BLASTX nr result
ID: Zingiber24_contig00046284
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046284
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536... 99 6e-19
ref|XP_004291337.1| PREDICTED: SKP1-like protein 1B-like [Fragar... 97 3e-18
gb|EOX90784.1| S phase kinase-associated protein 1 [Theobroma ca... 96 5e-18
gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium] gi|462422921|g... 95 1e-17
gb|AGF33287.1| SKP1 1A-like protein, partial [Quercus ilex] 94 1e-17
gb|ESW28184.1| hypothetical protein PHAVU_003G265900g [Phaseolus... 94 1e-17
gb|AGV54260.1| SKP1-like protein [Phaseolus vulgaris] gi|5610312... 94 2e-17
ref|XP_002270061.1| PREDICTED: SKP1-like protein 1B isoform 2 [V... 94 2e-17
gb|EXB60668.1| SKP1-like protein 1B [Morus notabilis] 94 2e-17
ref|XP_003592198.1| SKP1-like protein [Medicago truncatula] gi|3... 94 2e-17
ref|XP_002305525.2| E3 ubiquitin ligase SCF complex subunit SKP1... 94 2e-17
ref|XP_006847969.1| hypothetical protein AMTR_s00029p00153350 [A... 93 3e-17
ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512... 93 3e-17
ref|XP_002301954.1| hypothetical protein POPTR_0002s02020g [Popu... 93 3e-17
ref|XP_004287783.1| PREDICTED: SKP1-like protein 1A-like [Fragar... 93 4e-17
ref|XP_004512164.1| PREDICTED: SKP1-like protein 1A-like [Cicer ... 92 5e-17
gb|AAD34458.1| Skp1 [Medicago sativa] 92 5e-17
ref|XP_003612227.1| SKP1-like protein [Medicago truncatula] gi|1... 92 5e-17
gb|AFK44762.1| unknown [Lotus japonicus] 92 7e-17
ref|NP_001241052.1| uncharacterized protein LOC100798104 [Glycin... 92 7e-17
>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
protein [Gossypium hirsutum]
Length = 156
Score = 99.0 bits (245), Expect = 6e-19
Identities = 52/72 (72%), Positives = 58/72 (80%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHV+A D R AD+ELKSWDA FVKV++ATLF L LAA+YL IKGLLDLT QTVA
Sbjct: 60 YCKKHVEAPKT-DDRSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVA 118
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 119 DMIKGKTPEEIR 130
>ref|XP_004291337.1| PREDICTED: SKP1-like protein 1B-like [Fragaria vesca subsp. vesca]
Length = 159
Score = 96.7 bits (239), Expect = 3e-18
Identities = 51/75 (68%), Positives = 58/75 (77%), Gaps = 3/75 (4%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLA---DEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQ 87
YCKKHVDA+ D R + DEELK+WDA FVKV++ATLF L LAA+YL IK LLDLT Q
Sbjct: 59 YCKKHVDAAPKSDDRSSSSGDEELKNWDADFVKVDQATLFDLILAANYLNIKNLLDLTCQ 118
Query: 86 TVADKMKGMTLEEIR 42
TVAD +KG T EEIR
Sbjct: 119 TVADMIKGKTPEEIR 133
>gb|EOX90784.1| S phase kinase-associated protein 1 [Theobroma cacao]
Length = 156
Score = 95.9 bits (237), Expect = 5e-18
Identities = 50/72 (69%), Positives = 58/72 (80%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHV+A D R A++ELK+WDA FVKV++ATLF L LAA+YL IKGLLDLT QTVA
Sbjct: 60 YCKKHVEAPKTED-RTAEDELKNWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVA 118
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 119 DMIKGKTPEEIR 130
>gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium] gi|462422921|gb|EMJ27184.1|
hypothetical protein PRUPE_ppa012755mg [Prunus persica]
Length = 156
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/72 (65%), Positives = 55/72 (76%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHVDA+ D DE+LK+WD FVK+++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 59 YCKKHVDAAKPDDRPSNDEDLKAWDTDFVKIDQATLFDLILAANYLNIKSLLDLTCQTVA 118
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 119 DMIKGKTPEEIR 130
>gb|AGF33287.1| SKP1 1A-like protein, partial [Quercus ilex]
Length = 124
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/72 (65%), Positives = 59/72 (81%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHV+++S D R +DE+LK+WD +FV+V++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 43 YCKKHVESTS-ADERTSDEDLKAWDTEFVRVDQATLFDLILAANYLNIKSLLDLTCQTVA 101
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 102 DMIKGKTPEEIR 113
>gb|ESW28184.1| hypothetical protein PHAVU_003G265900g [Phaseolus vulgaris]
Length = 155
Score = 94.4 bits (233), Expect = 1e-17
Identities = 48/72 (66%), Positives = 59/72 (81%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHV+A+S D + ++ELK+WDA+FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 59 YCKKHVEANS-ADEKPTEDELKAWDAEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVA 117
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 118 DMIKGKTPEEIR 129
>gb|AGV54260.1| SKP1-like protein [Phaseolus vulgaris] gi|561031299|gb|ESW29878.1|
hypothetical protein PHAVU_002G106100g [Phaseolus
vulgaris]
Length = 155
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/72 (66%), Positives = 59/72 (81%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHVDA++ D + ++E+LK+WDA FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 59 YCKKHVDAANP-DDKPSEEDLKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 117
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 118 DMIKGKTPEEIR 129
>ref|XP_002270061.1| PREDICTED: SKP1-like protein 1B isoform 2 [Vitis vinifera]
gi|147788379|emb|CAN76662.1| hypothetical protein
VITISV_040452 [Vitis vinifera]
Length = 156
Score = 94.0 bits (232), Expect = 2e-17
Identities = 48/72 (66%), Positives = 55/72 (76%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHV+A + DEELK+WDA FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 59 YCKKHVEAPKPEERSGVDEELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 118
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 119 DMIKGKTPEEIR 130
>gb|EXB60668.1| SKP1-like protein 1B [Morus notabilis]
Length = 157
Score = 93.6 bits (231), Expect = 2e-17
Identities = 49/73 (67%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Frame = -3
Query: 257 YCKKHVDA-SSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTV 81
YCKKHV+A SD + AD++LK+WDA FVKV++ATLF L LAA+YL IK LLDLT QTV
Sbjct: 59 YCKKHVEAPKSDDRASSADDDLKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTV 118
Query: 80 ADKMKGMTLEEIR 42
AD +KG T EEIR
Sbjct: 119 ADMIKGKTPEEIR 131
>ref|XP_003592198.1| SKP1-like protein [Medicago truncatula] gi|355481246|gb|AES62449.1|
SKP1-like protein [Medicago truncatula]
Length = 103
Score = 93.6 bits (231), Expect = 2e-17
Identities = 47/73 (64%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Frame = -3
Query: 257 YCKKHVDASS-DGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTV 81
YCKKHVDA++ D + ++++LK+WDA+FVKV++ATLF L LAA+YL IKGLLDLT Q V
Sbjct: 5 YCKKHVDATAASSDEKPSEDDLKNWDAEFVKVDQATLFDLILAANYLDIKGLLDLTCQIV 64
Query: 80 ADKMKGMTLEEIR 42
AD +KG T EEIR
Sbjct: 65 ADMIKGKTPEEIR 77
>ref|XP_002305525.2| E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
[Populus trichocarpa] gi|118481770|gb|ABK92824.1|
unknown [Populus trichocarpa]
gi|550341306|gb|EEE86036.2| E3 ubiquitin ligase SCF
complex subunit SKP1/ASK1 family protein [Populus
trichocarpa]
Length = 161
Score = 93.6 bits (231), Expect = 2e-17
Identities = 49/77 (63%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLA-----DEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLT 93
YCKKHV+A SD + + DE LKSWD +FVKV++ TLF L LAA+YL IKGLLDLT
Sbjct: 59 YCKKHVEAGSDKEKNVTGVTEKDESLKSWDTEFVKVDQNTLFDLILAANYLNIKGLLDLT 118
Query: 92 YQTVADKMKGMTLEEIR 42
QTVAD +KG T EEIR
Sbjct: 119 CQTVADMIKGKTPEEIR 135
>ref|XP_006847969.1| hypothetical protein AMTR_s00029p00153350 [Amborella trichopoda]
gi|548851274|gb|ERN09550.1| hypothetical protein
AMTR_s00029p00153350 [Amborella trichopoda]
Length = 157
Score = 93.2 bits (230), Expect = 3e-17
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCK HVDA + + +EE+KSWDA+FV+V++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 60 YCKYHVDAQKVTEDKTQEEEIKSWDAEFVRVDQATLFDLILAANYLNIKNLLDLTCQTVA 119
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 120 DMIKGKTPEEIR 131
>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
putative [Ricinus communis]
Length = 157
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = -3
Query: 257 YCKKHVDAS-SDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTV 81
YCKKHV+ S SD D+ELK+WDA+FVKV++ATLF L LAA+YL IK LLDLT QTV
Sbjct: 59 YCKKHVETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTV 118
Query: 80 ADKMKGMTLEEIR 42
AD +KG T EEIR
Sbjct: 119 ADMIKGKTPEEIR 131
>ref|XP_002301954.1| hypothetical protein POPTR_0002s02020g [Populus trichocarpa]
gi|118485200|gb|ABK94461.1| unknown [Populus
trichocarpa] gi|222843680|gb|EEE81227.1| hypothetical
protein POPTR_0002s02020g [Populus trichocarpa]
Length = 157
Score = 93.2 bits (230), Expect = 3e-17
Identities = 49/73 (67%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = -3
Query: 257 YCKKHVDA-SSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTV 81
YCKKHV+ SD AD++LKSWDA+FVKV++ATLF L LAA+YL IK LLDLT QTV
Sbjct: 59 YCKKHVETPKSDDRPSSADDDLKSWDAEFVKVDQATLFDLILAANYLNIKNLLDLTCQTV 118
Query: 80 ADKMKGMTLEEIR 42
AD +KG T EEIR
Sbjct: 119 ADMIKGKTPEEIR 131
>ref|XP_004287783.1| PREDICTED: SKP1-like protein 1A-like [Fragaria vesca subsp. vesca]
Length = 156
Score = 92.8 bits (229), Expect = 4e-17
Identities = 48/72 (66%), Positives = 56/72 (77%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHVDA+ D ++ +EELK WD FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 60 YCKKHVDAAKP-DEKVTEEELKVWDQDFVKVDQATLFDLILAANYLNIKNLLDLTCQTVA 118
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 119 DMIKGKTPEEIR 130
>ref|XP_004512164.1| PREDICTED: SKP1-like protein 1A-like [Cicer arietinum]
Length = 155
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/72 (65%), Positives = 58/72 (80%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHV+A+S D + +++LK+WDA FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 59 YCKKHVEAASS-DDKPTEDDLKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 117
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 118 DMIKGKTPEEIR 129
>gb|AAD34458.1| Skp1 [Medicago sativa]
Length = 153
Score = 92.4 bits (228), Expect = 5e-17
Identities = 48/72 (66%), Positives = 59/72 (81%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHVDA++ D + ++ELKSWD++FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 57 YCKKHVDAAAAED-KPNEDELKSWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 115
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 116 DMIKGKTPEEIR 127
>ref|XP_003612227.1| SKP1-like protein [Medicago truncatula] gi|109255190|gb|ABG27020.1|
SKP1-like b [Medicago truncatula]
gi|217071548|gb|ACJ84134.1| unknown [Medicago
truncatula] gi|217075170|gb|ACJ85945.1| unknown
[Medicago truncatula] gi|355513562|gb|AES95185.1|
SKP1-like protein [Medicago truncatula]
gi|388502012|gb|AFK39072.1| unknown [Medicago
truncatula]
Length = 155
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/72 (65%), Positives = 59/72 (81%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHVDA++ + + ++ELKSWD++FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 59 YCKKHVDAAA-AEEKPNEDELKSWDSEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVA 117
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 118 DMIKGKTPEEIR 129
>gb|AFK44762.1| unknown [Lotus japonicus]
Length = 155
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/72 (65%), Positives = 58/72 (80%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHV+A++ D + ++ELK+WDA FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 59 YCKKHVEAANP-DEKPTEDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 117
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 118 DMIKGKTPEEIR 129
>ref|NP_001241052.1| uncharacterized protein LOC100798104 [Glycine max]
gi|255641709|gb|ACU21125.1| unknown [Glycine max]
Length = 155
Score = 92.0 bits (227), Expect = 7e-17
Identities = 47/72 (65%), Positives = 58/72 (80%)
Frame = -3
Query: 257 YCKKHVDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVA 78
YCKKHV+A+ D + +++ELK+WDA FVKV++ATLF L LAA+YL IK LLDLT QTVA
Sbjct: 59 YCKKHVEANC-ADEKPSEDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 117
Query: 77 DKMKGMTLEEIR 42
D +KG T EEIR
Sbjct: 118 DMIKGKTPEEIR 129