BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046334
         (641 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]    210   2e-52
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     190   3e-46
gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]    185   1e-44
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   183   4e-44
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     183   4e-44
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   180   4e-43
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        178   1e-42
ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759...   177   2e-42
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   177   2e-42
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   172   6e-41
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     172   6e-41
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   172   7e-41
gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group]     172   1e-40
emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]        171   2e-40
ref|XP_006386829.1| hypothetical protein POPTR_0002s22700g [Popu...   170   3e-40
gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Jap...   169   5e-40
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   169   6e-40
ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, part...   168   1e-39
gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-...   166   5e-39
ref|XP_004959083.1| PREDICTED: uncharacterized protein LOC101763...   162   1e-37

>gb|EOY04065.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 289

 Score =  210 bits (535), Expect = 2e-52
 Identities = 107/197 (54%), Positives = 144/197 (73%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           ++L L SILD NKL GPNFLD FRNL+IVLK EK +Y+ +  +P     DA  +   A+Q
Sbjct: 3   NNLLLRSILDANKLIGPNFLDSFRNLKIVLKQEKKSYIFDTSIPPVPTTDANVEDKEAHQ 62

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           +H  D + A+C+MLASM+ ELQKQ EHMD  +++ HLRELF+++ R ER+++SK LF  K
Sbjct: 63  RHKDDDDQAACVMLASMTLELQKQDEHMDVQSMILHLRELFDKEGRTERYEISKELFRCK 122

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           M EGSS    VLKM G IERL  LG AM HELSI L+L SL +S+SQFV+N+ +N++E+T
Sbjct: 123 MAEGSSVKPHVLKMIGPIERLGQLGLAMYHELSINLVLQSLPDSFSQFVLNFHMNRLEAT 182

Query: 580 IPELINMLKIVELSVKK 630
           +P+L+NML   E S++K
Sbjct: 183 LPKLLNMLDTAEKSIRK 199


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  190 bits (482), Expect = 3e-46
 Identities = 98/197 (49%), Positives = 131/197 (66%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           S+ NL SIL+  KL G NF+DW+RNLRIVLK E+  YVLE P P  L ++AT+     ++
Sbjct: 8   STFNLRSILEKEKLNGTNFMDWYRNLRIVLKQERKEYVLEVPYPEELPNNATATARRGFE 67

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           KH  D+   SC+MLA+MSPELQKQ+E  DA+T +  LR +F  QAR ERF  SK LF  +
Sbjct: 68  KHTNDALDISCLMLATMSPELQKQYESSDAHTTIQGLRGMFENQARDERFNTSKSLFACR 127

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+KM GYIE L  LGF +  EL+  +IL SL  S+  F++NY +N ++ T
Sbjct: 128 LVEGNPVSPHVIKMIGYIESLEKLGFPLSQELATDVILQSLPPSFEPFILNYHMNNMDRT 187

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK VE S++K
Sbjct: 188 LAELHGMLKTVEESIQK 204


>gb|EOY19271.1| Retrotransposon protein, putative [Theobroma cacao]
          Length = 277

 Score =  185 bits (469), Expect = 1e-44
 Identities = 91/168 (54%), Positives = 126/168 (75%)
 Frame = +1

Query: 130 KVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMIDSELASCIMLASMSPELQKQHEHMDA 309
           K EK +YV++ P+P     DA+++   AYQ H  D + A+C+MLASM+ ELQKQHEHMD 
Sbjct: 21  KEEKKSYVIDTPIPPVPVADASAEDKEAYQCHKDDDDQAACMMLASMTLELQKQHEHMDV 80

Query: 310 YTIVYHLRELFNEQARIERFKVSKLLFGSKMQEGSSAVQFVLKMNGYIERLRSLGFAMDH 489
            +++ HLRELF+ + RIER+++SK LF  KM EGSS    VLKM G IERLR LG AMDH
Sbjct: 81  QSMILHLRELFDREGRIERYEISKELFRCKMAEGSSVRPHVLKMIGLIERLRQLGLAMDH 140

Query: 490 ELSIGLILHSLSNSYSQFVMNYRINQIESTIPELINMLKIVELSVKKE 633
           ELSI L+L SL +S+SQF++N+ +N++E+T+PEL+NML   + S++K+
Sbjct: 141 ELSIDLVLQSLPDSFSQFMLNFHMNRLEATLPELLNMLDTAKRSIRKD 188


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  183 bits (464), Expect = 4e-44
 Identities = 95/197 (48%), Positives = 129/197 (65%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           S+ NL SIL+  KLTG NF+DW+RNLRIVL+ E   +VL  P P +L ++A + Q   ++
Sbjct: 74  SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHE 133

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           K   D    SC+MLA+MSPELQ+Q+E +DA+TI+  LR +F +QAR ERF  SK LF  +
Sbjct: 134 KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 193

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+KM GY E L  LGF +  EL+  LIL SL  S+  F+MN+ +N +  T
Sbjct: 194 LAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 253

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E S+KK
Sbjct: 254 LAELHGMLKTAEESIKK 270


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  183 bits (464), Expect = 4e-44
 Identities = 95/197 (48%), Positives = 129/197 (65%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           S+ NL SIL+  KLTG NF+DW+RNLRIVL+ E   +VL  P P +L ++A + Q   ++
Sbjct: 7   SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHE 66

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           K   D    SC+MLA+MSPELQ+Q+E +DA+TI+  LR +F +QAR ERF  SK LF  +
Sbjct: 67  KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 126

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+KM GY E L  LGF +  EL+  LIL SL  S+  F+MN+ +N +  T
Sbjct: 127 LAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 186

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E S+KK
Sbjct: 187 LAELHGMLKTAEESIKK 203


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  180 bits (456), Expect = 4e-43
 Identities = 94/197 (47%), Positives = 128/197 (64%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           SS NL SIL+  KLTG NF+DW+RNLRIVL+ E   +VL    P +L ++A + Q   ++
Sbjct: 86  SSFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTESFPANLPNNALAAQRREHE 145

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           K   D    SC+MLA+MSPELQ+Q+E +DA+TI+  LR +F +QAR ERF  SK LF  +
Sbjct: 146 KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 205

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+K+ GY E L  LGF +  EL+  LIL SL  S+  F+MN+ +N +  T
Sbjct: 206 LAEGNPVSPHVIKIIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 265

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E S+KK
Sbjct: 266 LAELHGMLKTAEESIKK 282


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  178 bits (452), Expect = 1e-42
 Identities = 92/197 (46%), Positives = 127/197 (64%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           S+ NL SIL+  KLTG NF+DW+RNLRIVL+ E   ++L  P P  L ++A + Q   ++
Sbjct: 84  SNFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFLLIQPFPADLPNNAPAAQRRKHE 143

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           +   D    SC+MLA+MSPELQ Q+E +DA+TI+  LR +F +QAR ERF  SK LF  +
Sbjct: 144 RRCNDYLDISCLMLATMSPELQSQYEALDAHTIITGLRNMFEDQARAERFNTSKFLFAYR 203

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + +G+     V+KM GY E L  LGF +  EL+  LIL SL  S+  F+MN+ +N +  T
Sbjct: 204 LAQGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 263

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E S+KK
Sbjct: 264 LAELHGMLKTAEESIKK 280


>ref|XP_004977683.1| PREDICTED: uncharacterized protein LOC101759138 [Setaria italica]
          Length = 272

 Score =  177 bits (450), Expect = 2e-42
 Identities = 92/192 (47%), Positives = 127/192 (66%)
 Frame = +1

Query: 61  ILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMIDSE 240
           +L+  KL G NF+DW+ NLRIV + EK  YVLE P P     DA +    AYQKH  D+ 
Sbjct: 1   MLEKEKLNGTNFIDWYCNLRIVFRQEKTEYVLEQPYPDDPLVDANAAARRAYQKHCDDA- 59

Query: 241 LASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSKMQEGSSA 420
             +C+MLA+M  +LQKQ+EH+DA+T++  LR +F  Q R ER+ +SK LF  K+ EGSS 
Sbjct: 60  -LNCLMLATMFLDLQKQYEHVDAHTMIEGLRGIFENQVRAERYNISKSLFACKLAEGSSV 118

Query: 421 VQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIESTIPELINM 600
             +V+K+ GYIE L  LGF +   L+I +IL  L+ SY  F++NY++N +E T+ EL  M
Sbjct: 119 SPYVIKIIGYIETLDKLGFELKDHLAIDIILQLLTMSYKPFILNYQMNGMEKTLLELHGM 178

Query: 601 LKIVELSVKKEP 636
           LKI + S+KK P
Sbjct: 179 LKIAKESIKKNP 190


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  177 bits (449), Expect = 2e-42
 Identities = 92/197 (46%), Positives = 127/197 (64%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           SS NL SIL+  KLTG N +DW+RNLRIVL+ E   +VL  P P  L ++A + Q   ++
Sbjct: 7   SSFNLRSILEKEKLTGTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 66

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           K   D    SC+MLA+MSPELQ+Q+E +DA+TI+  LR +F +QAR +RF  SK LF  +
Sbjct: 67  KRCNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAKRFNTSKSLFACR 126

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+KM GY E L  LGF +  EL+  LIL SL  S+  F++N+ +N +  T
Sbjct: 127 LAEGNPVSPHVIKMIGYNETLEKLGFPLSQELATDLILQSLPPSFEPFILNFNMNNMNRT 186

Query: 580 IPELINMLKIVELSVKK 630
           + +L  MLK  E S+KK
Sbjct: 187 LTKLPGMLKTAEESIKK 203


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1073

 Score =  172 bits (437), Expect = 6e-41
 Identities = 90/197 (45%), Positives = 125/197 (63%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           S+ NL  IL+  KLT  N +DW+RNLRIVL+ E   +VL  P P  L ++A + Q   ++
Sbjct: 99  SNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 158

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           +   +    SC+MLA+MSPELQ+Q+E +DA+TI+  LR +F +QAR ERF  SK LF  +
Sbjct: 159 RRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 218

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+KM GY E L  LGF +  EL+  LIL SL  S+  F+MN+ +N +  T
Sbjct: 219 LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 278

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E S+KK
Sbjct: 279 LAELHGMLKTAEESIKK 295


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  172 bits (437), Expect = 6e-41
 Identities = 90/197 (45%), Positives = 125/197 (63%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           S+ NL  IL+  KLT  N +DW+RNLRIVL+ E   +VL  P P  L ++A + Q   ++
Sbjct: 99  SNFNLRYILEKEKLTRTNIMDWYRNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHE 158

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           +   +    SC+MLA+MSPELQ+Q+E +DA+TI+  LR +F +QAR ERF  SK LF  +
Sbjct: 159 RRCKEYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 218

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+KM GY E L  LGF +  EL+  LIL SL  S+  F+MN+ +N +  T
Sbjct: 219 LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 278

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E S+KK
Sbjct: 279 LAELHGMLKTAEESIKK 295


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  172 bits (436), Expect = 7e-41
 Identities = 92/197 (46%), Positives = 127/197 (64%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           SS  L SIL+  KL G NF DW RNLRIVL+ +K  +VLE P+P    ++A +    AY+
Sbjct: 11  SSFALRSILEKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPTENAAAAIKTAYK 70

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           K   +S   SC+MLA+M+ +LQKQ E+++AY ++  L+ +F  QAR ERF++SK LFG K
Sbjct: 71  KACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTERFEISKNLFGCK 130

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG      V+KM GY + L  LGF +  EL+  LIL SL  SY QF++N+ +N ++  
Sbjct: 131 LAEGGPVSPHVIKMVGYTQSLEKLGFPLSQELATDLILASLPESYGQFILNFHMNGLDKN 190

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E SVKK
Sbjct: 191 LTELHMMLKTAEGSVKK 207


>gb|AAO73268.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 478

 Score =  172 bits (435), Expect = 1e-40
 Identities = 90/197 (45%), Positives = 124/197 (62%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           S+ NL SIL+  KLTG NFLDW+ NLRIVL+ E   +VL  P P  L ++A + Q   ++
Sbjct: 7   SNFNLWSILEKEKLTGTNFLDWYHNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQCREHE 66

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           +   +    SC+MLA+MSPELQ+Q+E ++ +TI+  LR +F +QAR ERF  SK LF  +
Sbjct: 67  RRCNEYLDISCLMLATMSPELQRQYEALNDHTIITGLRNMFEDQARAERFNTSKFLFACR 126

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+KM GY E L  LGF +  EL+  LIL SL   +  F+MN+ IN +   
Sbjct: 127 LAEGNPVSLHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPRFEPFIMNFNINNLNRI 186

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E S+KK
Sbjct: 187 LAELHGMLKTAEESIKK 203


>emb|CAD40471.2| OSJNBa0067G20.17 [Oryza sativa Japonica Group]
          Length = 276

 Score =  171 bits (432), Expect = 2e-40
 Identities = 91/197 (46%), Positives = 128/197 (64%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           SS NL SIL+  KL G NF+DW+RNLRIVL+ E   +VLE P PT L ++AT+ +   ++
Sbjct: 9   SSFNLRSILEKEKLNGTNFVDWYRNLRIVLRQEHKEFVLEEPFPTDLPNNATAARRREHE 68

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           K   +    SC+ML ++SPE Q+Q++ +DA+TI+  L  +F  QAR ERF  SK LF  +
Sbjct: 69  KRCNEYLDISCLMLVTISPEFQRQYQTLDAHTIITRLCNMFEYQARAERFNTSKSLFACR 128

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG++    V+KM GY E L  LGF +  EL+I LIL SL  S+  F+MN+ +++   T
Sbjct: 129 LAEGNAVSPNVIKMIGYTESLEKLGFPLSKELAIDLILQSLPPSFKPFIMNFNMDR---T 185

Query: 580 IPELINMLKIVELSVKK 630
           + EL  MLK  E S+KK
Sbjct: 186 LAELHGMLKTAEESIKK 202


>ref|XP_006386829.1| hypothetical protein POPTR_0002s22700g [Populus trichocarpa]
           gi|550345621|gb|ERP64626.1| hypothetical protein
           POPTR_0002s22700g [Populus trichocarpa]
          Length = 171

 Score =  170 bits (431), Expect = 3e-40
 Identities = 80/164 (48%), Positives = 120/164 (73%)
 Frame = +1

Query: 115 LRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMIDSELASCIMLASMSPELQKQH 294
           +RI++K EK  Y+LE P+  +  +D   +    +++H+ D E  +C+MLA +S ++Q+QH
Sbjct: 1   MRIIIKQEKRMYILENPILNAPFEDVGEEFRNEHERHVDDDEQTACVMLAIISYKIQRQH 60

Query: 295 EHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSKMQEGSSAVQFVLKMNGYIERLRSLG 474
           E+M+AYTI+ HL+ELF+E +R  R++ SK LF  KM +GSS    VLKMNGYIE+L  LG
Sbjct: 61  ENMNAYTIIMHLKELFDETSRTNRYQTSKELFRCKMTKGSSMNTHVLKMNGYIEKLEQLG 120

Query: 475 FAMDHELSIGLILHSLSNSYSQFVMNYRINQIESTIPELINMLK 606
           F MD +LS+ L+L SL  ++SQF+MNY +N+++ST+PEL NML+
Sbjct: 121 FVMDRKLSVELVLQSLPQNFSQFIMNYHMNKLDSTLPELFNMLR 164


>gb|AAK52165.1|AC084831_19 putative polyprotein [Oryza sativa Japonica Group]
           gi|108709282|gb|ABF97077.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 262

 Score =  169 bits (429), Expect = 5e-40
 Identities = 90/198 (45%), Positives = 124/198 (62%)
 Frame = +1

Query: 37  MSSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAY 216
           +SS NL SIL+  +LTG NF+DW+ NL IVL+ E   +VL  P P  L ++A   Q   +
Sbjct: 6   LSSFNLRSILEKEELTGTNFMDWYCNLGIVLRQEHKEFVLTQPFPADLPNNAPVAQRSEH 65

Query: 217 QKHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGS 396
           +K   D    SC+MLA+MSPE Q+Q+E +DA+TI+  LR +F +QAR ERF   K LF  
Sbjct: 66  EKRCNDYLDISCLMLATMSPEFQRQYEALDAHTIITGLRNMFEDQARAERFNTLKSLFAC 125

Query: 397 KMQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIES 576
           ++ EG+     V+KM GY E L  LG  +  EL+  LIL SL  S+  F+MN+ +N + S
Sbjct: 126 RLAEGNPVSLHVIKMIGYTESLDKLGCPLSRELATDLILQSLPPSFEPFIMNFNMNNLNS 185

Query: 577 TIPELINMLKIVELSVKK 630
           ++ EL  MLK  E S+KK
Sbjct: 186 SLAELHGMLKTAEESIKK 203


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  169 bits (428), Expect = 6e-40
 Identities = 92/209 (44%), Positives = 132/209 (63%)
 Frame = +1

Query: 4   HRLNQPVKRIRMSSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLA 183
           H +  P+  +  SS  L SIL   KL G NF DW RNLRIVL+ +K  +VLE P+P   A
Sbjct: 83  HCIMAPIA-VPTSSFALRSILKKEKLNGTNFADWSRNLRIVLRQDKKEHVLEEPIPDVPA 141

Query: 184 DDATSDQLLAYQKHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIE 363
           D+A +    AY+K   +S   SC+MLA+M+ +LQKQ E+++AY ++  L+ +F  QAR +
Sbjct: 142 DNAAATLKSAYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMIVALKGMFETQARTK 201

Query: 364 RFKVSKLLFGSKMQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQF 543
           RF++SK LF  K+ EGS     ++KM GY + L  LGF +  EL+  LIL SL  SY QF
Sbjct: 202 RFEISKNLFSCKLAEGSPVSPHMIKMVGYTQSLEKLGFPLSQELATDLILASLPASYGQF 261

Query: 544 VMNYRINQIESTIPELINMLKIVELSVKK 630
           ++N+ +N ++  + EL  +LK  E S+KK
Sbjct: 262 ILNFHMNGLDKNLTELHMLLKTAEDSIKK 290


>ref|XP_006436321.1| hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
           gi|557538517|gb|ESR49561.1| hypothetical protein
           CICLE_v10033628mg, partial [Citrus clementina]
          Length = 263

 Score =  168 bits (426), Expect = 1e-39
 Identities = 90/193 (46%), Positives = 128/193 (66%)
 Frame = +1

Query: 52  LHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMI 231
           L  IL+  +LTGPN++DWFRNLRI+L  EKI+YVL+ P P  + +  +  + + YQK   
Sbjct: 9   LARILENYRLTGPNYVDWFRNLRIILNYEKISYVLDTPKPNEIPEGTSEAERVTYQKWQD 68

Query: 232 DSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSKMQEG 411
           D   A   +LASMS ELQ+QHE+M           L++EQ+R  R+++SK LF  +M EG
Sbjct: 69  DDLSAKSYILASMSNELQRQHENMP---------NLYSEQSRTVRYEISKKLFRMRMTEG 119

Query: 412 SSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIESTIPEL 591
            S  + VLKM  YIE+L +L F+MD EL+I LIL SL +S+SQF+MN+ +N++E ++ EL
Sbjct: 120 -SVNEHVLKMIDYIEQLEALNFSMDGELAIDLILQSLPDSFSQFIMNFNMNKMECSLAEL 178

Query: 592 INMLKIVELSVKK 630
           + ML   E  +KK
Sbjct: 179 LKMLNTAETCIKK 191


>gb|AAX96621.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550176|gb|ABA92973.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 591

 Score =  166 bits (420), Expect = 5e-39
 Identities = 88/197 (44%), Positives = 124/197 (62%)
 Frame = +1

Query: 40  SSLNLHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQ 219
           S+ NL SIL+  KLTG NF+DW+ NLRIVL+ E   +VL  P    L ++A + Q   ++
Sbjct: 29  SNFNLRSILEKEKLTGTNFMDWYHNLRIVLRQEHKEFVLTQPFLADLPNNAPATQRREHE 88

Query: 220 KHMIDSELASCIMLASMSPELQKQHEHMDAYTIVYHLRELFNEQARIERFKVSKLLFGSK 399
           +   +    SC+MLA+MS +LQ+Q+E +DA+TI+  LR +F +QAR ERF  SK LF  +
Sbjct: 89  RRCNEYLDISCLMLATMSLKLQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSLFACR 148

Query: 400 MQEGSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIEST 579
           + EG+     V+KM GY E L  LGF +  EL+  LIL SL  S+  F+MN+ +N +  T
Sbjct: 149 LAEGNPVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 208

Query: 580 IPELINMLKIVELSVKK 630
           + EL   LK  E S+KK
Sbjct: 209 LAELHVTLKTAEESIKK 225


>ref|XP_004959083.1| PREDICTED: uncharacterized protein LOC101763468, partial [Setaria
           italica]
          Length = 423

 Score =  162 bits (409), Expect = 1e-37
 Identities = 89/194 (45%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
 Frame = +1

Query: 52  LHSILDTNKLTGPNFLDWFRNLRIVLKVEKIAYVLEGPLPTSLADDATSDQLLAYQKHMI 231
           L S+L+ +KL G N+ DW RNLRIVL+ EK   VL+ PLP   ADDA +    AY+K   
Sbjct: 3   LRSVLEKDKLNGTNYSDWIRNLRIVLRAEKKEDVLDNPLPEEPADDAPAAAKTAYKKACD 62

Query: 232 DSELASCIMLASMSPELQKQHE-HMDAYTIVYHLRELFNEQARIERFKVSKLLFGSKMQE 408
            +   SC+MLA M PELQ Q E + +A+ ++  LR++F  QAR ERF VSK    SK+ E
Sbjct: 63  ANLEVSCLMLACMEPELQMQFETNHEAHDMIVALRDMFQTQARTERFNVSKAFVESKLAE 122

Query: 409 GSSAVQFVLKMNGYIERLRSLGFAMDHELSIGLILHSLSNSYSQFVMNYRINQIESTIPE 588
           G++    V+KM GY +RL  LGF +  EL+   IL SL  SY +F+ NY ++  E  + E
Sbjct: 123 GAAVGPHVIKMVGYTQRLEKLGFPLGQELATDFILSSLPPSYGKFISNYHMHWTEKGLNE 182

Query: 589 LINMLKIVELSVKK 630
           L  MLK  E  +KK
Sbjct: 183 LCGMLKTAEADIKK 196