BLASTX nr result
ID: Zingiber24_contig00046296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046296
(305 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308874.2| transcription elongation factor-related fami... 75 9e-12
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu... 75 1e-11
ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu... 75 1e-11
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera... 73 3e-11
ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr... 73 3e-11
gb|EOY08735.1| Transcription elongation factor family protein, p... 70 3e-10
gb|EOY08734.1| Transcription elongation factor family protein, p... 70 3e-10
gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis] 70 4e-10
gb|AFK48326.1| unknown [Medicago truncatula] 70 4e-10
ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago ... 70 4e-10
ref|XP_003624929.1| hypothetical protein MTR_7g089140 [Medicago ... 70 4e-10
ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago ... 70 4e-10
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm... 69 6e-10
ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymera... 68 1e-09
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera... 67 2e-09
ref|XP_004493377.1| PREDICTED: probable mediator of RNA polymera... 66 4e-09
ref|XP_004493376.1| PREDICTED: probable mediator of RNA polymera... 66 4e-09
ref|XP_004493371.1| PREDICTED: probable mediator of RNA polymera... 66 4e-09
gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus pe... 66 4e-09
ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymera... 65 7e-09
>ref|XP_002308874.2| transcription elongation factor-related family protein [Populus
trichocarpa] gi|550335369|gb|EEE92397.2| transcription
elongation factor-related family protein [Populus
trichocarpa]
Length = 483
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/73 (52%), Positives = 51/73 (69%)
Frame = +1
Query: 85 RTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKR 264
+T+++VL IKDIL + QD+SD V TVD L+ T+IGKAVNVL KH SK+
Sbjct: 168 QTVDEVLRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNVLRKHGSKQ 227
Query: 265 IRHLSRSLIDGWK 303
IR+L+R+LI+ WK
Sbjct: 228 IRYLARTLIEDWK 240
>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
gi|550320725|gb|EEF04988.2| hypothetical protein
POPTR_0016s03310g [Populus trichocarpa]
Length = 480
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 85 RTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKR 264
+T+++VL IKDIL + QD+SD V TVD L+ T+IGKAVN L KH SK+
Sbjct: 162 QTVDEVLRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQ 221
Query: 265 IRHLSRSLIDGWK 303
IRHL+R+LI+ WK
Sbjct: 222 IRHLARTLIEDWK 234
>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
gi|222867860|gb|EEF04991.1| hypothetical protein
POPTR_0016s03310g [Populus trichocarpa]
Length = 474
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/73 (52%), Positives = 50/73 (68%)
Frame = +1
Query: 85 RTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKR 264
+T+++VL IKDIL + QD+SD V TVD L+ T+IGKAVN L KH SK+
Sbjct: 162 QTVDEVLRIKDILYNSQDESDSVLLESLRKLRLMALTVDTLKATEIGKAVNGLRKHGSKQ 221
Query: 265 IRHLSRSLIDGWK 303
IRHL+R+LI+ WK
Sbjct: 222 IRHLARTLIEDWK 234
>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Citrus sinensis]
Length = 448
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +1
Query: 4 DLEFSNRAVSNCT--DXXXXXXXXXXXXDRTLEQVLWIKDILSDHQDQSDDVXXXXXXXX 177
D SN+ VSN + D + + +VL IK+IL + +D+SD V
Sbjct: 105 DDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRL 164
Query: 178 XXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHLSRSLIDGWK 303
TVD L+ T+IGKAVN L KH SK+IRHL+R+LI+GWK
Sbjct: 165 QLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK 206
>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
gi|557532580|gb|ESR43763.1| hypothetical protein
CICLE_v10011717mg [Citrus clementina]
Length = 448
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +1
Query: 4 DLEFSNRAVSNCT--DXXXXXXXXXXXXDRTLEQVLWIKDILSDHQDQSDDVXXXXXXXX 177
D SN+ VSN + D + + +VL IK+IL + +D+SD V
Sbjct: 105 DDHVSNQIVSNFSSGDIAEALTDEIEEESQVVGEVLRIKEILHNSRDESDSVLFESLRRL 164
Query: 178 XXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHLSRSLIDGWK 303
TVD L+ T+IGKAVN L KH SK+IRHL+R+LI+GWK
Sbjct: 165 QLMALTVDTLKATEIGKAVNGLRKHGSKQIRHLARTLIEGWK 206
>gb|EOY08735.1| Transcription elongation factor family protein, putative isoform 2
[Theobroma cacao]
Length = 324
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+V IK+IL + QD+SD V TVD+L+ T IGKAVN + KH+SK+IRHL
Sbjct: 5 EVYRIKEILHNSQDESDSVLFDSLRRLQLMALTVDILKATGIGKAVNRVRKHSSKQIRHL 64
Query: 277 SRSLIDGWK 303
+++LIDGWK
Sbjct: 65 AQTLIDGWK 73
>gb|EOY08734.1| Transcription elongation factor family protein, putative isoform 1
[Theobroma cacao]
Length = 464
Score = 70.1 bits (170), Expect = 3e-10
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+V IK+IL + QD+SD V TVD+L+ T IGKAVN + KH+SK+IRHL
Sbjct: 145 EVYRIKEILHNSQDESDSVLFDSLRRLQLMALTVDILKATGIGKAVNRVRKHSSKQIRHL 204
Query: 277 SRSLIDGWK 303
+++LIDGWK
Sbjct: 205 AQTLIDGWK 213
>gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]
Length = 464
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+VL IK+IL + +++S+ V TVD L++T+IGKAVN KH SK IRHL
Sbjct: 153 EVLRIKEILQNREEESESVLFGELRRLQFMALTVDTLKETEIGKAVNRFRKHGSKEIRHL 212
Query: 277 SRSLIDGWK 303
+R+LIDGWK
Sbjct: 213 ARTLIDGWK 221
>gb|AFK48326.1| unknown [Medicago truncatula]
Length = 451
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+V IK+IL++H+D+SD V VD+L+ T+IGKAVN L KH SK IR L
Sbjct: 135 EVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQL 194
Query: 277 SRSLIDGWK 303
+R+LIDGWK
Sbjct: 195 ARTLIDGWK 203
>ref|XP_003624930.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499945|gb|AES81148.1| hypothetical protein
MTR_7g089140 [Medicago truncatula]
Length = 444
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+V IK+IL++H+D+SD V VD+L+ T+IGKAVN L KH SK IR L
Sbjct: 132 EVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQL 191
Query: 277 SRSLIDGWK 303
+R+LIDGWK
Sbjct: 192 ARTLIDGWK 200
>ref|XP_003624929.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499944|gb|AES81147.1| hypothetical protein
MTR_7g089140 [Medicago truncatula]
Length = 467
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+V IK+IL++H+D+SD V VD+L+ T+IGKAVN L KH SK IR L
Sbjct: 135 EVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQL 194
Query: 277 SRSLIDGWK 303
+R+LIDGWK
Sbjct: 195 ARTLIDGWK 203
>ref|XP_003624928.1| hypothetical protein MTR_7g089140 [Medicago truncatula]
gi|355499943|gb|AES81146.1| hypothetical protein
MTR_7g089140 [Medicago truncatula]
Length = 447
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+V IK+IL++H+D+SD V VD+L+ T+IGKAVN L KH SK IR L
Sbjct: 135 EVTRIKEILNNHEDESDSVLFESLRRLQLMQLCVDLLKSTEIGKAVNHLRKHGSKDIRQL 194
Query: 277 SRSLIDGWK 303
+R+LIDGWK
Sbjct: 195 ARTLIDGWK 203
>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
gi|223543547|gb|EEF45077.1| conserved hypothetical
protein [Ricinus communis]
Length = 473
Score = 68.9 bits (167), Expect = 6e-10
Identities = 36/69 (52%), Positives = 45/69 (65%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+VL IKDIL +D+S+ V TVD L+ T+IGKAVN L KH S++IRHL
Sbjct: 162 EVLRIKDILLHSRDESESVLFESLRRLQLMALTVDTLKATEIGKAVNGLRKHGSQQIRHL 221
Query: 277 SRSLIDGWK 303
+R LIDGWK
Sbjct: 222 ARVLIDGWK 230
>ref|XP_006604318.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
gi|571556809|ref|XP_006604319.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Glycine max]
Length = 458
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +1
Query: 85 RTLEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKR 264
R + ++L I+D+L + +D+S+ V TVD L+ T+IGKAVN L KH SK
Sbjct: 139 RYVAEILRIRDVLLNPEDESEAVLFDSLRRLQLMELTVDCLKATEIGKAVNPLRKHGSKD 198
Query: 265 IRHLSRSLIDGWK 303
IR LSR+LIDGWK
Sbjct: 199 IRQLSRTLIDGWK 211
>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like [Cucumis sativus]
Length = 452
Score = 67.0 bits (162), Expect = 2e-09
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+VL IK+IL++ +D+SD V +VD L+ T+IGKAVN L KH SKRIRHL
Sbjct: 143 EVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL 202
Query: 277 SRSLIDGWK 303
+R LI WK
Sbjct: 203 ARVLIMEWK 211
>ref|XP_004493377.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X7 [Cicer arietinum]
Length = 445
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+VL I+DIL++ ++SD V +VD+L+ T+IGK VN L KH SK +R L
Sbjct: 130 EVLRIRDILNNRDEESDSVLFESLRRLELMELSVDLLKATEIGKVVNPLRKHGSKEVRQL 189
Query: 277 SRSLIDGWK 303
+R+LIDGWK
Sbjct: 190 ARTLIDGWK 198
>ref|XP_004493376.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X6 [Cicer arietinum]
Length = 441
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+VL I+DIL++ ++SD V +VD+L+ T+IGK VN L KH SK +R L
Sbjct: 130 EVLRIRDILNNRDEESDSVLFESLRRLELMELSVDLLKATEIGKVVNPLRKHGSKEVRQL 189
Query: 277 SRSLIDGWK 303
+R+LIDGWK
Sbjct: 190 ARTLIDGWK 198
>ref|XP_004493371.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Cicer arietinum]
gi|502108027|ref|XP_004493372.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Cicer arietinum]
gi|502108031|ref|XP_004493373.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X3 [Cicer arietinum]
gi|502108035|ref|XP_004493374.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X4 [Cicer arietinum]
gi|502108039|ref|XP_004493375.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X5 [Cicer arietinum]
Length = 451
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/69 (46%), Positives = 45/69 (65%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+VL I+DIL++ ++SD V +VD+L+ T+IGK VN L KH SK +R L
Sbjct: 130 EVLRIRDILNNRDEESDSVLFESLRRLELMELSVDLLKATEIGKVVNPLRKHGSKEVRQL 189
Query: 277 SRSLIDGWK 303
+R+LIDGWK
Sbjct: 190 ARTLIDGWK 198
>gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus persica]
Length = 444
Score = 66.2 bits (160), Expect = 4e-09
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +1
Query: 97 QVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIRHL 276
+V IK+I ++ +++SD V V+ L+ T+IGKAVN L KH SK+IRHL
Sbjct: 144 EVFRIKEIFNNCEEESDTVLFESLRKLQLMALNVETLKATEIGKAVNGLRKHGSKKIRHL 203
Query: 277 SRSLIDGWK 303
+RSLIDGWK
Sbjct: 204 ARSLIDGWK 212
>ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b-like isoform X1 [Glycine max]
gi|571440343|ref|XP_006575125.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26b-like isoform X2 [Glycine max]
Length = 453
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +1
Query: 91 LEQVLWIKDILSDHQDQSDDVXXXXXXXXXXXXXTVDVLEKTKIGKAVNVLHKHNSKRIR 270
+E+V IKDI +++++SD V TVD+L+ T+IGKAVN L KH S+ I
Sbjct: 143 VEEVFRIKDIFLNYEEESDSVLFDSLRRLQLMELTVDLLKATEIGKAVNPLRKHGSRDIC 202
Query: 271 HLSRSLIDGWK 303
L+R+LIDGWK
Sbjct: 203 QLARTLIDGWK 213