BLASTX nr result
ID: Zingiber24_contig00046714
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046714
(261 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea m... 99 5e-19
ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [S... 96 5e-18
gb|EMS68913.1| E3 ubiquitin-protein ligase SHPRH [Triticum urartu] 95 9e-18
ref|XP_006658968.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 93 4e-17
ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 92 9e-17
emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera] 92 9e-17
ref|XP_006575381.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 91 1e-16
ref|XP_006575379.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 91 1e-16
ref|XP_006842523.1| hypothetical protein AMTR_s00077p00115750 [A... 91 1e-16
ref|XP_004958703.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 91 2e-16
ref|XP_004308992.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 90 4e-16
ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis ... 89 5e-16
gb|ESW13318.1| hypothetical protein PHAVU_008G186300g [Phaseolus... 89 6e-16
gb|ESW13317.1| hypothetical protein PHAVU_008G186300g [Phaseolus... 89 6e-16
ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 d... 89 6e-16
gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japo... 89 6e-16
gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indi... 89 6e-16
ref|XP_006411344.1| hypothetical protein EUTSA_v10016132mg [Eutr... 89 8e-16
gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP bindin... 89 8e-16
gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP bindin... 89 8e-16
>tpg|DAA64140.1| TPA: hypothetical protein ZEAMMB73_955502 [Zea mays]
Length = 597
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/70 (70%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = +1
Query: 52 NKME-PKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKNCLTSH 228
NK E +IKRQK ERVECICGAASESS YTGLWVQCD CDAWQHA CVGY PK+N L +
Sbjct: 383 NKTEMDQIKRQKVERVECICGAASESSAYTGLWVQCDICDAWQHADCVGYSPKRNILFA- 441
Query: 229 ENDSKDGVVN 258
D+ + VV+
Sbjct: 442 --DTTEDVVS 449
>ref|XP_002463397.1| hypothetical protein SORBIDRAFT_02g043040 [Sorghum bicolor]
gi|241926774|gb|EER99918.1| hypothetical protein
SORBIDRAFT_02g043040 [Sorghum bicolor]
Length = 1475
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/57 (78%), Positives = 47/57 (82%), Gaps = 1/57 (1%)
Frame = +1
Query: 52 NKME-PKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKNCL 219
NK E +IKRQK ERVECICGAASESS Y GLWVQCD CDAWQHA CVGY PKK+ L
Sbjct: 384 NKTEMDQIKRQKVERVECICGAASESSAYMGLWVQCDICDAWQHADCVGYSPKKDIL 440
>gb|EMS68913.1| E3 ubiquitin-protein ligase SHPRH [Triticum urartu]
Length = 1499
Score = 95.1 bits (235), Expect = 9e-18
Identities = 44/68 (64%), Positives = 51/68 (75%)
Frame = +1
Query: 34 QNYSRSNKMEPKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKN 213
++ SR+ K I RQKR+RVECICGAASESS Y G+WVQCD CDAWQH CVGY PKK
Sbjct: 224 RSVSRTRKEIDLISRQKRDRVECICGAASESSAYKGIWVQCDICDAWQHGDCVGYSPKKG 283
Query: 214 CLTSHEND 237
LT ++D
Sbjct: 284 -LTFDDDD 290
>ref|XP_006658968.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Oryza
brachyantha]
Length = 1650
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/78 (58%), Positives = 54/78 (69%)
Frame = +1
Query: 1 RRPSMEAGYAYQNYSRSNKMEPKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQH 180
RRP AGY+ S + K +IKR KRERVECICGAAS +S Y G+W+QCD CDAWQH
Sbjct: 345 RRP-YSAGYSV---SSNIKGTYQIKRHKRERVECICGAASVTSAYQGIWIQCDICDAWQH 400
Query: 181 AKCVGYFPKKNCLTSHEN 234
A CVGY PK+ S +N
Sbjct: 401 ASCVGYSPKEEMHFSDDN 418
>ref|XP_003633446.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Vitis vinifera]
Length = 1704
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 RRPSMEAGYAYQNYSRSNKMEP-KIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQ 177
R+P+ E+G N ++ + + +KR KR+ VECICGA SES +Y GLWVQCD CDAWQ
Sbjct: 374 RKPASESGILLNNALQAAQGQKINLKRLKRDHVECICGAVSESPRYKGLWVQCDVCDAWQ 433
Query: 178 HAKCVGYFPKKNCLTSHENDS 240
HA CVGY P S EN +
Sbjct: 434 HADCVGYSPTAKTTKSKENSN 454
>emb|CAN69425.1| hypothetical protein VITISV_043713 [Vitis vinifera]
Length = 1111
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +1
Query: 1 RRPSMEAGYAYQNYSRSNKMEP-KIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQ 177
R+P+ E+G N ++ + + +KR KR+ VECICGA SES +Y GLWVQCD CDAWQ
Sbjct: 376 RKPASESGILLNNALQAAQGQKINLKRLKRDHVECICGAVSESPRYKGLWVQCDVCDAWQ 435
Query: 178 HAKCVGYFPKKNCLTSHENDS 240
HA CVGY P S EN +
Sbjct: 436 HADCVGYSPTAKTTKSKENSN 456
>ref|XP_006575381.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X3
[Glycine max]
Length = 1503
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +1
Query: 70 IKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKNCLTSHE 231
+KR KRERVECICGA SES KY GLWVQCD CDAWQHA CVGY PK L S +
Sbjct: 408 LKRLKRERVECICGAVSESLKYEGLWVQCDICDAWQHADCVGYSPKGKSLKSKQ 461
>ref|XP_006575379.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like isoform X1
[Glycine max] gi|571441227|ref|XP_006575380.1|
PREDICTED: E3 ubiquitin-protein ligase SHPRH-like
isoform X2 [Glycine max]
Length = 1671
Score = 91.3 bits (225), Expect = 1e-16
Identities = 40/54 (74%), Positives = 42/54 (77%)
Frame = +1
Query: 70 IKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKNCLTSHE 231
+KR KRERVECICGA SES KY GLWVQCD CDAWQHA CVGY PK L S +
Sbjct: 408 LKRLKRERVECICGAVSESLKYEGLWVQCDICDAWQHADCVGYSPKGKSLKSKQ 461
>ref|XP_006842523.1| hypothetical protein AMTR_s00077p00115750 [Amborella trichopoda]
gi|548844609|gb|ERN04198.1| hypothetical protein
AMTR_s00077p00115750 [Amborella trichopoda]
Length = 1697
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/75 (57%), Positives = 50/75 (66%)
Frame = +1
Query: 1 RRPSMEAGYAYQNYSRSNKMEPKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQH 180
RR ME N+ + + IKR KRERVECICGA +ES KY GLW+QCD CDAWQH
Sbjct: 389 RRELMELD-TLTNHEVDDCSQRNIKRLKRERVECICGAVNESPKYEGLWIQCDICDAWQH 447
Query: 181 AKCVGYFPKKNCLTS 225
A CVGY P K+ T+
Sbjct: 448 ANCVGYKPGKSLATN 462
>ref|XP_004958703.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Setaria italica]
Length = 1681
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Frame = +1
Query: 52 NKME-PKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKN 213
NK E +IKRQK ERVECICGAASES Y GLWVQCD CDAWQHA CVGY PK++
Sbjct: 381 NKTEMSQIKRQKVERVECICGAASESFAYKGLWVQCDICDAWQHADCVGYTPKED 435
>ref|XP_004308992.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Fragaria vesca
subsp. vesca]
Length = 1662
Score = 89.7 bits (221), Expect = 4e-16
Identities = 37/55 (67%), Positives = 43/55 (78%)
Frame = +1
Query: 67 KIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKNCLTSHE 231
K+KR KRERVECICGA S++ +Y GLWVQCD CDAWQHA CVGY P + S+E
Sbjct: 405 KLKRLKRERVECICGAVSDNGRYRGLWVQCDICDAWQHADCVGYSPSGKTIKSNE 459
>ref|XP_002881739.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297327578|gb|EFH57998.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 1635
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = +1
Query: 1 RRPSMEAGYAYQNYSRSNKMEPKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQH 180
R+P+ + S ++ + ++R KRERVECICGA SES KY G+WVQCD CDAWQH
Sbjct: 364 RKPAEDEISVSNGSSFTDDLNAGLRRLKRERVECICGAVSESRKYKGVWVQCDLCDAWQH 423
Query: 181 AKCVGYFPK 207
A CVGY PK
Sbjct: 424 ADCVGYSPK 432
>gb|ESW13318.1| hypothetical protein PHAVU_008G186300g [Phaseolus vulgaris]
Length = 1669
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = +1
Query: 70 IKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKNCLTSHE 231
+KR KR+RVEC+CGA SES KY GLWVQCD CDAWQHA CVGY PK L S +
Sbjct: 405 LKRVKRDRVECMCGAVSESLKYEGLWVQCDICDAWQHADCVGYSPKGKSLKSKQ 458
>gb|ESW13317.1| hypothetical protein PHAVU_008G186300g [Phaseolus vulgaris]
Length = 1629
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = +1
Query: 70 IKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKKNCLTSHE 231
+KR KR+RVEC+CGA SES KY GLWVQCD CDAWQHA CVGY PK L S +
Sbjct: 365 LKRVKRDRVECMCGAVSESLKYEGLWVQCDICDAWQHADCVGYSPKGKSLKSKQ 418
>ref|NP_181609.4| RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing
protein [Arabidopsis thaliana]
gi|330254782|gb|AEC09876.1| RING-finger, DEAD-like
helicase, PHD and SNF2 domain-containing protein
[Arabidopsis thaliana]
Length = 1664
Score = 89.0 bits (219), Expect = 6e-16
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = +1
Query: 1 RRPSMEAGYAYQNYSRSNKMEPKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQH 180
R+P+ + S ++ + ++R KRERVECICGA SES KY G+WVQCD CDAWQH
Sbjct: 380 RKPAEDEISVSNGSSVTDVLNAGLRRLKRERVECICGAVSESHKYKGVWVQCDLCDAWQH 439
Query: 181 AKCVGYFPK 207
A CVGY PK
Sbjct: 440 ADCVGYSPK 448
>gb|EEE67827.1| hypothetical protein OsJ_25598 [Oryza sativa Japonica Group]
Length = 1663
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 43 SRSNKMEPKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKK 210
S + K +IKR KRERVECICGAAS +S Y G+W+QCD CDAWQHA CVGY PK+
Sbjct: 388 SSNIKGADQIKRHKRERVECICGAASVTSAYQGIWIQCDICDAWQHASCVGYSPKE 443
>gb|EEC82693.1| hypothetical protein OsI_27351 [Oryza sativa Indica Group]
Length = 1547
Score = 89.0 bits (219), Expect = 6e-16
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +1
Query: 43 SRSNKMEPKIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPKK 210
S + K +IKR KRERVECICGAAS +S Y G+W+QCD CDAWQHA CVGY PK+
Sbjct: 388 SSNIKGADQIKRHKRERVECICGAASVTSAYQGIWIQCDICDAWQHASCVGYSPKE 443
>ref|XP_006411344.1| hypothetical protein EUTSA_v10016132mg [Eutrema salsugineum]
gi|557112513|gb|ESQ52797.1| hypothetical protein
EUTSA_v10016132mg [Eutrema salsugineum]
Length = 1660
Score = 88.6 bits (218), Expect = 8e-16
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +1
Query: 70 IKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQHAKCVGYFPK 207
+KR KRERVECICGA SES KY G+WVQCD CDAWQHA CVGY PK
Sbjct: 402 LKRLKRERVECICGAVSESRKYKGVWVQCDMCDAWQHADCVGYSPK 447
>gb|EOY20188.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 2 [Theobroma cacao]
Length = 1666
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 RRPSMEAGYAYQNYSRSNKMEP-KIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQ 177
++PS E G + E ++R KRERVECICGA SE+ KY GLWVQCD CDAWQ
Sbjct: 382 QKPSSEGGVCKDTEAEVTMDEKISLRRLKRERVECICGAVSENRKYKGLWVQCDICDAWQ 441
Query: 178 HAKCVGYFPKKNCLTSHENDSKDGV 252
H++CVGY P+ + + + G+
Sbjct: 442 HSECVGYSPRGKARKASASADEQGL 466
>gb|EOY20187.1| Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid
binding isoform 1 [Theobroma cacao]
Length = 1682
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 RRPSMEAGYAYQNYSRSNKMEP-KIKRQKRERVECICGAASESSKYTGLWVQCDFCDAWQ 177
++PS E G + E ++R KRERVECICGA SE+ KY GLWVQCD CDAWQ
Sbjct: 382 QKPSSEGGVCKDTEAEVTMDEKISLRRLKRERVECICGAVSENRKYKGLWVQCDICDAWQ 441
Query: 178 HAKCVGYFPKKNCLTSHENDSKDGV 252
H++CVGY P+ + + + G+
Sbjct: 442 HSECVGYSPRGKARKASASADEQGL 466