BLASTX nr result

ID: Zingiber24_contig00046452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046452
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB51824.1| Heterogeneous nuclear ribonucleoprotein U-like pr...   124   1e-26
gb|EMJ14765.1| hypothetical protein PRUPE_ppa015772mg [Prunus pe...   120   1e-25
gb|EEE61765.1| hypothetical protein OsJ_16318 [Oryza sativa Japo...   120   2e-25
emb|CAH67657.1| H0410G08.12 [Oryza sativa Indica Group]               120   2e-25
ref|NP_001054013.2| Os04g0636000 [Oryza sativa Japonica Group] g...   120   2e-25
ref|XP_006653800.1| PREDICTED: heterogeneous nuclear ribonucleop...   119   4e-25
dbj|BAJ97470.1| predicted protein [Hordeum vulgare subsp. vulgare]    119   4e-25
dbj|BAJ90078.1| predicted protein [Hordeum vulgare subsp. vulgare]    119   4e-25
ref|XP_004158025.1| PREDICTED: heterogeneous nuclear ribonucleop...   117   2e-24
ref|XP_004146582.1| PREDICTED: heterogeneous nuclear ribonucleop...   117   2e-24
dbj|BAJ88270.1| predicted protein [Hordeum vulgare subsp. vulgare]    116   3e-24
ref|XP_004485703.1| PREDICTED: heterogeneous nuclear ribonucleop...   115   8e-24
ref|XP_004485702.1| PREDICTED: heterogeneous nuclear ribonucleop...   115   8e-24
ref|XP_006841811.1| hypothetical protein AMTR_s00003p00269470 [A...   114   1e-23
ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleop...   114   2e-23
ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleop...   114   2e-23
emb|CBI23309.3| unnamed protein product [Vitis vinifera]              114   2e-23
emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]   114   2e-23
ref|XP_004976964.1| PREDICTED: heterogeneous nuclear ribonucleop...   113   2e-23
ref|XP_002448605.1| hypothetical protein SORBIDRAFT_06g029970 [S...   113   2e-23

>gb|EXB51824.1| Heterogeneous nuclear ribonucleoprotein U-like protein 1 [Morus
           notabilis]
          Length = 853

 Score =  124 bits (311), Expect = 1e-26
 Identities = 58/85 (68%), Positives = 68/85 (80%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           DYG  FGVGDTI+CTV+LE+KP +SIGFSKNGK LG+A  FDA   G+G    P R   W
Sbjct: 145 DYGEKFGVGDTIVCTVNLEEKPFASIGFSKNGKWLGIAKKFDAGPKGLGVVHSPVRKLQW 204

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           +SAF+PHVLLKNVVVQLQF++EDGL
Sbjct: 205 KSAFYPHVLLKNVVVQLQFSVEDGL 229


>gb|EMJ14765.1| hypothetical protein PRUPE_ppa015772mg [Prunus persica]
          Length = 651

 Score =  120 bits (302), Expect = 1e-25
 Identities = 54/85 (63%), Positives = 69/85 (81%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           DYG  FG+GDTI+C+V+LE K ++SIGFSKNGK LG A +FD S++G+  +  P R  PW
Sbjct: 150 DYGEKFGLGDTIVCSVNLEDKSMASIGFSKNGKWLGRATYFDVSALGLSVADSPERKMPW 209

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           +SA FPHVLLKNVVV+LQF++EDGL
Sbjct: 210 QSAVFPHVLLKNVVVELQFSVEDGL 234


>gb|EEE61765.1| hypothetical protein OsJ_16318 [Oryza sativa Japonica Group]
          Length = 717

 Score =  120 bits (301), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDT++C VDL+ KPL+SIGFS+NG+ LG+A HFDAS  G+G    P  S  W
Sbjct: 144 EYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQW 203

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNVVV++QF+ EDGL
Sbjct: 204 ESAIFPHVLLKNVVVEMQFSKEDGL 228


>emb|CAH67657.1| H0410G08.12 [Oryza sativa Indica Group]
          Length = 717

 Score =  120 bits (301), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDT++C VDL+ KPL+SIGFS+NG+ LG+A HFDAS  G+G    P  S  W
Sbjct: 144 EYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQW 203

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNVVV++QF+ EDGL
Sbjct: 204 ESAIFPHVLLKNVVVEMQFSKEDGL 228


>ref|NP_001054013.2| Os04g0636000 [Oryza sativa Japonica Group]
           gi|38344809|emb|CAE03010.2| OSJNBa0043L09.29 [Oryza
           sativa Japonica Group] gi|255675811|dbj|BAF15927.2|
           Os04g0636000 [Oryza sativa Japonica Group]
          Length = 717

 Score =  120 bits (301), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 67/85 (78%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDT++C VDL+ KPL+SIGFS+NG+ LG+A HFDAS  G+G    P  S  W
Sbjct: 144 EYGVKFGVGDTVVCAVDLDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVESPVSSMQW 203

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNVVV++QF+ EDGL
Sbjct: 204 ESAIFPHVLLKNVVVEMQFSKEDGL 228


>ref|XP_006653800.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like, partial [Oryza brachyantha]
          Length = 665

 Score =  119 bits (298), Expect = 4e-25
 Identities = 56/85 (65%), Positives = 66/85 (77%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDTI+C VDL+ KPL+SIGFS+NG+ LG+A HFDAS  G+G  A P     W
Sbjct: 95  EYGVKFGVGDTIVCAVDLDSKPLASIGFSRNGEWLGIAKHFDASDKGLGLVAAPVSPMQW 154

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNVVV++QF  EDGL
Sbjct: 155 ESAIFPHVLLKNVVVEMQFIREDGL 179


>dbj|BAJ97470.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  119 bits (298), Expect = 4e-25
 Identities = 54/85 (63%), Positives = 68/85 (80%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           DYG+ FG+GDTI+C VDL+ KP++SIGF+KNG+ LG+A +FDAS  G+G    P R   W
Sbjct: 141 DYGARFGIGDTIVCAVDLDSKPMASIGFAKNGEWLGIAKYFDASHKGLGLVDAPVRPMQW 200

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNVVV++QF+ EDGL
Sbjct: 201 ESAIFPHVLLKNVVVEMQFSREDGL 225


>dbj|BAJ90078.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  119 bits (298), Expect = 4e-25
 Identities = 54/85 (63%), Positives = 68/85 (80%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           DYG+ FG+GDTI+C VDL+ KP++SIGF+KNG+ LG+A +FDAS  G+G    P R   W
Sbjct: 141 DYGARFGIGDTIVCAVDLDSKPMASIGFAKNGEWLGIAKYFDASHKGLGLVDAPVRPMQW 200

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNVVV++QF+ EDGL
Sbjct: 201 ESAIFPHVLLKNVVVEMQFSREDGL 225


>ref|XP_004158025.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Cucumis sativus]
          Length = 595

 Score =  117 bits (292), Expect = 2e-24
 Identities = 56/85 (65%), Positives = 65/85 (76%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           DYG  FG GD+I+C V+LE KPL+SIGFSKNGK LG ++ FDA   G+G    P R   W
Sbjct: 143 DYGEKFGFGDSIVCAVNLESKPLASIGFSKNGKWLGTSIQFDAGPRGLGVVDSPLRKCRW 202

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESAFFPHVLLKNV VQLQF+IE+GL
Sbjct: 203 ESAFFPHVLLKNVEVQLQFSIEEGL 227


>ref|XP_004146582.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Cucumis sativus]
          Length = 595

 Score =  117 bits (292), Expect = 2e-24
 Identities = 56/85 (65%), Positives = 65/85 (76%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           DYG  FG GD+I+C V+LE KPL+SIGFSKNGK LG ++ FDA   G+G    P R   W
Sbjct: 143 DYGEKFGFGDSIVCAVNLESKPLASIGFSKNGKWLGTSIQFDAGPRGLGVVDSPLRKCRW 202

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESAFFPHVLLKNV VQLQF+IE+GL
Sbjct: 203 ESAFFPHVLLKNVEVQLQFSIEEGL 227


>dbj|BAJ88270.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 608

 Score =  116 bits (290), Expect = 3e-24
 Identities = 54/85 (63%), Positives = 67/85 (78%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           DYG+ FGVGDTI+C VDL+ K ++SIGF+KNG+ LG+A +FDAS  G+G    P R   W
Sbjct: 141 DYGARFGVGDTIVCAVDLDTKSMASIGFAKNGEWLGIAKYFDASHKGLGLVDAPVRPMQW 200

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNVVV++QF+ EDGL
Sbjct: 201 ESAIFPHVLLKNVVVEMQFSREDGL 225


>ref|XP_004485703.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like isoform X2 [Cicer arietinum]
          Length = 690

 Score =  115 bits (287), Expect = 8e-24
 Identities = 53/86 (61%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGA-SAMPPRSQP 81
           ++G  FGVGDTI+C +DLE KPL++IGFSKNGK LG A  FD  S+G+GA  +  P+  P
Sbjct: 142 NFGDRFGVGDTIVCCIDLESKPLATIGFSKNGKWLGTAFQFDVGSLGLGALDSTFPKDSP 201

Query: 80  WESAFFPHVLLKNVVVQLQFNIEDGL 3
           W  A FPHVLLKNVVVQ+QF++E GL
Sbjct: 202 WGCALFPHVLLKNVVVQMQFSVEQGL 227


>ref|XP_004485702.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like isoform X1 [Cicer arietinum]
          Length = 716

 Score =  115 bits (287), Expect = 8e-24
 Identities = 53/86 (61%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGA-SAMPPRSQP 81
           ++G  FGVGDTI+C +DLE KPL++IGFSKNGK LG A  FD  S+G+GA  +  P+  P
Sbjct: 142 NFGDRFGVGDTIVCCIDLESKPLATIGFSKNGKWLGTAFQFDVGSLGLGALDSTFPKDSP 201

Query: 80  WESAFFPHVLLKNVVVQLQFNIEDGL 3
           W  A FPHVLLKNVVVQ+QF++E GL
Sbjct: 202 WGCALFPHVLLKNVVVQMQFSVEQGL 227


>ref|XP_006841811.1| hypothetical protein AMTR_s00003p00269470 [Amborella trichopoda]
           gi|548843832|gb|ERN03486.1| hypothetical protein
           AMTR_s00003p00269470 [Amborella trichopoda]
          Length = 711

 Score =  114 bits (285), Expect = 1e-23
 Identities = 55/85 (64%), Positives = 63/85 (74%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           D+G  FGVGDT++C VDLE KPL+S+GFS NGK LG+A  FDA   G+G      R   W
Sbjct: 144 DFGKKFGVGDTVVCAVDLESKPLASVGFSMNGKWLGIARLFDAGPKGLGVIMSSLRRIAW 203

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
            SA FPHVLLKNVVVQLQF+IEDGL
Sbjct: 204 GSALFPHVLLKNVVVQLQFSIEDGL 228


>ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Vitis vinifera]
          Length = 514

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 64/85 (75%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDTI+C V+LE KPL+SI FSKNGK LGVA  FDA   G+G    P R   W
Sbjct: 143 NYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAGVKGLGVVDSPMRQLHW 202

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNV+VQ+QF+ E+GL
Sbjct: 203 ESALFPHVLLKNVMVQVQFSTEEGL 227


>ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Vitis vinifera]
          Length = 590

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 64/85 (75%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDTI+C V+LE KPL+SI FSKNGK LGVA  FDA   G+G    P R   W
Sbjct: 290 NYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAGVKGLGVVDSPMRQLHW 349

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNV+VQ+QF+ E+GL
Sbjct: 350 ESALFPHVLLKNVMVQVQFSTEEGL 374


>emb|CBI23309.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 64/85 (75%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDTI+C V+LE KPL+SI FSKNGK LGVA  FDA   G+G    P R   W
Sbjct: 143 NYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAGVKGLGVVDSPMRQLHW 202

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNV+VQ+QF+ E+GL
Sbjct: 203 ESALFPHVLLKNVMVQVQFSTEEGL 227


>emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]
          Length = 1021

 Score =  114 bits (284), Expect = 2e-23
 Identities = 55/85 (64%), Positives = 64/85 (75%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDTI+C V+LE KPL+SI FSKNGK LGVA  FDA   G+G    P R   W
Sbjct: 310 NYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFDAGVKGLGVVDSPMRQLHW 369

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNV+VQ+QF+ E+GL
Sbjct: 370 ESALFPHVLLKNVMVQVQFSTEEGL 394


>ref|XP_004976964.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
           1-like [Setaria italica]
          Length = 699

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/85 (61%), Positives = 65/85 (76%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDTI+C VDL+ KP++SIGF++NG+ LG+A HFDA   G+G      R   W
Sbjct: 141 NYGVRFGVGDTIVCAVDLDSKPMASIGFARNGEWLGIAKHFDAGEKGLGLVDAAVRPMQW 200

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
           ESA FPHVLLKNVVV++QF+ EDGL
Sbjct: 201 ESALFPHVLLKNVVVEMQFSREDGL 225


>ref|XP_002448605.1| hypothetical protein SORBIDRAFT_06g029970 [Sorghum bicolor]
           gi|241939788|gb|EES12933.1| hypothetical protein
           SORBIDRAFT_06g029970 [Sorghum bicolor]
          Length = 682

 Score =  113 bits (283), Expect = 2e-23
 Identities = 51/85 (60%), Positives = 65/85 (76%)
 Frame = -3

Query: 257 DYGSSFGVGDTIICTVDLEKKPLSSIGFSKNGKSLGVAMHFDASSIGIGASAMPPRSQPW 78
           +YG  FGVGDT++C VDL+ KP++SIGF++NG+ LG+  HFDAS  G+G    P R   W
Sbjct: 144 NYGVKFGVGDTVVCAVDLDSKPMASIGFARNGEWLGIVRHFDASEKGLGLVDAPLRPMQW 203

Query: 77  ESAFFPHVLLKNVVVQLQFNIEDGL 3
            SA FPHVLLKNVVV++QF+ EDGL
Sbjct: 204 GSALFPHVLLKNVVVEMQFSREDGL 228


Top