93 (84%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I A ME+DLT GSQ+++V+P+TMMTIGDF RNVQ+SILTRGYE+WQN EANLLITRGM 
Sbjct: 174 SIFAQMEIDLTKGSQLVFVVPDTMMTIGDFARNVQLSILTRGYESWQNGEANLLITRGMT 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NV FAY++    DYL SHGVKA+ G+
Sbjct: 234 GRLSNTPNVAFAYQIASATDYLASHGVKAIAGK 266


>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1976

 Score =  143 bits (360), Expect = 3e-32
 Identities = 66/95 (69%), Positives = 80/95 (84%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATME+DLT G QM+Y+IP+TMMT+ DF RNVQISILT+ Y  WQN EANLL+TRG+V
Sbjct: 174 SIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKAYGNWQNGEANLLVTRGIV 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT NV FAY++Q V DYL SHG++ALPGR +
Sbjct: 234 GRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRY 268


>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] gi|347871|gb|AAA03171.1|
           polyprotein [Cacao swollen shoot virus]
          Length = 1834

 Score =  142 bits (359), Expect = 3e-32
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I A ME+DLT GSQ+++VIP+TMMTIGDF RNVQ+SILTRGYE WQN EANLLITRGM 
Sbjct: 175 SIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEANLLITRGMT 234

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NV FAY++    DYL SHGVKA+ G+
Sbjct: 235 GRLSNTPNVAFAYQIASATDYLASHGVKAIAGK 267


>emb|CAE76628.1| polyprotein [Cacao swollen shoot virus]
          Length = 1847

 Score =  142 bits (359), Expect = 3e-32
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I A ME+DLT GSQ+++VIP+TMMTIGDF RNVQ+SILTRGYE WQN EANLLITRGM 
Sbjct: 175 SIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEANLLITRGMT 234

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NV FAY++    DYL SHGVKA+ G+
Sbjct: 235 GRLSNTPNVAFAYQIASATDYLASHGVKAIAGK 267


>emb|CAE81285.1| polyprotein [Cacao swollen shoot virus]
          Length = 1770

 Score =  142 bits (359), Expect = 3e-32
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I A ME+DLT GSQ+++VIP+TMMTIGDF RNVQ+SILTRGYE WQN EANLLITRGM 
Sbjct: 98  SIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEANLLITRGMT 157

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NV FAY++    DYL SHGVKA+ G+
Sbjct: 158 GRLSNTPNVAFAYQIASATDYLASHGVKAIAGK 190


>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
          Length = 1816

 Score =  142 bits (359), Expect = 3e-32
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I A ME+DLT GSQ+++VIP+TMMTIGDF RNVQ+SILTRGYE WQN EANLLITRGM 
Sbjct: 175 SIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEANLLITRGMT 234

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NV FAY++    DYL SHGVKA+ G+
Sbjct: 235 GRLSNTPNVAFAYQIASATDYLASHGVKAIAGK 267


>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
          Length = 1839

 Score =  142 bits (359), Expect = 3e-32
 Identities = 67/93 (72%), Positives = 78/93 (83%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I A ME+DLT GSQ+++VIP+TMMTIGDF RNVQ+SILTRGYE WQN EANLLITRGM 
Sbjct: 175 SIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEANLLITRGMT 234

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NV FAY++    DYL SHGVKA+ G+
Sbjct: 235 GRLSNTPNVAFAYQIASATDYLASHGVKAIAGK 267


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  142 bits (357), Expect = 6e-32
 Identities = 66/95 (69%), Positives = 80/95 (84%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +I ATME+DLT G QM+Y+IP+TMMT+ DF RNVQISILT+GY  WQN EANLL+TRG+V
Sbjct: 174 SIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGYGNWQNGEANLLVTRGIV 233

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGRSF 1
           GRLSNT  V FAY++Q V DYL SHG++ALPGR +
Sbjct: 234 GRLSNTPIVAFAYQIQNVTDYLVSHGIQALPGRRY 268


>gb|AFM82591.1| polyprotein [Cacao swollen shoot virus]
          Length = 1872

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/93 (68%), Positives = 76/93 (81%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           AI A MEVDLT GSQ+++V+P+TMMTIGDF RNVQ+SILTRGY+ WQN EANLL+TR M 
Sbjct: 175 AIFAQMEVDLTKGSQLVFVVPDTMMTIGDFARNVQLSILTRGYDNWQNGEANLLVTRSMT 234

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NV FA ++    DYL SHGVKA+ G+
Sbjct: 235 GRLSNTPNVAFACQIASATDYLASHGVKAIAGK 267


>emb|CAA64269.1| unnamed protein product [Dioscorea bacilliform virus]
          Length = 547

 Score =  129 bits (325), Expect = 3e-28
 Identities = 57/93 (61%), Positives = 77/93 (82%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +++A MEVDLT GSQM+Y+ P+ +  + DFY N+QISILT+GY+ +QNSEANLLIT+G+V
Sbjct: 165 SMIAKMEVDLTRGSQMVYIAPKVIKRLSDFYNNIQISILTKGYDDYQNSEANLLITKGLV 224

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NVGFAY + G+ DY  +HGV+A+ G+
Sbjct: 225 GRLSNTSNVGFAYSITGITDYFVTHGVQAIKGQ 257


>emb|CAA64266.1| unnamed protein product [Dioscorea bacilliform virus]
          Length = 551

 Score =  128 bits (322), Expect = 7e-28
 Identities = 57/93 (61%), Positives = 76/93 (81%)
 Frame = -1

Query: 285 AILATMEVDLTHGSQMIYVIPETMMTIGDFYRNVQISILTRGYEAWQNSEANLLITRGMV 106
           +++A MEVDLT GSQM+Y+ P  +  + DFY N+QISILT+GY+ +QNSEANLLIT+G+V
Sbjct: 165 SMIAKMEVDLTRGSQMVYIAPNLIKRLTDFYNNIQISILTKGYDDYQNSEANLLITKGLV 224

Query: 105 GRLSNTRNVGFAYEMQGVVDYLTSHGVKALPGR 7
           GRLSNT NVGFAY + G+ DY  +HGV+A+ G+
Sbjct: 225 GRLSNTSNVGFAYSISGITDYFVTHGVQAIKGQ 257