BLASTX nr result
ID: Zingiber24_contig00046814
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046814
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY31658.1| RING/U-box superfamily protein, putative isoform ... 102 4e-20
gb|EOY31654.1| RING/U-box superfamily protein isoform 1 [Theobro... 102 4e-20
ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 100 2e-19
ref|XP_004502170.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 100 2e-19
ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250... 100 3e-19
gb|EMJ06582.1| hypothetical protein PRUPE_ppa007335mg [Prunus pe... 99 6e-19
ref|XP_002303979.2| zinc finger family protein [Populus trichoca... 99 7e-19
ref|XP_006829824.1| hypothetical protein AMTR_s00119p00089020 [A... 99 7e-19
emb|CBI16568.3| unnamed protein product [Vitis vinifera] 99 7e-19
ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 98 1e-18
ref|XP_003601604.1| RING finger protein [Medicago truncatula] gi... 97 2e-18
ref|XP_006445556.1| hypothetical protein CICLE_v10015642mg [Citr... 96 5e-18
ref|XP_002297615.2| hypothetical protein POPTR_0001s03880g [Popu... 96 5e-18
gb|EXC04259.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 95 1e-17
ref|XP_006348226.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 95 1e-17
ref|XP_006348225.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 95 1e-17
ref|XP_006348224.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 95 1e-17
ref|XP_006279491.1| hypothetical protein CARUB_v10026533mg [Caps... 95 1e-17
ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyra... 94 1e-17
ref|XP_002523395.1| zinc finger protein, putative [Ricinus commu... 94 2e-17
>gb|EOY31658.1| RING/U-box superfamily protein, putative isoform 5, partial
[Theobroma cacao]
Length = 310
Score = 102 bits (255), Expect = 4e-20
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QGS D+ SLGDYF+GPGLD+LLQHLA+ND
Sbjct: 157 ERVILIN-PFNQTIIVQGSYDSNQGGQNQNSNHI---GSLGDYFVGPGLDLLLQHLAEND 212
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KEAI+A+PTV+IEE
Sbjct: 213 PNRYGTPPAQKEAIEAMPTVKIEE 236
>gb|EOY31654.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
gi|508784399|gb|EOY31655.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784400|gb|EOY31656.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784401|gb|EOY31657.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
Length = 367
Score = 102 bits (255), Expect = 4e-20
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QGS D+ SLGDYF+GPGLD+LLQHLA+ND
Sbjct: 157 ERVILIN-PFNQTIIVQGSYDSNQGGQNQNSNHI---GSLGDYFVGPGLDLLLQHLAEND 212
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KEAI+A+PTV+IEE
Sbjct: 213 PNRYGTPPAQKEAIEAMPTVKIEE 236
>ref|XP_004294935.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470117588|ref|XP_004294936.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470117590|ref|XP_004294937.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Fragaria vesca subsp. vesca]
Length = 375
Score = 100 bits (250), Expect = 2e-19
Identities = 52/84 (61%), Positives = 61/84 (72%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E LI+IN PFNQ IIL GS D+ SLGDYFIGPGLD+LLQHLA+ND
Sbjct: 158 ERLILIN-PFNQTIILHGSYDSSQGQNNNHTPI----GSLGDYFIGPGLDLLLQHLAEND 212
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPAKKEA++ LPTV ++E
Sbjct: 213 PNRYGTPPAKKEAVEGLPTVTVKE 236
>ref|XP_004502170.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Cicer
arietinum] gi|502134582|ref|XP_004502171.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform X2 [Cicer
arietinum]
Length = 367
Score = 100 bits (249), Expect = 2e-19
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QGS D+ SLGDYF+GPGLD+LLQHLA+ND
Sbjct: 163 EHVILIN-PFNQTIIVQGSYDSNRDQSDIHSTI----GSLGDYFVGPGLDLLLQHLAEND 217
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA KEA++ALPTV+I E
Sbjct: 218 PNRYGTPPAPKEAVEALPTVKINE 241
>ref|XP_002285765.1| PREDICTED: uncharacterized protein LOC100250148 isoform 1 [Vitis
vinifera] gi|225435818|ref|XP_002285766.1| PREDICTED:
uncharacterized protein LOC100250148 isoform 2 [Vitis
vinifera]
Length = 368
Score = 99.8 bits (247), Expect = 3e-19
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E LI+IN PFNQ II+QGS D+ SLGDYFIGP LD+LLQHLA+ND
Sbjct: 158 ERLILIN-PFNQTIIVQGSFDSNQAQNQNQNTI----GSLGDYFIGPSLDLLLQHLAEND 212
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+K+AI+A+PTV+I+E
Sbjct: 213 PNRYGTPPAQKDAIEAMPTVKIKE 236
>gb|EMJ06582.1| hypothetical protein PRUPE_ppa007335mg [Prunus persica]
Length = 372
Score = 99.0 bits (245), Expect = 6e-19
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PF+Q II+QGS D+ SLGDYFIGPGLD+LLQHLA+ND
Sbjct: 159 ERVILIN-PFSQTIIVQGSYDSNQGQNNNHTPM----GSLGDYFIGPGLDLLLQHLAEND 213
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KEA++ALPTV I+E
Sbjct: 214 PNRYGTPPAQKEAVEALPTVTIKE 237
>ref|XP_002303979.2| zinc finger family protein [Populus trichocarpa]
gi|550343656|gb|EEE78958.2| zinc finger family protein
[Populus trichocarpa]
Length = 388
Score = 98.6 bits (244), Expect = 7e-19
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ+II+QGS D+ SLGDY IGPGLD+LLQHLA+ND
Sbjct: 169 ERVILIN-PFNQSIIVQGSYDSNNVQNQNQNAI----GSLGDYVIGPGLDLLLQHLAEND 223
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KEAI+ALPTV ++E
Sbjct: 224 PNRYGTPPAQKEAIEALPTVTVKE 247
>ref|XP_006829824.1| hypothetical protein AMTR_s00119p00089020 [Amborella trichopoda]
gi|548835405|gb|ERM97240.1| hypothetical protein
AMTR_s00119p00089020 [Amborella trichopoda]
Length = 337
Score = 98.6 bits (244), Expect = 7e-19
Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = -2
Query: 252 GLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXG--AASLGDYFIGPGLDILLQHLADN 79
G+I+IN P NQAIILQGS DA +SLGDY IGPGLD+LLQHLA+N
Sbjct: 131 GVILIN-PLNQAIILQGSFDANPIPNQNNDQTGSTNIGSSLGDYVIGPGLDLLLQHLAEN 189
Query: 78 DPNKYGTPPAKKEAIDALPTVRIEE 4
DPN+YGTPPA KEA++ALPTV+ E
Sbjct: 190 DPNRYGTPPATKEAVEALPTVKTGE 214
>emb|CBI16568.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 98.6 bits (244), Expect = 7e-19
Identities = 50/82 (60%), Positives = 62/82 (75%)
Frame = -2
Query: 249 LIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADNDPN 70
LI+IN PFNQ II+QGS D+ SLGDYFIGP LD+LLQHLA+NDPN
Sbjct: 114 LILIN-PFNQTIIVQGSFDSNQAQNQNQNTI----GSLGDYFIGPSLDLLLQHLAENDPN 168
Query: 69 KYGTPPAKKEAIDALPTVRIEE 4
+YGTPPA+K+AI+A+PTV+I+E
Sbjct: 169 RYGTPPAQKDAIEAMPTVKIKE 190
>ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449519040|ref|XP_004166543.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 362
Score = 98.2 bits (243), Expect = 1e-18
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ I++QG + SLGDYF+GPGLD+LLQH+A+ND
Sbjct: 161 ERVILIN-PFNQTIVVQGGENQNQNQNSI--------GSLGDYFVGPGLDLLLQHIAEND 211
Query: 75 PNKYGTPPAKKEAIDALPTVRIEEE 1
PN+YGTPPA+KEA+DALPTVR+E E
Sbjct: 212 PNRYGTPPAQKEAVDALPTVRVELE 236
>ref|XP_003601604.1| RING finger protein [Medicago truncatula]
gi|355490652|gb|AES71855.1| RING finger protein
[Medicago truncatula]
Length = 352
Score = 97.1 bits (240), Expect = 2e-18
Identities = 48/84 (57%), Positives = 62/84 (73%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QGS D+ +LGDYF+GPGLD+LLQHL++ND
Sbjct: 151 EHVILIN-PFNQTIIVQGSYDSNRDQSDNHNPI----GALGDYFVGPGLDLLLQHLSEND 205
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA KEA+++LPTV+I E
Sbjct: 206 PNRYGTPPAPKEAVESLPTVKINE 229
>ref|XP_006445556.1| hypothetical protein CICLE_v10015642mg [Citrus clementina]
gi|568871578|ref|XP_006488959.1| PREDICTED: E3
ubiquitin-protein ligase CIP8-like [Citrus sinensis]
gi|557548167|gb|ESR58796.1| hypothetical protein
CICLE_v10015642mg [Citrus clementina]
Length = 375
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QG SLGDYF+GPGLD+LLQHLA+ND
Sbjct: 162 ERVILIN-PFNQTIIVQGG----SYDGQHQNHNHTPIGSLGDYFVGPGLDLLLQHLAEND 216
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KEA++A+P+V+IEE
Sbjct: 217 PNRYGTPPAQKEAVEAMPSVKIEE 240
>ref|XP_002297615.2| hypothetical protein POPTR_0001s03880g [Populus trichocarpa]
gi|550346456|gb|EEE82420.2| hypothetical protein
POPTR_0001s03880g [Populus trichocarpa]
Length = 382
Score = 95.9 bits (237), Expect = 5e-18
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QGS D+ S GDYFIGPGLD+LLQHLADND
Sbjct: 161 ERVILIN-PFNQNIIVQGSYDSNNDENQNQNP----VGSFGDYFIGPGLDLLLQHLADND 215
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGT PA+KEA++ALPTV I+E
Sbjct: 216 PNRYGTLPAQKEAVEALPTVIIKE 239
>gb|EXC04259.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 381
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ +++QG + SLGDYFIGPGLD+LLQHLA+ND
Sbjct: 168 ERVILIN-PFNQTVLVQGQNE-----------NQNPIGSLGDYFIGPGLDMLLQHLAEND 215
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KEA++ALPTV I+E
Sbjct: 216 PNRYGTPPAQKEAVEALPTVAIKE 239
>ref|XP_006348226.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X3
[Solanum tuberosum] gi|565362992|ref|XP_006348227.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X4 [Solanum tuberosum]
gi|565362994|ref|XP_006348228.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X5 [Solanum
tuberosum]
Length = 360
Score = 94.7 bits (234), Expect = 1e-17
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QGS SLGDYFIGPGLD+LLQHLA+ND
Sbjct: 152 ERVILIN-PFNQTIIVQGS---------DNNSRNQPIGSLGDYFIGPGLDVLLQHLAEND 201
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KE ++ALP V I+E
Sbjct: 202 PNRYGTPPAQKEVVEALPVVTIDE 225
>ref|XP_006348225.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X2
[Solanum tuberosum]
Length = 378
Score = 94.7 bits (234), Expect = 1e-17
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QGS SLGDYFIGPGLD+LLQHLA+ND
Sbjct: 170 ERVILIN-PFNQTIIVQGS---------DNNSRNQPIGSLGDYFIGPGLDVLLQHLAEND 219
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KE ++ALP V I+E
Sbjct: 220 PNRYGTPPAQKEVVEALPVVTIDE 243
>ref|XP_006348224.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Solanum tuberosum]
Length = 395
Score = 94.7 bits (234), Expect = 1e-17
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = -2
Query: 255 EGLIVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADND 76
E +I+IN PFNQ II+QGS SLGDYFIGPGLD+LLQHLA+ND
Sbjct: 187 ERVILIN-PFNQTIIVQGS---------DNNSRNQPIGSLGDYFIGPGLDVLLQHLAEND 236
Query: 75 PNKYGTPPAKKEAIDALPTVRIEE 4
PN+YGTPPA+KE ++ALP V I+E
Sbjct: 237 PNRYGTPPAQKEVVEALPVVTIDE 260
>ref|XP_006279491.1| hypothetical protein CARUB_v10026533mg [Capsella rubella]
gi|482548195|gb|EOA12389.1| hypothetical protein
CARUB_v10026533mg [Capsella rubella]
Length = 399
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = -2
Query: 246 IVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADNDPNK 67
+++ +P+NQ++++QGS D SLGDYFIGPGLD+LLQHLA+NDPN+
Sbjct: 185 VIMINPYNQSVVVQGSSDRTQNHPSL--------TSLGDYFIGPGLDLLLQHLAENDPNR 236
Query: 66 YGTPPAKKEAIDALPTVRIEE 4
GTPPA+KEA++ALPTV+I E
Sbjct: 237 QGTPPARKEAVEALPTVKIME 257
>ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310286|gb|EFH40710.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 395
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/81 (54%), Positives = 60/81 (74%)
Frame = -2
Query: 246 IVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADNDPNK 67
+++ +P+NQ++++QGS D SLGDYFIGPGLD+LLQHLA+NDPN+
Sbjct: 181 VIMINPYNQSLVVQGSSDQNPNHPSL--------TSLGDYFIGPGLDLLLQHLAENDPNR 232
Query: 66 YGTPPAKKEAIDALPTVRIEE 4
GTPPA+KEA++ALPTV+I E
Sbjct: 233 QGTPPARKEAVEALPTVKIME 253
>ref|XP_002523395.1| zinc finger protein, putative [Ricinus communis]
gi|223537345|gb|EEF38974.1| zinc finger protein,
putative [Ricinus communis]
Length = 394
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/80 (57%), Positives = 58/80 (72%)
Frame = -2
Query: 246 IVINHPFNQAIILQGSLDAXXXXXXXXXXXXXGAASLGDYFIGPGLDILLQHLADNDPNK 67
+++ +P N+ II QGS D+ SLGDYFIGPGLD+LLQHLA+NDPN+
Sbjct: 161 VILINPSNRTIIFQGSYDSSNGQGQNNAPI----GSLGDYFIGPGLDLLLQHLAENDPNR 216
Query: 66 YGTPPAKKEAIDALPTVRIE 7
YGTPPA+KEAI+ALPTV I+
Sbjct: 217 YGTPPAQKEAIEALPTVTIK 236