BLASTX nr result
ID: Zingiber24_contig00046633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046633
(260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006489856.1| PREDICTED: small subunit processome componen... 79 5e-13
ref|XP_006489855.1| PREDICTED: small subunit processome componen... 79 5e-13
ref|XP_006489854.1| PREDICTED: small subunit processome componen... 79 5e-13
ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citr... 79 5e-13
ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Popu... 76 4e-12
gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis] 75 1e-11
ref|XP_003601650.1| Small subunit processome component-like prot... 75 1e-11
ref|XP_004492742.1| PREDICTED: small subunit processome componen... 73 5e-11
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255... 73 5e-11
emb|CBI17281.3| unnamed protein product [Vitis vinifera] 73 5e-11
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera] 73 5e-11
ref|XP_004247966.1| PREDICTED: small subunit processome componen... 72 8e-11
ref|XP_006601933.1| PREDICTED: small subunit processome componen... 72 1e-10
ref|XP_006360968.1| PREDICTED: small subunit processome componen... 71 1e-10
ref|XP_002518041.1| conserved hypothetical protein [Ricinus comm... 71 1e-10
gb|EMJ16091.1| hypothetical protein PRUPE_ppa000015mg [Prunus pe... 69 9e-10
ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subuni... 68 1e-09
ref|XP_004139015.1| PREDICTED: small subunit processome componen... 68 1e-09
gb|EMJ17348.1| hypothetical protein PRUPE_ppa015122mg [Prunus pe... 67 2e-09
gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [... 67 2e-09
>ref|XP_006489856.1| PREDICTED: small subunit processome component 20 homolog isoform X3
[Citrus sinensis]
Length = 2306
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D+FK EGSS E+ + L SCF+ LERE NL+P IFS L++ TAS+AI+ V
Sbjct: 824 DAFKQEGSSSEKPSSLFSCFLAMSRSHRLVSLLEREENLIPDIFSILTVMTASEAIVSSV 883
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNLDN D E ++K +L
Sbjct: 884 LKFIENLLNLDNEVDG-EYSAIKKVL 908
>ref|XP_006489855.1| PREDICTED: small subunit processome component 20 homolog isoform X2
[Citrus sinensis]
Length = 2702
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D+FK EGSS E+ + L SCF+ LERE NL+P IFS L++ TAS+AI+ V
Sbjct: 1220 DAFKQEGSSSEKPSSLFSCFLAMSRSHRLVSLLEREENLIPDIFSILTVMTASEAIVSSV 1279
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNLDN D E ++K +L
Sbjct: 1280 LKFIENLLNLDNEVDG-EYSAIKKVL 1304
>ref|XP_006489854.1| PREDICTED: small subunit processome component 20 homolog isoform X1
[Citrus sinensis]
Length = 2703
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D+FK EGSS E+ + L SCF+ LERE NL+P IFS L++ TAS+AI+ V
Sbjct: 1221 DAFKQEGSSSEKPSSLFSCFLAMSRSHRLVSLLEREENLIPDIFSILTVMTASEAIVSSV 1280
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNLDN D E ++K +L
Sbjct: 1281 LKFIENLLNLDNEVDG-EYSAIKKVL 1305
>ref|XP_006421008.1| hypothetical protein CICLE_v10004117mg [Citrus clementina]
gi|557522881|gb|ESR34248.1| hypothetical protein
CICLE_v10004117mg [Citrus clementina]
Length = 2651
Score = 79.3 bits (194), Expect = 5e-13
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D+FK EGSS E+ + L SCF+ LERE NL+P IFS L++ TAS+AI+ V
Sbjct: 1193 DAFKQEGSSSEKPSSLFSCFLAMSRSHRLISLLEREENLIPDIFSILTVMTASEAIVSSV 1252
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNLDN D E ++K +L
Sbjct: 1253 LKFIENLLNLDNEVDG-EYSAIKKVL 1277
>ref|XP_006369815.1| hypothetical protein POPTR_0001s32620g [Populus trichocarpa]
gi|550348719|gb|ERP66384.1| hypothetical protein
POPTR_0001s32620g [Populus trichocarpa]
Length = 2597
Score = 76.3 bits (186), Expect = 4e-12
Identities = 44/86 (51%), Positives = 55/86 (63%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
DSFK EGSS E+ + L SCF+ L RE NL P IFS L++ TAS+AII V
Sbjct: 1079 DSFKQEGSSSEKPSSLFSCFLAMSRSSHLVPLLFREKNLAPNIFSILTIPTASEAIISCV 1138
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNL++ D +N + K LL
Sbjct: 1139 LKFIENLLNLEDDLDDEDNAAQKLLL 1164
>gb|EXC21920.1| hypothetical protein L484_011085 [Morus notabilis]
Length = 2341
Score = 74.7 bits (182), Expect = 1e-11
Identities = 43/86 (50%), Positives = 57/86 (66%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
DSFK EGSS E+ + L SCF+ L RE NLVP IFS L++++AS++I+ V
Sbjct: 848 DSFKQEGSSSEKPSSLFSCFVAMTRSWKLVPLLYREKNLVPDIFSILTVTSASESILRCV 907
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNLD+ D E+ VK +L
Sbjct: 908 LKFIENLLNLDSELDD-EDNDVKRVL 932
>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
gi|355490698|gb|AES71901.1| Small subunit processome
component-like protein [Medicago truncatula]
Length = 2733
Score = 74.7 bits (182), Expect = 1e-11
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
+ FKHE +S E+ + LLSCF+ L RE +L+P IFS +S+++AS+AI+Y V
Sbjct: 1225 NKFKHEAASSEKPSSLLSCFLAMSANHKLVALLCREESLIPDIFSIVSVNSASEAIVYCV 1284
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+F+ENLL+LDN D+ ++ + K LL
Sbjct: 1285 LKFVENLLSLDNQLDYEDSSAHKVLL 1310
>ref|XP_004492742.1| PREDICTED: small subunit processome component 20 homolog [Cicer
arietinum]
Length = 2700
Score = 72.8 bits (177), Expect = 5e-11
Identities = 40/86 (46%), Positives = 58/86 (67%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D FK E +S E+ + LLSCF+ L RE +L+P IFS +S+++AS+AI+Y V
Sbjct: 1213 DKFKQEAASSEKPSSLLSCFLAMSANHKLVALLCREESLIPDIFSIVSVNSASEAIVYCV 1272
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+F+ENLL+LDN D+ E+ SV +L
Sbjct: 1273 LKFVENLLSLDNQLDY-EDSSVHRVL 1297
>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
Length = 3196
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D FK EGSS E+ + L SCF+ L RE NLV IFS L+++TAS+AII V
Sbjct: 806 DGFKQEGSSSEKPSSLFSCFVAMSRSHNLVSLLYREKNLVADIFSILTVTTASEAIISCV 865
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNLD+ D E+ ++K +L
Sbjct: 866 LKFIENLLNLDSELDD-EDVTIKKVL 890
>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
Length = 2629
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D FK EGSS E+ + L SCF+ L RE NLV IFS L+++TAS+AII V
Sbjct: 1189 DGFKQEGSSSEKPSSLFSCFVAMSRSHNLVSLLYREKNLVADIFSILTVTTASEAIISCV 1248
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNLD+ D E+ ++K +L
Sbjct: 1249 LKFIENLLNLDSELDD-EDVTIKKVL 1273
>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
Length = 2461
Score = 72.8 bits (177), Expect = 5e-11
Identities = 43/86 (50%), Positives = 56/86 (65%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D FK EGSS E+ + L SCF+ L RE NLV IFS L+++TAS+AII V
Sbjct: 913 DGFKQEGSSSEKPSSLFSCFVAMSRSHNLVSLLYREKNLVADIFSILTVTTASEAIISCV 972
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLLNLD+ D E+ ++K +L
Sbjct: 973 LKFIENLLNLDSELDD-EDVTIKKVL 997
>ref|XP_004247966.1| PREDICTED: small subunit processome component 20 homolog [Solanum
lycopersicum]
Length = 2660
Score = 72.0 bits (175), Expect = 8e-11
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Frame = -2
Query: 256 SFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPVL 77
SFK EG+S E+ + L SCF+ L RE NLVP +FS L++STASDAI+ VL
Sbjct: 1225 SFKQEGASSEKASSLFSCFLAMSRSSKLVPLLSREKNLVPDVFSMLAVSTASDAIVSSVL 1284
Query: 76 EFIENLLNLD---NSEDHL 29
+F+ENLL LD +ED+L
Sbjct: 1285 KFVENLLYLDIELGNEDNL 1303
>ref|XP_006601933.1| PREDICTED: small subunit processome component 20 homolog [Glycine
max]
Length = 2696
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/86 (44%), Positives = 57/86 (66%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D FK E +S E+ + LLSCF+ L R+ +LVP IFS +S+++AS+A+IY V
Sbjct: 1218 DKFKQEAASSEKPSSLLSCFLAMSANNKLVALLYRKESLVPDIFSIISVNSASEAVIYCV 1277
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+F+ENLL+LDN + +N + + LL
Sbjct: 1278 LKFVENLLSLDNEFNDEDNSAQRVLL 1303
>ref|XP_006360968.1| PREDICTED: small subunit processome component 20 homolog [Solanum
tuberosum]
Length = 1461
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/85 (49%), Positives = 54/85 (63%)
Frame = -2
Query: 256 SFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPVL 77
SFK EG+S E+ + L SCF+ L RE NLVP +FS L++STASDAI+ VL
Sbjct: 1204 SFKQEGASSEKASSLFSCFLAMSRSSKLVPLLSREKNLVPDVFSMLAVSTASDAIVSSVL 1263
Query: 76 EFIENLLNLDNSEDHLENKSVKNLL 2
+F+ENLL LD E E+ +K LL
Sbjct: 1264 KFVENLLYLD-IELGNEDNPLKRLL 1287
>ref|XP_002518041.1| conserved hypothetical protein [Ricinus communis]
gi|223542637|gb|EEF44174.1| conserved hypothetical
protein [Ricinus communis]
Length = 2535
Score = 71.2 bits (173), Expect = 1e-10
Identities = 42/86 (48%), Positives = 54/86 (62%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D FK EG S E+ + L SCF+ L RE NLVP IFS L+++TAS+AI V
Sbjct: 1180 DGFKQEGCSSEKPSSLFSCFLAMSSSHHLVPLLSREMNLVPDIFSILTVTTASEAIRSCV 1239
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FI+NLLNLD D E+ VK++L
Sbjct: 1240 LKFIDNLLNLDEELD--EDNKVKDVL 1263
>gb|EMJ16091.1| hypothetical protein PRUPE_ppa000015mg [Prunus persica]
Length = 2663
Score = 68.6 bits (166), Expect = 9e-10
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D FK EG SG++ + L SCF+ L RE LVP I S L++++AS+AII V
Sbjct: 1180 DGFKQEGPSGQKPSSLFSCFLALSRSQKLVPLLYREQKLVPDILSILTVTSASEAIISCV 1239
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+F+ENLLNLD+ D E+ +VK ++
Sbjct: 1240 LKFVENLLNLDHELDD-EDSAVKRVI 1264
>ref|XP_004167386.1| PREDICTED: LOW QUALITY PROTEIN: small subunit processome component 20
homolog, partial [Cucumis sativus]
Length = 2538
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
+SFKHEGSS E+ + L SCF+ L RE NLVP IF L++S AS II V
Sbjct: 1092 ESFKHEGSSSEKPSSLCSCFLAMSRSHKLVPLLARERNLVPDIFFILTISAASQPIILFV 1151
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLL+ D D + +V+++L
Sbjct: 1152 LQFIENLLSFDGELDG-NDSAVRSIL 1176
>ref|XP_004139015.1| PREDICTED: small subunit processome component 20 homolog [Cucumis
sativus]
Length = 2696
Score = 68.2 bits (165), Expect = 1e-09
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
+SFKHEGSS E+ + L SCF+ L RE NLVP IF L++S AS II V
Sbjct: 1250 ESFKHEGSSSEKPSSLCSCFLAMSRSHKLVPLLARERNLVPDIFFILTISAASQPIILFV 1309
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+FIENLL+ D D + +V+++L
Sbjct: 1310 LQFIENLLSFDGELDG-NDSAVRSIL 1334
>gb|EMJ17348.1| hypothetical protein PRUPE_ppa015122mg [Prunus persica]
Length = 2641
Score = 67.4 bits (163), Expect = 2e-09
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
D FK EG SG++ + L SCF+ L RE LVP I S L++ +AS+AI+ V
Sbjct: 1172 DGFKQEGPSGQKPSSLFSCFLALSRSQKLVPLLYREQKLVPDILSILTVMSASEAIVSCV 1231
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+F+ENLLNLD+ D E+ +VK ++
Sbjct: 1232 LKFVENLLNLDHELDD-EDSAVKRVI 1256
>gb|ESW35654.1| hypothetical protein PHAVU_001G253000g, partial [Phaseolus vulgaris]
Length = 2722
Score = 67.0 bits (162), Expect = 2e-09
Identities = 38/86 (44%), Positives = 55/86 (63%)
Frame = -2
Query: 259 DSFKHEGSSGERLNLLLSCFIXXXXXXXXXXXLEREANLVPTIFSALSLSTASDAIIYPV 80
+ FK E +S E+ + LLSCF+ L + NLVP IFS +S+S+AS+A+IY V
Sbjct: 1248 EKFKQESASSEKPSSLLSCFLSMSANNKLVALLCWKENLVPDIFSIISVSSASEAVIYCV 1307
Query: 79 LEFIENLLNLDNSEDHLENKSVKNLL 2
L+F+ENLL+LDN + +N + LL
Sbjct: 1308 LKFVENLLSLDNQFNGEDNAAQGVLL 1333