BLASTX nr result

ID: Zingiber24_contig00046342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046342
         (526 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW77219.1| lectin [Musa acuminata AAA Group]                       77   2e-12
pdb|2BMY|A Chain A, Banana Lectin gi|71042657|pdb|2BMY|B Chain B...    77   3e-12
pdb|1X1V|A Chain A, Structure Of Banana Lectin- Methyl-Alpha-Man...    75   7e-12
gb|ABS86033.1| mannose-specific recombinant lectin [synthetic co...    75   9e-12
gb|ABS86034.1| mannose-binding lectin [Musa acuminata AAA Group]       65   9e-09
ref|XP_002449838.1| hypothetical protein SORBIDRAFT_05g024220 [S...    59   9e-07

>gb|ADW77219.1| lectin [Musa acuminata AAA Group]
          Length = 141

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/72 (51%), Positives = 50/72 (69%)
 Frame = +1

Query: 307 GAIKVGDWGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGN 486
           GAIKVG WG N G+ +DMGP ++I S+KI+SG VVD ++ T+      + T  +GG GG 
Sbjct: 3   GAIKVGAWGGNGGSAFDMGPAHRIISVKIYSGDVVDGVDVTFTSYEKTE-TRHFGGSGGT 61

Query: 487 PVQIDLKEGEYL 522
           P +I L+EGEYL
Sbjct: 62  PHEIVLQEGEYL 73


>pdb|2BMY|A Chain A, Banana Lectin gi|71042657|pdb|2BMY|B Chain B, Banana
           Lectin gi|71042658|pdb|2BMZ|A Chain A, Banana Lectin
           Bound To Xyl-b1,3 Man-a-o-methyl (xm)
           gi|71042659|pdb|2BMZ|B Chain B, Banana Lectin Bound To
           Xyl-b1,3 Man-a-o-methyl (xm) gi|71042660|pdb|2BN0|A
           Chain A, Banana Lectin Bound To Laminaribiose
           gi|71042661|pdb|2BN0|B Chain B, Banana Lectin Bound To
           Laminaribiose gi|6224973|gb|AAB82776.2|
           ripening-associated protein [Musa acuminata AAA Group]
          Length = 141

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 38/72 (52%), Positives = 48/72 (66%)
 Frame = +1

Query: 307 GAIKVGDWGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGN 486
           GAIKVG WG N G+ +DMGP  +I S+KI SG VVD ++ T+      + T  YGG GG 
Sbjct: 3   GAIKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDGVDVTFTYYGKTE-TRHYGGSGGT 61

Query: 487 PVQIDLKEGEYL 522
           P +I L+EGEYL
Sbjct: 62  PHEIVLQEGEYL 73


>pdb|1X1V|A Chain A, Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex
           gi|83753560|pdb|1X1V|B Chain B, Structure Of Banana
           Lectin- Methyl-Alpha-Mannose Complex
           gi|306440546|pdb|3MIT|A Chain A, Structure Of Banana
           Lectin-alpha-d-mannose Complex gi|306440547|pdb|3MIT|B
           Chain B, Structure Of Banana Lectin-alpha-d-mannose
           Complex gi|306440548|pdb|3MIU|A Chain A, Structure Of
           Banana Lectin-pentamannose Complex
           gi|306440549|pdb|3MIU|B Chain B, Structure Of Banana
           Lectin-pentamannose Complex gi|306440550|pdb|3MIV|A
           Chain A, Structure Of Banana Lectin - Glc-alpha(1,2)-glc
           Complex gi|306440551|pdb|3MIV|B Chain B, Structure Of
           Banana Lectin - Glc-alpha(1,2)-glc Complex
           gi|21392369|gb|AAM48480.1| lectin [Musa acuminata AAA
           Group]
          Length = 141

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = +1

Query: 307 GAIKVGDWGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGN 486
           GAIKVG WG N G+ +DMGP  +I S+KI SG VVD+++ T+      + T  +GG GG 
Sbjct: 3   GAIKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDAVDVTFTYYGKTE-TRHFGGSGGT 61

Query: 487 PVQIDLKEGEYL 522
           P +I L+EGEYL
Sbjct: 62  PHEIVLQEGEYL 73


>gb|ABS86033.1| mannose-specific recombinant lectin [synthetic construct]
          Length = 141

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 37/72 (51%), Positives = 48/72 (66%)
 Frame = +1

Query: 307 GAIKVGDWGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGN 486
           GAIKVG WG N G+ +DMGP  +I S+KI SG VVD ++ T+      + T  +GG GG 
Sbjct: 3   GAIKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDGVDVTFTYYGKTE-TRHFGGSGGT 61

Query: 487 PVQIDLKEGEYL 522
           P +I L+EGEYL
Sbjct: 62  PHEIVLQEGEYL 73


>gb|ABS86034.1| mannose-binding lectin [Musa acuminata AAA Group]
          Length = 132

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/65 (47%), Positives = 43/65 (66%)
 Frame = +1

Query: 328 WGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGNPVQIDLK 507
           WG N G+ +DMGP  +I S+KI SG VVD+++ T+      + T  +GG GG P +I L+
Sbjct: 1   WGGNGGSAFDMGPAYRIISVKIFSGDVVDAVDVTFTYYGKTE-TRHFGGSGGTPHEIVLQ 59

Query: 508 EGEYL 522
           EGEYL
Sbjct: 60  EGEYL 64


>ref|XP_002449838.1| hypothetical protein SORBIDRAFT_05g024220 [Sorghum bicolor]
           gi|241935681|gb|EES08826.1| hypothetical protein
           SORBIDRAFT_05g024220 [Sorghum bicolor]
          Length = 281

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
 Frame = +1

Query: 310 AIKVGDWGANVGNQWDMG-PVNKITSIKIHSGAVVDSIEFTYLMNASIQSTP-RYGGRGG 483
           A K+G WG N G+  D+  P  ++ SI I SG+VVDSI F+Y+  A  + T   +GG GG
Sbjct: 138 ATKIGAWGGNGGSAQDITEPPKRLESITISSGSVVDSIAFSYVDQAGQKHTAGPWGGPGG 197

Query: 484 NPVQIDLKEGEYL 522
           NP  I+L + E++
Sbjct: 198 NPKTIELSDSEFV 210


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