BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046269
         (597 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...   125   7e-27
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   125   9e-27
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...   124   2e-26
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   124   2e-26
sp|Q8L6J2.1|RPO2A_TOBAC RecName: Full=DNA-directed RNA polymeras...   124   2e-26
ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   123   3e-26
ref|XP_006585822.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   123   4e-26
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   123   4e-26
ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   123   4e-26
ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   123   4e-26
ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   123   4e-26
ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   123   4e-26
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              123   4e-26
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   123   4e-26
emb|CAN71736.1| hypothetical protein VITISV_011556 [Vitis vinifera]   123   4e-26
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   122   6e-26
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ...   122   7e-26
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...   122   7e-26
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   122   7e-26
emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA p...   122   7e-26

>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
            RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score =  125 bits (315), Expect = 7e-27
 Identities = 59/81 (72%), Positives = 66/81 (81%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +C+ AGL+FAGVHDSYWTHACDVDK+NRILRE+FV LY  PILEKLLE F+TS       
Sbjct: 941  ACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFP 1000

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL+ VLESPYFFN
Sbjct: 1001 PLPERGDFDLRDVLESPYFFN 1021


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  125 bits (314), Expect = 9e-27
 Identities = 58/81 (71%), Positives = 66/81 (81%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +C+ AGL+FAGVHDSYWTHACDVDK+NRILRE+FV LY  PILEKLLEGF+ S       
Sbjct: 942  ACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFP 1001

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL+ V+ESPYFFN
Sbjct: 1002 PLPERGDFDLRDVIESPYFFN 1022


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  124 bits (311), Expect = 2e-26
 Identities = 58/81 (71%), Positives = 66/81 (81%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +C+ AGL+FAGVHDSYWTHACDVDK+NRILRE+FV LY  PILEKLLE F+TS       
Sbjct: 940  ACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFP 999

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFD++ VLESPYFFN
Sbjct: 1000 PLPERGDFDMRDVLESPYFFN 1020


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  124 bits (311), Expect = 2e-26
 Identities = 58/81 (71%), Positives = 66/81 (81%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +C+ AGL+FAGVHDSYWTHACDVDK+NRILRE+FV LY  PILEKLLE F+TS       
Sbjct: 940  ACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFP 999

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFD++ VLESPYFFN
Sbjct: 1000 PLPERGDFDMRDVLESPYFFN 1020


>sp|Q8L6J2.1|RPO2A_TOBAC RecName: Full=DNA-directed RNA polymerase 2A; AltName:
           Full=NictaRpoT2-syl; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2A
           gi|21425675|emb|CAC95025.1| mitochondrial and plastid
           RNA polymerase [Nicotiana tabacum]
          Length = 332

 Score =  124 bits (311), Expect = 2e-26
 Identities = 58/81 (71%), Positives = 66/81 (81%)
 Frame = -2

Query: 596 SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
           +C+ AGL+FAGVHDSYWTHACDVDK+NRILRE+FV LY  PILEKLLE F+TS       
Sbjct: 252 ACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFP 311

Query: 416 XXPERGDFDLKQVLESPYFFN 354
             PERGDFD++ VLESPYFFN
Sbjct: 312 PLPERGDFDMRDVLESPYFFN 332


>ref|XP_006602976.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
          Length = 1046

 Score =  123 bits (309), Expect = 3e-26
 Identities = 58/81 (71%), Positives = 64/81 (79%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CK  GL FAGVHDSYWTHACDVDKMNRILRE+FV LY  P+LE LLE F++S       
Sbjct: 966  ACKKEGLSFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFP 1025

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDLK+VLESPYFFN
Sbjct: 1026 SLPERGDFDLKEVLESPYFFN 1046


>ref|XP_006585822.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X2 [Glycine max]
          Length = 998

 Score =  123 bits (308), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CK  GL+FAGVHDSYWTHACDVDKMNRILRE+FV LY  P+LE LLE F++S       
Sbjct: 918  ACKKEGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFP 977

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 978  SLPERGDFDLREVLESPYFFN 998


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  123 bits (308), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +C+ AGL+FAGVHDSYWTHACDVDK+NRILRE+FV LY  PILEKLLE F+ S       
Sbjct: 939  ACRRAGLNFAGVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQVSYPTLSFP 998

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL+ V+ESPYFFN
Sbjct: 999  PLPERGDFDLRDVIESPYFFN 1019


>ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like isoform X3 [Cicer
            arietinum]
          Length = 1053

 Score =  123 bits (308), Expect = 4e-26
 Identities = 58/81 (71%), Positives = 64/81 (79%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CKNAGL FAGVHDSYWTHACDVD MN+ILRE+FV LY  PILE LLE F+ S       
Sbjct: 973  ACKNAGLSFAGVHDSYWTHACDVDNMNKILREKFVELYETPILENLLESFQESFPSLQFP 1032

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 1033 PLPERGDFDLREVLESPYFFN 1053


>ref|XP_004491958.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like isoform X2 [Cicer
            arietinum]
          Length = 1090

 Score =  123 bits (308), Expect = 4e-26
 Identities = 58/81 (71%), Positives = 64/81 (79%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CKNAGL FAGVHDSYWTHACDVD MN+ILRE+FV LY  PILE LLE F+ S       
Sbjct: 1010 ACKNAGLSFAGVHDSYWTHACDVDNMNKILREKFVELYETPILENLLESFQESFPSLQFP 1069

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 1070 PLPERGDFDLREVLESPYFFN 1090


>ref|XP_004491957.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like isoform X1 [Cicer
            arietinum]
          Length = 1126

 Score =  123 bits (308), Expect = 4e-26
 Identities = 58/81 (71%), Positives = 64/81 (79%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CKNAGL FAGVHDSYWTHACDVD MN+ILRE+FV LY  PILE LLE F+ S       
Sbjct: 1046 ACKNAGLSFAGVHDSYWTHACDVDNMNKILREKFVELYETPILENLLESFQESFPSLQFP 1105

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 1106 PLPERGDFDLREVLESPYFFN 1126


>ref|XP_003530460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Glycine max]
          Length = 1015

 Score =  123 bits (308), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CK  GL+FAGVHDSYWTHACDVDKMNRILRE+FV LY  P+LE LLE F++S       
Sbjct: 935  ACKKEGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQSSFPSLSFP 994

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 995  SLPERGDFDLREVLESPYFFN 1015


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  123 bits (308), Expect = 4e-26
 Identities = 58/81 (71%), Positives = 66/81 (81%)
 Frame = -2

Query: 596 SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
           +C+ AGL+FAGVHDSYWTHACDVD+MNRILRE+FV LY  PILE LLEGF+ S       
Sbjct: 730 ACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFP 789

Query: 416 XXPERGDFDLKQVLESPYFFN 354
             PERGDFDL++VLESPYFFN
Sbjct: 790 PLPERGDFDLREVLESPYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  123 bits (308), Expect = 4e-26
 Identities = 58/81 (71%), Positives = 66/81 (81%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +C+ AGL+FAGVHDSYWTHACDVD+MNRILRE+FV LY  PILE LLEGF+ S       
Sbjct: 898  ACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFP 957

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 958  PLPERGDFDLREVLESPYFFN 978


>emb|CAN71736.1| hypothetical protein VITISV_011556 [Vitis vinifera]
          Length = 168

 Score =  123 bits (308), Expect = 4e-26
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = -2

Query: 596 SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
           +CK AGL+FAGVHDSYWTHACDVD+MNRILRE+FV LY  PILE LLE F+ S       
Sbjct: 88  ACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVQLYETPILENLLESFQQSFPALEFP 147

Query: 416 XXPERGDFDLKQVLESPYFFN 354
             PERGDFDL++VLESPYFFN
Sbjct: 148 PLPERGDFDLREVLESPYFFN 168


>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
            DNA-directed RNA polymerase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 997

 Score =  122 bits (307), Expect = 6e-26
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CK+AGL+FAGVHDSYWTHACDVD+MNRILRE FV LY  PILE LLEGF+ S       
Sbjct: 917  ACKHAGLNFAGVHDSYWTHACDVDEMNRILRENFVELYEAPILENLLEGFQKSFPKLKFP 976

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              P+RGDFDL+ VLESPYFFN
Sbjct: 977  PLPDRGDFDLRDVLESPYFFN 997


>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 996

 Score =  122 bits (306), Expect = 7e-26
 Identities = 58/81 (71%), Positives = 65/81 (80%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CK AGL+FAGVHDSYWTHACDVD+MNRILRE+FV LY  PILE LLE F+ S       
Sbjct: 916  ACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFP 975

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 976  PLPERGDFDLREVLESPYFFN 996


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score =  122 bits (306), Expect = 7e-26
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CK AGL+FAGVHDSYWTHACD+D+MNRILRE+FV LY  PILE LLEGF+ S       
Sbjct: 926  ACKKAGLNFAGVHDSYWTHACDIDEMNRILREKFVELYEAPILENLLEGFQQSFPTLTFP 985

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              P+RGDFDL+ VLESPYFFN
Sbjct: 986  PLPDRGDFDLRDVLESPYFFN 1006


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  122 bits (306), Expect = 7e-26
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CK AGL+FAGVHDSYWTHACDVD+MNR+LRE+FV LY  PILE LLE F+ S       
Sbjct: 955  ACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFP 1014

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 1015 PLPERGDFDLREVLESPYFFN 1035


>emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA polymerase
            [Chenopodium album]
          Length = 988

 Score =  122 bits (306), Expect = 7e-26
 Identities = 57/81 (70%), Positives = 65/81 (80%)
 Frame = -2

Query: 596  SCKNAGLHFAGVHDSYWTHACDVDKMNRILREEFVALYNNPILEKLLEGFKTSXXXXXXX 417
            +CK AG++FAGVHDSYWTHACDVDKMN+ILRE+FV LY  PILE LLE F+ S       
Sbjct: 908  ACKKAGMNFAGVHDSYWTHACDVDKMNQILREKFVELYEQPILENLLESFQESFPTLQFP 967

Query: 416  XXPERGDFDLKQVLESPYFFN 354
              PERGDFDL++VLESPYFFN
Sbjct: 968  PLPERGDFDLREVLESPYFFN 988