BLASTX nr result
ID: Zingiber24_contig00046509
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046509
(250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare] 109 3e-22
ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 108 6e-22
dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Gr... 108 6e-22
gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indi... 108 6e-22
ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group] g... 108 6e-22
ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [S... 106 4e-21
ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 105 8e-21
dbj|BAJ86692.1| predicted protein [Hordeum vulgare subsp. vulgare] 105 8e-21
ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|1... 105 8e-21
tpg|DAA46363.1| TPA: putative RING zinc finger domain superfamil... 104 1e-20
ref|XP_004983612.1| PREDICTED: E3 ubiquitin-protein ligase Os03g... 103 2e-20
ref|XP_002467469.1| hypothetical protein SORBIDRAFT_01g028660 [S... 103 2e-20
gb|ABB47999.1| Zinc finger, C3HC4 type family protein, expressed... 102 5e-20
gb|AAL79708.1|AC087599_27 putative zinc finger protein [Oryza sa... 102 5e-20
gb|AFW87807.1| putative RING zinc finger domain superfamily prot... 101 9e-20
ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 100 3e-19
tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamil... 99 4e-19
ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea ma... 99 4e-19
gb|EEE51423.1| hypothetical protein OsJ_32501 [Oryza sativa Japo... 99 6e-19
ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|1... 99 6e-19
>dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 109 bits (273), Expect = 3e-22
Identities = 54/91 (59%), Positives = 64/91 (70%), Gaps = 9/91 (9%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPL--TQPG 175
DCAVCL PF+P ELRLLPACRHAFH+ CVD WLR+TP CPLCRA+I++P PPL G
Sbjct: 150 DCAVCLSPFVPDAELRLLPACRHAFHAACVDAWLRNTPSCPLCRAAISLPHPPLPAAYTG 209
Query: 176 ATTADP-------STIGSYRVEIGIVSQRRA 247
A +P + S+RVEIG VS RR+
Sbjct: 210 AAQQEPLDARSSSNASRSFRVEIGSVSNRRS 240
>ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
Length = 402
Score = 108 bits (271), Expect = 6e-22
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 16/98 (16%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPL--TQPG 175
DCAVCL PF P ELRLLPACRHAFH+ CVD WLR+TP CPLCRA++++P PPL P
Sbjct: 154 DCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVSLPHPPLPTAAPA 213
Query: 176 ATTADP-------STIG-------SYRVEIGIVSQRRA 247
A A P S +G S+RVEIG VS RR+
Sbjct: 214 AAAAGPGAQEPLDSRVGGSSNNSRSFRVEIGSVSNRRS 251
>dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Group]
Length = 502
Score = 108 bits (271), Expect = 6e-22
Identities = 53/94 (56%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVCL PF P ELRLLPACRHAFH+ CVD WLR+TP CPLCRA++++P PPL A
Sbjct: 277 DCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVSLPHPPLPTAAAA 336
Query: 182 TA------DP------STIGSYRVEIGIVSQRRA 247
A DP + S+RVEIG +S RR+
Sbjct: 337 AASNAAQQDPLDSRSSNNSRSFRVEIGSISNRRS 370
>gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indica Group]
Length = 267
Score = 108 bits (271), Expect = 6e-22
Identities = 53/94 (56%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVCL PF P ELRLLPACRHAFH+ CVD WLR+TP CPLCRA++++P PPL A
Sbjct: 42 DCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVSLPHPPLPTAAAA 101
Query: 182 TA------DP------STIGSYRVEIGIVSQRRA 247
A DP + S+RVEIG +S RR+
Sbjct: 102 AASNAAQQDPLDSRSSNNSRSFRVEIGSISNRRS 135
>ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group]
gi|113537311|dbj|BAF09694.1| Os02g0688800 [Oryza sativa
Japonica Group] gi|125583300|gb|EAZ24231.1| hypothetical
protein OsJ_07979 [Oryza sativa Japonica Group]
Length = 373
Score = 108 bits (271), Expect = 6e-22
Identities = 53/94 (56%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVCL PF P ELRLLPACRHAFH+ CVD WLR+TP CPLCRA++++P PPL A
Sbjct: 148 DCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVSLPHPPLPTAAAA 207
Query: 182 TA------DP------STIGSYRVEIGIVSQRRA 247
A DP + S+RVEIG +S RR+
Sbjct: 208 AASNAAQQDPLDSRSSNNSRSFRVEIGSISNRRS 241
>ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor]
gi|241934288|gb|EES07433.1| hypothetical protein
SORBIDRAFT_04g031430 [Sorghum bicolor]
Length = 400
Score = 106 bits (264), Expect = 4e-21
Identities = 56/98 (57%), Positives = 65/98 (66%), Gaps = 16/98 (16%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPL------ 163
DCAVCL PF P ELRLLPACRHAFH+ CVD WLR+TP CPLCRA++++P PPL
Sbjct: 150 DCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVSLPHPPLPTAPPP 209
Query: 164 -TQPGATTA---DP------STIGSYRVEIGIVSQRRA 247
QP A A +P S S+RVEIG VS RR+
Sbjct: 210 PPQPAAGPAAQQEPLDSRVSSNSRSFRVEIGSVSNRRS 247
>ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
distachyon]
Length = 443
Score = 105 bits (261), Expect = 8e-21
Identities = 53/94 (56%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPL------ 163
DCAVCL PFL ELRLLPACRHAFH+ CVD WLR+TP CPLCRA+I++P PPL
Sbjct: 211 DCAVCLSPFLADAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAISLPHPPLPTAAAA 270
Query: 164 TQPGATTADP------STIGSYRVEIGIVSQRRA 247
GA +P + S+RVEIG +S RR+
Sbjct: 271 AGAGAGLQEPLDSRSSTNSRSFRVEIGSISNRRS 304
>dbj|BAJ86692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 105 bits (261), Expect = 8e-21
Identities = 51/82 (62%), Positives = 56/82 (68%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVC C F DELRLLPACRHAFHS CVDPWLR+ P CPLCRASIA+P PPL +
Sbjct: 144 DCAVCQCVFCGDDELRLLPACRHAFHSGCVDPWLRANPSCPLCRASIALPYPPLPE---- 199
Query: 182 TADPSTIGSYRVEIGIVSQRRA 247
RVE+G VS RR+
Sbjct: 200 --------LLRVELGSVSSRRS 213
>ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|194689566|gb|ACF78867.1|
unknown [Zea mays] gi|194707760|gb|ACF87964.1| unknown
[Zea mays] gi|413938299|gb|AFW72850.1| putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 378
Score = 105 bits (261), Expect = 8e-21
Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPL-TQP-- 172
DCAVCL PF P +LRLLPACRHAFH+ CVD WLR+TP CPLCRA++++P PPL T P
Sbjct: 143 DCAVCLSPFSPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVSLPHPPLPTAPPL 202
Query: 173 ---------GATTADPSTIGSYRVEIGIVSQRRA 247
+ + S S+RVEIG VS RR+
Sbjct: 203 AAGSAQEALDSRVSSSSNSRSFRVEIGSVSNRRS 236
>tpg|DAA46363.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 379
Score = 104 bits (260), Expect = 1e-20
Identities = 51/82 (62%), Positives = 55/82 (67%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVC F DELRLLPACRHAFHS+CVDPWLR P CPLCRASIA+P PPLT
Sbjct: 154 DCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRGNPSCPLCRASIALPCPPLTD---- 209
Query: 182 TADPSTIGSYRVEIGIVSQRRA 247
RVE+G VS RR+
Sbjct: 210 --------LLRVELGSVSSRRS 223
>ref|XP_004983612.1| PREDICTED: E3 ubiquitin-protein ligase Os03g0188200-like [Setaria
italica]
Length = 393
Score = 103 bits (258), Expect = 2e-20
Identities = 51/82 (62%), Positives = 55/82 (67%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVC F DELRLLPACRHAFHS+CVDPWLR P CPLCRASIA+P PPLT
Sbjct: 165 DCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRGNPSCPLCRASIALPHPPLTD---- 220
Query: 182 TADPSTIGSYRVEIGIVSQRRA 247
RVE+G VS RR+
Sbjct: 221 --------LLRVELGSVSSRRS 234
>ref|XP_002467469.1| hypothetical protein SORBIDRAFT_01g028660 [Sorghum bicolor]
gi|241921323|gb|EER94467.1| hypothetical protein
SORBIDRAFT_01g028660 [Sorghum bicolor]
Length = 399
Score = 103 bits (258), Expect = 2e-20
Identities = 51/82 (62%), Positives = 55/82 (67%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVC F DELRLLPACRHAFHS+CVDPWLR P CPLCRASIA+P PPLT
Sbjct: 167 DCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRGNPSCPLCRASIALPHPPLTD---- 222
Query: 182 TADPSTIGSYRVEIGIVSQRRA 247
RVE+G VS RR+
Sbjct: 223 --------LLRVELGSVSSRRS 236
>gb|ABB47999.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group] gi|215766723|dbj|BAG98951.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 371
Score = 102 bits (254), Expect = 5e-20
Identities = 51/82 (62%), Positives = 57/82 (69%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVC F DELRLLPACRHAFHS+CVDPWLR+ P CPLCRASIA+P PPL
Sbjct: 145 DCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSCPLCRASIALPHPPL------ 198
Query: 182 TADPSTIGSYRVEIGIVSQRRA 247
P + RVE+G VS RR+
Sbjct: 199 ---PDLL---RVELGSVSSRRS 214
>gb|AAL79708.1|AC087599_27 putative zinc finger protein [Oryza sativa Japonica Group]
Length = 354
Score = 102 bits (254), Expect = 5e-20
Identities = 51/82 (62%), Positives = 57/82 (69%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVC F DELRLLPACRHAFHS+CVDPWLR+ P CPLCRASIA+P PPL
Sbjct: 128 DCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSCPLCRASIALPHPPL------ 181
Query: 182 TADPSTIGSYRVEIGIVSQRRA 247
P + RVE+G VS RR+
Sbjct: 182 ---PDLL---RVELGSVSSRRS 197
>gb|AFW87807.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 385
Score = 101 bits (252), Expect = 9e-20
Identities = 50/82 (60%), Positives = 55/82 (67%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVC F D LRLLPACRHAFHS+CVDPWLR+ P CPLCRASIA+P PPLT
Sbjct: 163 DCAVCQTAFRDDDGLRLLPACRHAFHSRCVDPWLRANPSCPLCRASIALPHPPLTD---- 218
Query: 182 TADPSTIGSYRVEIGIVSQRRA 247
RVE+G VS RR+
Sbjct: 219 --------LLRVELGSVSSRRS 232
>ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
Length = 256
Score = 99.8 bits (247), Expect = 3e-19
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVCL PF P LRLLP CRHAFH+ C+D WLR+ P CP+CR++++ P PPL P A
Sbjct: 26 DCAVCLSPFEPDAGLRLLPTCRHAFHAACIDAWLRTNPVCPICRSAVSFPLPPLPAPAAA 85
Query: 182 TADP-----STIGSYRVEIGIVSQR 241
++ S+RVE+G VS R
Sbjct: 86 AGQEPLGSRTSSRSFRVELGSVSNR 110
>tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 397
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVCL PF P +LRLLPACRHAFH+ CVD WLR+TP CPLCRA++A+P P L+ A
Sbjct: 146 DCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVALPHPSLSGMLAA 205
Query: 182 TA-----DPSTIGSYRVEIGIVSQR 241
P S+ VE+G VS R
Sbjct: 206 AQARARDRPGPGSSFLVEMGTVSNR 230
>ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea mays]
gi|194702970|gb|ACF85569.1| unknown [Zea mays]
Length = 265
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/85 (56%), Positives = 57/85 (67%), Gaps = 5/85 (5%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVCL PF P +LRLLPACRHAFH+ CVD WLR+TP CPLCRA++A+P P L+ A
Sbjct: 14 DCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVALPHPSLSGMLAA 73
Query: 182 TA-----DPSTIGSYRVEIGIVSQR 241
P S+ VE+G VS R
Sbjct: 74 AQARARDRPGPGSSFLVEMGTVSNR 98
>gb|EEE51423.1| hypothetical protein OsJ_32501 [Oryza sativa Japonica Group]
Length = 318
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/73 (65%), Positives = 53/73 (72%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLTQPGAT 181
DCAVC F DELRLLPACRHAFHS+CVDPWLR+ P CPLCRASIA+P PPL P
Sbjct: 128 DCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRANPSCPLCRASIALPHPPL--PDLL 185
Query: 182 TADPSTIGSYRVE 220
+ +GSY VE
Sbjct: 186 RVE---LGSYLVE 195
>ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|195651079|gb|ACG45007.1|
RING-H2 finger protein ATL3J [Zea mays]
Length = 397
Score = 99.0 bits (245), Expect = 6e-19
Identities = 49/87 (56%), Positives = 59/87 (67%), Gaps = 7/87 (8%)
Frame = +2
Query: 2 DCAVCLCPFLPHDELRLLPACRHAFHSQCVDPWLRSTPFCPLCRASIAIPAPPLT--QPG 175
DCAVCL PF P +LRLLPACRHAFH+ CVD WLR+TP CPLCRA++A+P P L+
Sbjct: 144 DCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVALPHPSLSGMLAA 203
Query: 176 ATTADPSTIG-----SYRVEIGIVSQR 241
A P+ G S+ VE+G VS R
Sbjct: 204 AQAQRPARPGPGPGPSFLVEMGTVSSR 230