BLASTX nr result
ID: Zingiber24_contig00046342
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00046342 (526 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADW77219.1| lectin [Musa acuminata AAA Group] 77 2e-12 pdb|2BMY|A Chain A, Banana Lectin gi|71042657|pdb|2BMY|B Chain B... 77 3e-12 pdb|1X1V|A Chain A, Structure Of Banana Lectin- Methyl-Alpha-Man... 75 7e-12 gb|ABS86033.1| mannose-specific recombinant lectin [synthetic co... 75 9e-12 gb|ABS86034.1| mannose-binding lectin [Musa acuminata AAA Group] 65 9e-09 ref|XP_002449838.1| hypothetical protein SORBIDRAFT_05g024220 [S... 59 9e-07 >gb|ADW77219.1| lectin [Musa acuminata AAA Group] Length = 141 Score = 77.0 bits (188), Expect = 2e-12 Identities = 37/72 (51%), Positives = 50/72 (69%) Frame = +1 Query: 307 GAIKVGDWGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGN 486 GAIKVG WG N G+ +DMGP ++I S+KI+SG VVD ++ T+ + T +GG GG Sbjct: 3 GAIKVGAWGGNGGSAFDMGPAHRIISVKIYSGDVVDGVDVTFTSYEKTE-TRHFGGSGGT 61 Query: 487 PVQIDLKEGEYL 522 P +I L+EGEYL Sbjct: 62 PHEIVLQEGEYL 73 >pdb|2BMY|A Chain A, Banana Lectin gi|71042657|pdb|2BMY|B Chain B, Banana Lectin gi|71042658|pdb|2BMZ|A Chain A, Banana Lectin Bound To Xyl-b1,3 Man-a-o-methyl (xm) gi|71042659|pdb|2BMZ|B Chain B, Banana Lectin Bound To Xyl-b1,3 Man-a-o-methyl (xm) gi|71042660|pdb|2BN0|A Chain A, Banana Lectin Bound To Laminaribiose gi|71042661|pdb|2BN0|B Chain B, Banana Lectin Bound To Laminaribiose gi|6224973|gb|AAB82776.2| ripening-associated protein [Musa acuminata AAA Group] Length = 141 Score = 76.6 bits (187), Expect = 3e-12 Identities = 38/72 (52%), Positives = 48/72 (66%) Frame = +1 Query: 307 GAIKVGDWGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGN 486 GAIKVG WG N G+ +DMGP +I S+KI SG VVD ++ T+ + T YGG GG Sbjct: 3 GAIKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDGVDVTFTYYGKTE-TRHYGGSGGT 61 Query: 487 PVQIDLKEGEYL 522 P +I L+EGEYL Sbjct: 62 PHEIVLQEGEYL 73 >pdb|1X1V|A Chain A, Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex gi|83753560|pdb|1X1V|B Chain B, Structure Of Banana Lectin- Methyl-Alpha-Mannose Complex gi|306440546|pdb|3MIT|A Chain A, Structure Of Banana Lectin-alpha-d-mannose Complex gi|306440547|pdb|3MIT|B Chain B, Structure Of Banana Lectin-alpha-d-mannose Complex gi|306440548|pdb|3MIU|A Chain A, Structure Of Banana Lectin-pentamannose Complex gi|306440549|pdb|3MIU|B Chain B, Structure Of Banana Lectin-pentamannose Complex gi|306440550|pdb|3MIV|A Chain A, Structure Of Banana Lectin - Glc-alpha(1,2)-glc Complex gi|306440551|pdb|3MIV|B Chain B, Structure Of Banana Lectin - Glc-alpha(1,2)-glc Complex gi|21392369|gb|AAM48480.1| lectin [Musa acuminata AAA Group] Length = 141 Score = 75.5 bits (184), Expect = 7e-12 Identities = 37/72 (51%), Positives = 49/72 (68%) Frame = +1 Query: 307 GAIKVGDWGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGN 486 GAIKVG WG N G+ +DMGP +I S+KI SG VVD+++ T+ + T +GG GG Sbjct: 3 GAIKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDAVDVTFTYYGKTE-TRHFGGSGGT 61 Query: 487 PVQIDLKEGEYL 522 P +I L+EGEYL Sbjct: 62 PHEIVLQEGEYL 73 >gb|ABS86033.1| mannose-specific recombinant lectin [synthetic construct] Length = 141 Score = 75.1 bits (183), Expect = 9e-12 Identities = 37/72 (51%), Positives = 48/72 (66%) Frame = +1 Query: 307 GAIKVGDWGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGN 486 GAIKVG WG N G+ +DMGP +I S+KI SG VVD ++ T+ + T +GG GG Sbjct: 3 GAIKVGAWGGNGGSAFDMGPAYRIISVKIFSGDVVDGVDVTFTYYGKTE-TRHFGGSGGT 61 Query: 487 PVQIDLKEGEYL 522 P +I L+EGEYL Sbjct: 62 PHEIVLQEGEYL 73 >gb|ABS86034.1| mannose-binding lectin [Musa acuminata AAA Group] Length = 132 Score = 65.1 bits (157), Expect = 9e-09 Identities = 31/65 (47%), Positives = 43/65 (66%) Frame = +1 Query: 328 WGANVGNQWDMGPVNKITSIKIHSGAVVDSIEFTYLMNASIQSTPRYGGRGGNPVQIDLK 507 WG N G+ +DMGP +I S+KI SG VVD+++ T+ + T +GG GG P +I L+ Sbjct: 1 WGGNGGSAFDMGPAYRIISVKIFSGDVVDAVDVTFTYYGKTE-TRHFGGSGGTPHEIVLQ 59 Query: 508 EGEYL 522 EGEYL Sbjct: 60 EGEYL 64 >ref|XP_002449838.1| hypothetical protein SORBIDRAFT_05g024220 [Sorghum bicolor] gi|241935681|gb|EES08826.1| hypothetical protein SORBIDRAFT_05g024220 [Sorghum bicolor] Length = 281 Score = 58.5 bits (140), Expect = 9e-07 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%) Frame = +1 Query: 310 AIKVGDWGANVGNQWDMG-PVNKITSIKIHSGAVVDSIEFTYLMNASIQSTP-RYGGRGG 483 A K+G WG N G+ D+ P ++ SI I SG+VVDSI F+Y+ A + T +GG GG Sbjct: 138 ATKIGAWGGNGGSAQDITEPPKRLESITISSGSVVDSIAFSYVDQAGQKHTAGPWGGPGG 197 Query: 484 NPVQIDLKEGEYL 522 NP I+L + E++ Sbjct: 198 NPKTIELSDSEFV 210