BLASTX nr result

ID: Zingiber24_contig00046785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046785
         (412 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    95   8e-18
ref|XP_002535169.1| conserved hypothetical protein [Ricinus comm...    77   2e-12

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 52/87 (59%), Positives = 60/87 (68%), Gaps = 5/87 (5%)
 Frame = +1

Query: 97  RTCKQRMLMFLFV---FFLPSCFSISNQDKPGTTVRREKTRSHSDLDMWNRLAPYVLK*F 267
           R  K+   +FL +    F+PSC SI NQDKPGTTVRRE TRSHSDLDMWNRLAPYVLK F
Sbjct: 540 RVKKENSSIFLSLPVEHFVPSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVLKLF 599

Query: 268 GRHGQ--SPKKEVKKMICKIEFFISLR 342
           GRHG+   PK+E  +     E F  +R
Sbjct: 600 GRHGKISRPKEEGNEWDKTHEIFEHIR 626


>ref|XP_002535169.1| conserved hypothetical protein [Ricinus communis]
           gi|223523841|gb|EEF27214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 84

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/42 (88%), Positives = 38/42 (90%)
 Frame = -2

Query: 285 ALTMSPELFQYIWRKTIPHIEVGMGSGLFTSYRSARFVLIGD 160
           A TMSPE  QYIWRKTIPHIEVGMGSG+FTSYRSARFVLI D
Sbjct: 43  AWTMSPEQSQYIWRKTIPHIEVGMGSGVFTSYRSARFVLIPD 84


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