BLASTX nr result

ID: Zingiber24_contig00046248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046248
         (672 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877924.1| hypothetical protein ARALYDRAFT_906742 [Arab...    58   2e-06

>ref|XP_002877924.1| hypothetical protein ARALYDRAFT_906742 [Arabidopsis lyrata subsp.
           lyrata] gi|297323762|gb|EFH54183.1| hypothetical protein
           ARALYDRAFT_906742 [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
 Frame = -1

Query: 432 ASVIPAPPEGHYSFKKQLNETCTASGFGRNISFLAEEHSLDNRIKKSPCKKTSEVLIKDL 253
           +S +P   +G     ++L  + ++S F   +S    E+  D           + V +K L
Sbjct: 17  SSQVPTSHQGKKQKSQKLKSSRSSSEFNSCLSEALSENKQDFH---------TGVPMKSL 67

Query: 252 IEEELSKGKETKHSSPSLIAKLMGLDSCPSLV----KQKRNTNIPGLF--GNYVDAEDLL 91
           + +E+SK KE+K  SPS+IA+LMGLD  PS      +QK   +  G    G+  D    L
Sbjct: 68  LAQEMSKHKESKKRSPSIIARLMGLDVLPSQSSPHRQQKSMESQQGRSGGGSSYDGNKSL 127

Query: 90  EWKHKDSHELKEVFEISNA 34
            W+ K   + K+VFE+ +A
Sbjct: 128 GWRSKGEQKFKDVFEVLDA 146


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