BLASTX nr result
ID: Zingiber24_contig00046644
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046644
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004954725.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containi... 79 8e-13
ref|XP_006653413.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
ref|XP_004229583.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
emb|CBI39640.3| unnamed protein product [Vitis vinifera] 68 1e-09
gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indi... 67 2e-09
emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group] gi|222628... 67 2e-09
emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group] 67 2e-09
gb|ESW12037.1| hypothetical protein PHAVU_008G079600g [Phaseolus... 67 2e-09
ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containi... 66 5e-09
emb|CBI33142.3| unnamed protein product [Vitis vinifera] 66 5e-09
emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera] 66 5e-09
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi... 65 9e-09
ref|XP_002974279.1| hypothetical protein SELMODRAFT_101336 [Sela... 65 9e-09
ref|XP_006356525.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_006385606.1| pentatricopeptide repeat-containing family p... 65 1e-08
gb|EPS69104.1| hypothetical protein M569_05662, partial [Genlise... 65 1e-08
ref|XP_002329533.1| predicted protein [Populus trichocarpa] 65 1e-08
ref|XP_006828004.1| hypothetical protein AMTR_s00008p00241920 [A... 64 3e-08
>ref|XP_004954725.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Setaria italica]
Length = 656
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/82 (54%), Positives = 58/82 (70%)
Frame = +3
Query: 3 RPLSAAPNPPSRGDGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLV 182
R ++AP PP R +G I WNSAITA L G V A +F++MP R N TWNCM+SGLV
Sbjct: 20 RVYTSAP-PPPRHEGDIVRWNSAITAHLRAGRVGAARRVFDEMPDR-NVFTWNCMISGLV 77
Query: 183 KNRRIADAQRVFDSMPRKNVVA 248
+NR +ADA+ VFD+MP +N V+
Sbjct: 78 RNRMLADARGVFDAMPFRNSVS 99
Score = 55.5 bits (132), Expect = 7e-06
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
W + + L NG+V AW LF+ MP R + + WN M+ G V + R+ DA R+F MP ++
Sbjct: 255 WTAIVRGYLKNGDVDAAWKLFQDMPDR-DILAWNTMIGGFVMSERLDDALRLFADMPDRD 313
Query: 240 VVA 248
+V+
Sbjct: 314 LVS 316
>ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 78.6 bits (192), Expect = 8e-13
Identities = 42/74 (56%), Positives = 52/74 (70%)
Frame = +3
Query: 27 PPSRGDGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADA 206
PP D IF WN+ ITA L G VA A +F++MP R N TWNCM+SGLV NR +ADA
Sbjct: 37 PPYAVD--IFQWNAVITAHLRAGRVAAARRVFDEMPER-NVFTWNCMISGLVGNRMLADA 93
Query: 207 QRVFDSMPRKNVVA 248
+RVFD+MP +N V+
Sbjct: 94 RRVFDAMPVRNPVS 107
>ref|XP_006653413.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Oryza brachyantha]
Length = 664
Score = 75.1 bits (183), Expect = 9e-12
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +3
Query: 9 LSAAPNPPSRGDGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKN 188
L P PP R G IF NS I A L G V A +F++M R N TWNCM+SGLV+N
Sbjct: 29 LGPLPPPPHRQAGYIFQLNSIINAHLRAGRVTAARRVFDEMSER-NVFTWNCMISGLVRN 87
Query: 189 RRIADAQRVFDSMPRKNVVA 248
R +A+A+++FD+MP +N V+
Sbjct: 88 RMLAEARKMFDAMPMRNSVS 107
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 42 DGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFD 221
D + WN+ I+ + NG V A LF+ MP R N V+W M+SG +K + + +A+ +FD
Sbjct: 133 DRNVVSWNAMISGYVHNGMVKRARELFDMMPSR-NDVSWLTMISGYIKRKHVHEARELFD 191
Query: 222 SMP 230
SMP
Sbjct: 192 SMP 194
>ref|XP_004229583.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum lycopersicum]
Length = 599
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +3
Query: 51 IFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMP 230
++ WNS IT + G+V A LF++MP R N VTWNCM+SG V N + DAQ+VFD+MP
Sbjct: 32 LYNWNSKITNSFKKGDVEGARKLFDEMPQR-NVVTWNCMISGYVTNGMMCDAQQVFDTMP 90
Query: 231 RKNVVA 248
+NVV+
Sbjct: 91 SRNVVS 96
Score = 55.1 bits (131), Expect = 1e-05
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WNS ++ L +G + +A HLF MP R N V+WN +L G ++ I A+ +F+ MPRK+
Sbjct: 283 WNSMLSGYLQHGRLKDALHLFHTMPWR-NTVSWNSILCGFIQQGDITSARELFEQMPRKD 341
>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 42 DGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFD 221
D GI WNS + N A +LF++MP R N V+WN ++SG VKNR +++A++ FD
Sbjct: 44 DKGIVSWNSMVAGYFQNNRPREARYLFDKMPER-NTVSWNGLISGYVKNRMVSEARKAFD 102
Query: 222 SMPRKNVVA 248
+MP +NVV+
Sbjct: 103 TMPERNVVS 111
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
W + I+ + NG+V A LFE MP KN V+W ML G + RI +A +FD+MP K
Sbjct: 205 WTTMISGYVQNGQVDVARKLFEVMPE-KNEVSWTAMLMGYTQGGRIEEASELFDAMPVKA 263
Query: 240 VVA 248
VVA
Sbjct: 264 VVA 266
>emb|CBI39640.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +3
Query: 42 DGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFD 221
D GI WNS + N A +LF++MP R N V+WN ++SG VKNR +++A++ FD
Sbjct: 44 DKGIVSWNSMVAGYFQNNRPREARYLFDKMPER-NTVSWNGLISGYVKNRMVSEARKAFD 102
Query: 222 SMPRKNVVA 248
+MP +NVV+
Sbjct: 103 TMPERNVVS 111
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
W + I+ + NG+V A LFE MP KN V+W ML G + RI +A +FD+MP K
Sbjct: 205 WTTMISGYVQNGQVDVARKLFEVMPE-KNEVSWTAMLMGYTQGGRIEEASELFDAMPVKA 263
Query: 240 VVA 248
VVA
Sbjct: 264 VVA 266
>gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +3
Query: 27 PPSR-GDGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIAD 203
PP R G +F N+AI G VA A +F++M R N TWNCM+SGL++NR +A+
Sbjct: 25 PPQRHAAGDVFQSNTAINEHFRAGRVAAARRVFDEMSER-NVFTWNCMVSGLIRNRMLAE 83
Query: 204 AQRVFDSMPRKNVVA 248
A++VFD+MP +N V+
Sbjct: 84 ARKVFDAMPVRNSVS 98
>emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group] gi|222628896|gb|EEE61028.1|
hypothetical protein OsJ_14863 [Oryza sativa Japonica
Group]
Length = 655
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +3
Query: 27 PPSR-GDGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIAD 203
PP R G +F N+AI G VA A +F++M R N TWNCM+SGL++NR +A+
Sbjct: 25 PPQRHAAGDVFQSNTAINEHFRAGRVAAARRVFDEMSER-NVFTWNCMVSGLIRNRMLAE 83
Query: 204 AQRVFDSMPRKNVVA 248
A++VFD+MP +N V+
Sbjct: 84 ARKVFDAMPVRNSVS 98
>emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +3
Query: 27 PPSR-GDGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIAD 203
PP R G +F N+AI G VA A +F++M R N TWNCM+SGL++NR +A+
Sbjct: 25 PPQRHAAGDVFQSNTAINEHFRAGRVAAARRVFDEMSER-NVFTWNCMVSGLIRNRMLAE 83
Query: 204 AQRVFDSMPRKNVVA 248
A++VFD+MP +N V+
Sbjct: 84 ARKVFDAMPVRNSVS 98
>gb|ESW12037.1| hypothetical protein PHAVU_008G079600g [Phaseolus vulgaris]
Length = 709
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +3
Query: 42 DGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFD 221
D + W + + + NG+VA A LF QMPH KN V+W ML GL++ RI DA+++FD
Sbjct: 112 DRNVVSWTTMVRGYVRNGDVAEAERLFWQMPH-KNVVSWTVMLGGLLQEARIEDARKLFD 170
Query: 222 SMPRKNVVA 248
MP K+VVA
Sbjct: 171 MMPEKDVVA 179
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WN+ + A + + A LFE+MPHR N V+WN ++SG +KN + +A+RVFD M +N
Sbjct: 56 WNAMVAAYFEARQPREALCLFERMPHR-NTVSWNGLISGHIKNGMLLEARRVFDVMSDRN 114
Query: 240 VVA 248
VV+
Sbjct: 115 VVS 117
>ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 65.9 bits (159), Expect = 5e-09
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WNS I +++ + AW F+ MP R N +WN M+SGLV+ R+ +A R+F+ MPR+N
Sbjct: 112 WNSMIAGCIEDERIDEAWQYFQAMPQR-NTASWNAMISGLVRYDRVEEASRLFEEMPRRN 170
Query: 240 VVA 248
V++
Sbjct: 171 VIS 173
>emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 65.9 bits (159), Expect = 5e-09
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WNS I +++ + AW F+ MP R N +WN M+SGLV+ R+ +A R+F+ MPR+N
Sbjct: 40 WNSMIAGCIEDERIDEAWQYFQAMPQR-NTASWNAMISGLVRYDRVEEASRLFEEMPRRN 98
Query: 240 VVA 248
V++
Sbjct: 99 VIS 101
>emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 65.9 bits (159), Expect = 5e-09
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WNS I +++ + AW F+ MP R N +WN M+SGLV+ R+ +A R+F+ MPR+N
Sbjct: 112 WNSMIAGCIEDERIDEAWQYFQAMPQR-NTASWNAMISGLVRYDRVEEASRLFEEMPRRN 170
Query: 240 VVA 248
V++
Sbjct: 171 VIS 173
>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +3
Query: 42 DGGIFWWNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFD 221
D + W S + + NG+VA A LF MPH KN V+W ML GL++ R+ DA+++FD
Sbjct: 114 DRNVVSWTSMVRGYVRNGDVAEAERLFWHMPH-KNVVSWTVMLGGLLQEGRVDDARKLFD 172
Query: 222 SMPRKNVVA 248
MP K+VVA
Sbjct: 173 MMPEKDVVA 181
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/63 (44%), Positives = 44/63 (69%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WN+ + A + + A LFE+MP R N V+WN ++SG +KN +++A+RVFD+MP +N
Sbjct: 58 WNAMVAAYFEARQPREALLLFEKMPQR-NTVSWNGLISGHIKNGMLSEARRVFDTMPDRN 116
Query: 240 VVA 248
VV+
Sbjct: 117 VVS 119
>ref|XP_002974279.1| hypothetical protein SELMODRAFT_101336 [Selaginella moellendorffii]
gi|300157877|gb|EFJ24501.1| hypothetical protein
SELMODRAFT_101336 [Selaginella moellendorffii]
Length = 330
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WN+ ITA+ +G V A LF++MP R + VTWN MLS NR + +A+R F+ MP KN
Sbjct: 9 WNTLITASAYSGNVEYAEELFQRMPER-DEVTWNAMLSAYAHNRHLEEAKRFFEEMPSKN 67
Query: 240 VVA 248
VVA
Sbjct: 68 VVA 70
>ref|XP_006356525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Solanum tuberosum]
Length = 704
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WNS IT N + LF+QMP R N V+WN ++SG VKNR + +A++VFD MP++N
Sbjct: 51 WNSIITGYFQNHQPNEGQCLFDQMPER-NIVSWNGLISGYVKNRMVKEARKVFDKMPQRN 109
Query: 240 VVA 248
V++
Sbjct: 110 VIS 112
>ref|XP_006385606.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550342735|gb|ERP63403.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 744
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
W S + D G + A LF++MP R N V+WN M++GL+KN + +A+RVFD +P KN
Sbjct: 144 WTSMLCGLADAGRICEARELFKEMPER-NVVSWNAMVAGLIKNEDLEEARRVFDEIPEKN 202
Query: 240 VVA 248
VV+
Sbjct: 203 VVS 205
>gb|EPS69104.1| hypothetical protein M569_05662, partial [Genlisea aurea]
Length = 775
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WNS ++ NG A +LF++MP R V+WN ++SG VKN IA+A++ FD MP +N
Sbjct: 41 WNSLVSCYFANGRPTEARNLFDEMPERST-VSWNALISGYVKNGMIAEARKAFDEMPHRN 99
Query: 240 VVA 248
VV+
Sbjct: 100 VVS 102
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WN+ I+ + NG +A A F++MPHR N V+W ML G V+ +++AQ +F MP KN
Sbjct: 72 WNALISGYVKNGMIAEARKAFDEMPHR-NVVSWTSMLRGHVEGGSLSEAQALFRRMPHKN 130
Query: 240 VVA 248
VV+
Sbjct: 131 VVS 133
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
W S + ++ G ++ A LF +MPH KN V+W ML GL+ + RI DA+ ++ MP K+
Sbjct: 103 WTSMLRGHVEGGSLSEAQALFRRMPH-KNVVSWTVMLGGLIDHGRIRDAENLYRQMPAKD 161
Query: 240 VVA 248
VA
Sbjct: 162 AVA 164
>ref|XP_002329533.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
W S + D G + A LF++MP R N V+WN M++GL+KN + +A+RVFD +P KN
Sbjct: 98 WTSMLCGLADAGRICEARELFKEMPER-NVVSWNAMVAGLIKNEDLEEARRVFDEIPEKN 156
Query: 240 VVA 248
VV+
Sbjct: 157 VVS 159
>ref|XP_006828004.1| hypothetical protein AMTR_s00008p00241920 [Amborella trichopoda]
gi|548832639|gb|ERM95420.1| hypothetical protein
AMTR_s00008p00241920 [Amborella trichopoda]
Length = 620
Score = 63.5 bits (153), Expect = 3e-08
Identities = 24/63 (38%), Positives = 41/63 (65%)
Frame = +3
Query: 60 WNSAITAALDNGEVANAWHLFEQMPHRKNHVTWNCMLSGLVKNRRIADAQRVFDSMPRKN 239
WN+ I DNG++ A F +MP +K+ +WN M+SG +++ I A+ +FD MP++N
Sbjct: 134 WNAMIAGFADNGQIEEALKYFNEMPEKKSIASWNAMISGFLRHDMIGQARELFDEMPKRN 193
Query: 240 VVA 248
V++
Sbjct: 194 VIS 196