BLASTX nr result
ID: Zingiber24_contig00046474
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046474
(268 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAI53855.1| ycf2 [Acorus calamus] 53 7e-13
ref|YP_319807.1| Ycf2 [Acorus calamus] gi|126022805|ref|YP_31982... 53 7e-13
ref|YP_001586225.1| hypothetical protein RF2 [Acorus americanus]... 53 7e-13
ref|YP_008963522.1| hypothetical chloroplast RF21 (chloroplast) ... 52 9e-13
gb|ABQ14892.1| Ycf2 [Penthorum chinense] 52 9e-13
gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia] 54 1e-12
gb|ABQ14823.1| Ycf2 [Daphniphyllum sp. 205-82] 52 1e-12
gb|ABQ14926.1| Ycf2 [Ribes americanum] 52 1e-12
ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) ... 52 1e-12
gb|ABQ14867.1| Ycf2 [Liquidambar styraciflua] gi|290489024|gb|AD... 52 1e-12
gb|ABQ14815.1| Ycf2 [Cercidiphyllum japonicum] 52 1e-12
gb|ABQ14917.1| Ycf2 [Rhodoleia championii] 52 1e-12
gb|ABQ14831.1| Ycf2 [Hamamelis japonica] 52 1e-12
gb|ABQ14899.1| Ycf2 [Peridiscus lucidus] 52 1e-12
gb|ADD30897.1| putative RF2 protein [Oxalis latifolia] gi|340807... 52 1e-12
gb|ABQ14876.1| Ycf2 [Myriophyllum spicatum] 52 2e-12
ref|YP_008854638.1| hypothetical chloroplast RF21 [Curcuma rosco... 56 2e-12
gb|AGE93413.1| hypothetical chloroplast RF21 [Alpinia zerumbet] ... 56 2e-12
gb|AEZ48752.1| hypothetical chloroplast RF2, partial [Renealmia ... 56 2e-12
gb|ABQ14849.1| Ycf2 [Itea virginica] 52 3e-12
>emb|CAI53855.1| ycf2 [Acorus calamus]
Length = 2091
Score = 52.8 bits (125), Expect(2) = 7e-13
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +2
Query: 134 MSRTHLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
M THLR TN REFLYSI+FL LVA YLVR HLL
Sbjct: 1200 MILTHLRSTNAREFLYSILFLLLVAGYLVRTHLL 1233
Score = 46.2 bits (108), Expect(2) = 7e-13
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNESDTSEI 156
NLISEI KCL NLLL EEMIH+NNES S I
Sbjct: 1170 NLISEISSKCLQNLLLSEEMIHRNNESPVSMI 1201
>ref|YP_319807.1| Ycf2 [Acorus calamus] gi|126022805|ref|YP_319824.2| Ycf2 [Acorus
calamus] gi|109896296|sp|Q3V4Z0.1|YCF2_ACOCL RecName:
Full=Protein Ycf2 gi|74381753|emb|CAI53838.1| ycf2
[Acorus calamus] gi|156573627|gb|ABU85148.1| hypothetical
protein RF2 [Acorus americanus]
Length = 2076
Score = 52.8 bits (125), Expect(2) = 7e-13
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +2
Query: 134 MSRTHLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
M THLR TN REFLYSI+FL LVA YLVR HLL
Sbjct: 1185 MILTHLRSTNAREFLYSILFLLLVAGYLVRTHLL 1218
Score = 46.2 bits (108), Expect(2) = 7e-13
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNESDTSEI 156
NLISEI KCL NLLL EEMIH+NNES S I
Sbjct: 1155 NLISEISSKCLQNLLLSEEMIHRNNESPVSMI 1186
>ref|YP_001586225.1| hypothetical protein RF2 [Acorus americanus]
gi|161622370|ref|YP_001586242.1| hypothetical protein RF2
[Acorus americanus] gi|205412763|sp|A9LYE4.1|YCF2_ACOAM
RecName: Full=Protein Ycf2 gi|160369896|gb|ABX38787.1|
hypothetical protein RF2 [Acorus americanus]
gi|160369913|gb|ABX38804.1| hypothetical protein RF2
[Acorus americanus]
Length = 2076
Score = 52.8 bits (125), Expect(2) = 7e-13
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +2
Query: 134 MSRTHLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
M THLR TN REFLYSI+FL LVA YLVR HLL
Sbjct: 1185 MILTHLRSTNAREFLYSILFLLLVAGYLVRTHLL 1218
Score = 46.2 bits (108), Expect(2) = 7e-13
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNESDTSEI 156
NLISEI KCL NLLL EEMIH+NNES S I
Sbjct: 1155 NLISEISSKCLQNLLLSEEMIHRNNESPVSMI 1186
>ref|YP_008963522.1| hypothetical chloroplast RF21 (chloroplast) [Penthorum chinense]
gi|568244793|ref|YP_008963539.1| hypothetical chloroplast
RF21 (chloroplast) [Penthorum chinense]
gi|403226823|gb|AFR25702.1| hypothetical chloroplast RF21
(chloroplast) [Penthorum chinense]
gi|403226840|gb|AFR25719.1| hypothetical chloroplast RF21
(chloroplast) [Penthorum chinense]
Length = 2312
Score = 52.0 bits (123), Expect(2) = 9e-13
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1332 THLRSPNVREFLYSILFLLLVAAYLVRTHLL 1362
Score = 46.6 bits (109), Expect(2) = 9e-13
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1301 NLISEISRKCLHNLLLSEEMIHRNNES 1327
>gb|ABQ14892.1| Ycf2 [Penthorum chinense]
Length = 2053
Score = 52.0 bits (123), Expect(2) = 9e-13
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1332 THLRSPNVREFLYSILFLLLVAAYLVRTHLL 1362
Score = 46.6 bits (109), Expect(2) = 9e-13
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1301 NLISEISRKCLHNLLLSEEMIHRNNES 1327
>gb|AEK71853.1| hypothetical chloroplast RF2 [Cissus rotundifolia]
Length = 2307
Score = 53.9 bits (128), Expect(2) = 1e-12
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLRL NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1335 THLRLPNVREFLYSILFLLLVAGYLVRTHLL 1365
Score = 44.3 bits (103), Expect(2) = 1e-12
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI KCL NLLL EEMIH+NNES
Sbjct: 1304 NLISEISSKCLHNLLLSEEMIHRNNES 1330
>gb|ABQ14823.1| Ycf2 [Daphniphyllum sp. 205-82]
Length = 2303
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1330 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1360
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1299 NLISEISRKCLHNLLLSEEMIHRNNES 1325
>gb|ABQ14926.1| Ycf2 [Ribes americanum]
Length = 2301
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1334 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1364
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1303 NLISEISRKCLHNLLLSEEMIHRNNES 1329
>ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) [Liquidambar formosana]
gi|568244972|ref|YP_008963754.1| hypothetical chloroplast
RF21 (chloroplast) [Liquidambar formosana]
gi|491650414|gb|AGL13474.1| hypothetical chloroplast RF21
(chloroplast) [Liquidambar formosana]
gi|491650433|gb|AGL13493.1| hypothetical chloroplast RF21
(chloroplast) [Liquidambar formosana]
Length = 2297
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1330 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1360
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1299 NLISEISRKCLHNLLLSEEMIHRNNES 1325
>gb|ABQ14867.1| Ycf2 [Liquidambar styraciflua] gi|290489024|gb|ADD30896.1| putative
RF2 protein [Liquidambar styraciflua]
gi|340807164|gb|AEK71758.1| hypothetical chloroplast RF2
[Liquidambar styraciflua]
Length = 2297
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1330 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1360
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1299 NLISEISRKCLHNLLLSEEMIHRNNES 1325
>gb|ABQ14815.1| Ycf2 [Cercidiphyllum japonicum]
Length = 2295
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1328 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1358
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1297 NLISEISRKCLHNLLLSEEMIHRNNES 1323
>gb|ABQ14917.1| Ycf2 [Rhodoleia championii]
Length = 2294
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1330 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1360
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1299 NLISEISRKCLHNLLLSEEMIHRNNES 1325
>gb|ABQ14831.1| Ycf2 [Hamamelis japonica]
Length = 2292
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1330 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1360
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1299 NLISEISRKCLHNLLLSEEMIHRNNES 1325
>gb|ABQ14899.1| Ycf2 [Peridiscus lucidus]
Length = 2286
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1328 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1358
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EEMIH+NNES
Sbjct: 1297 NLISEISRKCLHNLLLSEEMIHRNNES 1323
>gb|ADD30897.1| putative RF2 protein [Oxalis latifolia] gi|340807132|gb|AEK71730.1|
hypothetical chloroplast RF2 [Oxalis latifolia]
Length = 2280
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1328 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1358
Score = 46.6 bits (109), Expect(2) = 1e-12
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEIL KCL NLLL EEMIH+NNES
Sbjct: 1297 NLISEILSKCLHNLLLSEEMIHRNNES 1323
>gb|ABQ14876.1| Ycf2 [Myriophyllum spicatum]
Length = 2295
Score = 52.0 bits (123), Expect(2) = 2e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1325 THLRSPNVREFLYSILFLLLVAAYLVRTHLL 1355
Score = 45.4 bits (106), Expect(2) = 2e-12
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EE+IH+NNES
Sbjct: 1294 NLISEISRKCLHNLLLSEELIHRNNES 1320
>ref|YP_008854638.1| hypothetical chloroplast RF21 [Curcuma roscoeana]
gi|567853753|ref|YP_008854655.1| hypothetical chloroplast
RF21 [Curcuma roscoeana] gi|557637545|gb|AHA13140.1|
hypothetical chloroplast RF21 [Curcuma roscoeana]
gi|557637563|gb|AHA13158.1| hypothetical chloroplast RF21
[Curcuma roscoeana]
Length = 2269
Score = 55.8 bits (133), Expect(2) = 2e-12
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLRLTN REFLYSI+FL LVA YLVR+HLL
Sbjct: 1310 THLRLTNAREFLYSILFLLLVAGYLVRIHLL 1340
Score = 41.6 bits (96), Expect(2) = 2e-12
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 58 SNLISEILRKCL*NLLLYEEMIHQNNES 141
S+LISEI KCL NLLL EE IH+NNES
Sbjct: 1276 SSLISEISSKCLQNLLLSEETIHRNNES 1303
>gb|AGE93413.1| hypothetical chloroplast RF21 [Alpinia zerumbet]
gi|449326854|gb|AGE93432.1| hypothetical chloroplast RF21
[Alpinia zerumbet]
Length = 2267
Score = 55.8 bits (133), Expect(2) = 2e-12
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLRLTN REFLYSI+FL LVA YLVR+HLL
Sbjct: 1316 THLRLTNAREFLYSILFLLLVAGYLVRIHLL 1346
Score = 41.6 bits (96), Expect(2) = 2e-12
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 58 SNLISEILRKCL*NLLLYEEMIHQNNES 141
S+LISEI KCL NLLL EE IH+NNES
Sbjct: 1282 SSLISEISSKCLQNLLLSEETIHRNNES 1309
>gb|AEZ48752.1| hypothetical chloroplast RF2, partial [Renealmia alpinia]
Length = 2260
Score = 55.8 bits (133), Expect(2) = 2e-12
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLRLTN REFLYSI+FL LVA YLVR+HLL
Sbjct: 1310 THLRLTNAREFLYSILFLLLVAGYLVRIHLL 1340
Score = 41.6 bits (96), Expect(2) = 2e-12
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 58 SNLISEILRKCL*NLLLYEEMIHQNNES 141
S+LISEI KCL NLLL EE IH+NNES
Sbjct: 1276 SSLISEISSKCLQNLLLSEETIHRNNES 1303
>gb|ABQ14849.1| Ycf2 [Itea virginica]
Length = 2306
Score = 51.6 bits (122), Expect(2) = 3e-12
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 143 THLRLTNVREFLYSIIFLFLVARYLVRVHLL 235
THLR NVREFLYSI+FL LVA YLVR HLL
Sbjct: 1330 THLRSPNVREFLYSILFLLLVAGYLVRTHLL 1360
Score = 45.1 bits (105), Expect(2) = 3e-12
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1
Query: 61 NLISEILRKCL*NLLLYEEMIHQNNES 141
NLISEI RKCL NLLL EE+IH+NNES
Sbjct: 1299 NLISEISRKCLHNLLLSEEVIHRNNES 1325