BLASTX nr result

ID: Zingiber24_contig00046746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046746
         (378 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006852320.1| hypothetical protein AMTR_s00049p00202480 [A...    55   7e-06
ref|XP_002312675.2| hypothetical protein POPTR_0008s19090g [Popu...    55   1e-05

>ref|XP_006852320.1| hypothetical protein AMTR_s00049p00202480 [Amborella trichopoda]
           gi|548855924|gb|ERN13787.1| hypothetical protein
           AMTR_s00049p00202480 [Amborella trichopoda]
          Length = 692

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1   NEVLSSDFRIVIDSSMVLSSIYPESF-GQLASNLTTIADNEEEINWRRRGNLQLSALYGS 177
           NE LSS+ R V D+S V+SS + E      +S L      + E NW   GN  LSA YGS
Sbjct: 234 NEALSSNLRFVFDASEVISSFFSEIIVHHHSSYLRNSEVMDREKNWEYEGNADLSASYGS 293

Query: 178 LSFPQTNLLNKPLKVVKCFSKY 243
             F   N   K +K+V+C  +Y
Sbjct: 294 FYFRPINFSKKLVKLVRCDGQY 315


>ref|XP_002312675.2| hypothetical protein POPTR_0008s19090g [Populus trichocarpa]
           gi|550333439|gb|EEE90042.2| hypothetical protein
           POPTR_0008s19090g [Populus trichocarpa]
          Length = 552

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
 Frame = +1

Query: 1   NEVLSSDFRIVIDSSMVLSSI---YPESFGQLASNLTTIADNEEEINWRRRGNLQLSALY 171
           NE +SS+ R+V D+S  +S +   YPE + +L+   +++ + E   +W   GN  L ALY
Sbjct: 125 NEAVSSELRLVFDASWTISCLSLNYPEHWSELSVRGSSVLEIENR-SWEEGGNSHLGALY 183

Query: 172 GSLSFPQTNLLNKPLKVVKCFSKYYLVDQLKGTIYFSQVSVG 297
           GS+ F + N  +  + ++ C  +Y   D+ + ++Y S    G
Sbjct: 184 GSMFFREIN-YSGLVNLLNCEGQYLFADRTEDSVYPSVCQTG 224


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