BLASTX nr result
ID: Zingiber24_contig00046456
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046456
(352 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006643885.1| PREDICTED: pentatricopeptide repeat-containi... 135 7e-30
ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group] g... 135 7e-30
gb|EAY72948.1| hypothetical protein OsI_00820 [Oryza sativa Indi... 135 7e-30
ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containi... 131 8e-29
ref|XP_004973954.1| PREDICTED: pentatricopeptide repeat-containi... 129 3e-28
gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus pe... 122 5e-26
gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis] 122 6e-26
ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containi... 122 6e-26
tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea m... 122 6e-26
ref|XP_006449535.1| hypothetical protein CICLE_v10014413mg [Citr... 120 2e-25
ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
emb|CBI30711.3| unnamed protein product [Vitis vinifera] 120 2e-25
ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [S... 120 2e-25
ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
gb|ESW20019.1| hypothetical protein PHAVU_006G174200g [Phaseolus... 118 7e-25
ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutr... 118 7e-25
gb|EMT00538.1| hypothetical protein F775_11073 [Aegilops tauschii] 118 7e-25
gb|ESW31464.1| hypothetical protein PHAVU_002G240000g [Phaseolus... 117 2e-24
ref|XP_002870024.1| pentatricopeptide repeat-containing protein ... 117 2e-24
dbj|BAD94843.1| putative protein [Arabidopsis thaliana] 117 2e-24
>ref|XP_006643885.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Oryza brachyantha]
Length = 658
Score = 135 bits (339), Expect = 7e-30
Identities = 59/78 (75%), Positives = 67/78 (85%)
Frame = -3
Query: 350 ATREEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRD 171
A +EALCGHS KLA+AFG+LN S+G+P+RVTKNSRVC CH AKFISKM REI+LRD
Sbjct: 581 AVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRD 640
Query: 170 SNRFHHFVQGRCSCRGYW 117
SNRFHHF +GRCSCRGYW
Sbjct: 641 SNRFHHFEEGRCSCRGYW 658
>ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat
protein -like [Oryza sativa Japonica Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa
Japonica Group]
Length = 658
Score = 135 bits (339), Expect = 7e-30
Identities = 59/78 (75%), Positives = 67/78 (85%)
Frame = -3
Query: 350 ATREEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRD 171
A +EALCGHS KLA+AFG+LN S+G+P+RVTKNSRVC CH AKFISKM REI+LRD
Sbjct: 581 AVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRD 640
Query: 170 SNRFHHFVQGRCSCRGYW 117
SNRFHHF +GRCSCRGYW
Sbjct: 641 SNRFHHFEEGRCSCRGYW 658
>gb|EAY72948.1| hypothetical protein OsI_00820 [Oryza sativa Indica Group]
Length = 370
Score = 135 bits (339), Expect = 7e-30
Identities = 59/78 (75%), Positives = 67/78 (85%)
Frame = -3
Query: 350 ATREEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRD 171
A +EALCGHS KLA+AFG+LN S+G+P+RVTKNSRVC CH AKFISKM REI+LRD
Sbjct: 293 AVHDEALCGHSSKLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRD 352
Query: 170 SNRFHHFVQGRCSCRGYW 117
SNRFHHF +GRCSCRGYW
Sbjct: 353 SNRFHHFEEGRCSCRGYW 370
>ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 131 bits (330), Expect = 8e-29
Identities = 59/78 (75%), Positives = 65/78 (83%)
Frame = -3
Query: 350 ATREEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRD 171
A EALCGHS KLA+AFG+LN S+G+ +RVTKNSRVC CH AKFISKM REI+LRD
Sbjct: 793 AVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRD 852
Query: 170 SNRFHHFVQGRCSCRGYW 117
SNRFHHF QGRCSCRGYW
Sbjct: 853 SNRFHHFEQGRCSCRGYW 870
>ref|XP_004973954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Setaria italica]
Length = 1088
Score = 129 bits (325), Expect = 3e-28
Identities = 59/77 (76%), Positives = 66/77 (85%)
Frame = -3
Query: 350 ATREEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRD 171
A +EALCGHS KLAIAFG+LN S+G+PVRVTKNSRVC CH AKFISKM REI+LRD
Sbjct: 1011 AVHDEALCGHSSKLAIAFGVLNLSEGRPVRVTKNSRVCSHCHESAKFISKMCNREIILRD 1070
Query: 170 SNRFHHFVQGRCSCRGY 120
S+RFHHF +GRCSCRGY
Sbjct: 1071 SSRFHHFEEGRCSCRGY 1087
>gb|EMJ15466.1| hypothetical protein PRUPE_ppa025121mg [Prunus persica]
Length = 796
Score = 122 bits (306), Expect = 5e-26
Identities = 56/76 (73%), Positives = 62/76 (81%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E ALCGHSEKLAIAFGILN GK +RVTKN RVC CH +AKFISK S+REI+LRDSN
Sbjct: 721 KEVALCGHSEKLAIAFGILNLPPGKTIRVTKNLRVCSDCHEMAKFISKTSRREIVLRDSN 780
Query: 164 RFHHFVQGRCSCRGYW 117
RFHH G CSCRG+W
Sbjct: 781 RFHHMKDGICSCRGFW 796
>gb|EXB84044.1| hypothetical protein L484_005808 [Morus notabilis]
Length = 877
Score = 122 bits (305), Expect = 6e-26
Identities = 55/76 (72%), Positives = 62/76 (81%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E ALCGHSEKLA+AFG+L+ GK +RVTKN RVC CH AKFISKMS REI+LRDSN
Sbjct: 802 KEVALCGHSEKLAMAFGMLSLPPGKTIRVTKNLRVCGDCHETAKFISKMSSREIVLRDSN 861
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF G CSCRG+W
Sbjct: 862 RFHHFKDGHCSCRGFW 877
>ref|XP_006467621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Citrus sinensis]
Length = 872
Score = 122 bits (305), Expect = 6e-26
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E ALCGHSEKLA+AFGILN G+ +RVTKN RVC CH +AKF+SK ++REI+LRDSN
Sbjct: 797 KEVALCGHSEKLAMAFGILNLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 856
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF GRCSCRG+W
Sbjct: 857 RFHHFKDGRCSCRGFW 872
>tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 122 bits (305), Expect = 6e-26
Identities = 54/77 (70%), Positives = 63/77 (81%)
Frame = -3
Query: 350 ATREEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRD 171
A +EALCGHS KLA+AFG+LN +G+P+RVTKNS+VC CH AKFISKM REI+LRD
Sbjct: 1014 AVHDEALCGHSSKLAVAFGVLNLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRD 1073
Query: 170 SNRFHHFVQGRCSCRGY 120
S+RFH F GRCSCRGY
Sbjct: 1074 SSRFHRFEGGRCSCRGY 1090
>ref|XP_006449535.1| hypothetical protein CICLE_v10014413mg [Citrus clementina]
gi|557552146|gb|ESR62775.1| hypothetical protein
CICLE_v10014413mg [Citrus clementina]
Length = 725
Score = 120 bits (300), Expect = 2e-25
Identities = 53/76 (69%), Positives = 64/76 (84%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E ALCGHSEKLA+AFGIL+ G+ +RVTKN RVC CH +AKF+SK ++REI+LRDSN
Sbjct: 650 KEVALCGHSEKLAMAFGILSLPAGQTIRVTKNLRVCGDCHEMAKFMSKTARREIVLRDSN 709
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF GRCSCRG+W
Sbjct: 710 RFHHFKDGRCSCRGFW 725
>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 120 bits (300), Expect = 2e-25
Identities = 54/76 (71%), Positives = 63/76 (82%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E ALCGHSEK+A+AFGIL+ GK VRVTKN RVC CH +AKF+SKM KR+I+LRDSN
Sbjct: 749 KEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSN 808
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF G CSCRG+W
Sbjct: 809 RFHHFKDGSCSCRGHW 824
>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 120 bits (300), Expect = 2e-25
Identities = 54/76 (71%), Positives = 63/76 (82%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E ALCGHSEK+A+AFGIL+ GK VRVTKN RVC CH +AKF+SKM KR+I+LRDSN
Sbjct: 622 KEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSN 681
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF G CSCRG+W
Sbjct: 682 RFHHFKDGSCSCRGHW 697
>ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein
SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 120 bits (300), Expect = 2e-25
Identities = 52/78 (66%), Positives = 64/78 (82%)
Frame = -3
Query: 350 ATREEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRD 171
A +EALCGHS KLA+ FG+L+ +G+P+RVTKNS+VC CH AKFISKM REI+LRD
Sbjct: 1007 AVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRD 1066
Query: 170 SNRFHHFVQGRCSCRGYW 117
S+RFHHF GRCSCRG++
Sbjct: 1067 SSRFHHFEGGRCSCRGHF 1084
>ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 119 bits (298), Expect = 4e-25
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E ALCGHSEKLA+AFG+LN GK +RVTKN RVC CH +AKF+SK + REI+LRDS+
Sbjct: 851 KEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRDSS 910
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF G CSCRGYW
Sbjct: 911 RFHHFKDGSCSCRGYW 926
>gb|ESW20019.1| hypothetical protein PHAVU_006G174200g [Phaseolus vulgaris]
Length = 871
Score = 118 bits (296), Expect = 7e-25
Identities = 52/76 (68%), Positives = 62/76 (81%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E ALCGHSEKLA+AFGILN S G+ +RVTKN RVC CH + KF+SK ++REI+LRDSN
Sbjct: 796 KEVALCGHSEKLAVAFGILNLSPGRTIRVTKNLRVCGDCHEMVKFLSKTTRREIILRDSN 855
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF G CSCR +W
Sbjct: 856 RFHHFKDGFCSCRDFW 871
>ref|XP_006414062.1| hypothetical protein EUTSA_v10024377mg [Eutrema salsugineum]
gi|557115232|gb|ESQ55515.1| hypothetical protein
EUTSA_v10024377mg [Eutrema salsugineum]
Length = 872
Score = 118 bits (296), Expect = 7e-25
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+EEALCGHSEKLA+A GIL+ GK +RVTKN RVC CH +AK +SK+++REI+LRDSN
Sbjct: 797 KEEALCGHSEKLAMALGILSSGHGKIIRVTKNLRVCGDCHEMAKLMSKLTRREIVLRDSN 856
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF G CSCRG+W
Sbjct: 857 RFHHFKDGHCSCRGFW 872
>gb|EMT00538.1| hypothetical protein F775_11073 [Aegilops tauschii]
Length = 1172
Score = 118 bits (296), Expect = 7e-25
Identities = 53/72 (73%), Positives = 60/72 (83%)
Frame = -3
Query: 350 ATREEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRD 171
A E+LCGHS KLA+AFG+LN S+G+P+RVTKNSRVC CH AKFISKM REI+LRD
Sbjct: 1025 AVNGESLCGHSSKLAVAFGVLNLSEGRPIRVTKNSRVCTHCHEAAKFISKMCSREIILRD 1084
Query: 170 SNRFHHFVQGRC 135
SNRFHHF QGRC
Sbjct: 1085 SNRFHHFEQGRC 1096
>gb|ESW31464.1| hypothetical protein PHAVU_002G240000g [Phaseolus vulgaris]
Length = 618
Score = 117 bits (292), Expect = 2e-24
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+E LCGHSEKLA+AFGILN S GK VRVTKN RVC CH++ KF+SK + R+I+LRDSN
Sbjct: 543 KEVLLCGHSEKLAMAFGILNLSPGKTVRVTKNLRVCGDCHDMGKFMSKTTGRDIVLRDSN 602
Query: 164 RFHHFVQGRCSCRGYW 117
RFHHF G CSCRG+W
Sbjct: 603 RFHHFKDGVCSCRGFW 618
>ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315860|gb|EFH46283.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 871
Score = 117 bits (292), Expect = 2e-24
Identities = 51/76 (67%), Positives = 63/76 (82%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+EEALCGHSEKLA+A GI++ GK +RVTKN RVC CH +AKF+SK+++REI+LRDSN
Sbjct: 796 KEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSN 855
Query: 164 RFHHFVQGRCSCRGYW 117
RFH F G CSCRG+W
Sbjct: 856 RFHQFKDGHCSCRGFW 871
>dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 117 bits (292), Expect = 2e-24
Identities = 51/76 (67%), Positives = 63/76 (82%)
Frame = -3
Query: 344 REEALCGHSEKLAIAFGILNCSKGKPVRVTKNSRVCIGCHNVAKFISKMSKREILLRDSN 165
+EEALCGHSEKLA+A GI++ GK +RVTKN RVC CH +AKF+SK+++REI+LRDSN
Sbjct: 645 KEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSN 704
Query: 164 RFHHFVQGRCSCRGYW 117
RFH F G CSCRG+W
Sbjct: 705 RFHQFKDGHCSCRGFW 720