BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046204
         (325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004983935.1| PREDICTED: putative pentatricopeptide repeat...   113   2e-23
gb|AAO37943.1| hypothetical protein [Oryza sativa Japonica Group]     111   9e-23
gb|EEE60303.1| hypothetical protein OsJ_13371 [Oryza sativa Japo...   111   9e-23
gb|EEC76535.1| hypothetical protein OsI_14327 [Oryza sativa Indi...   111   9e-23
ref|NP_001051899.1| Os03g0849700 [Oryza sativa Japonica Group] g...   111   9e-23
gb|ABF99910.1| pentatricopeptide, putative, expressed [Oryza sat...   111   9e-23
ref|XP_002436450.1| hypothetical protein SORBIDRAFT_10g002910 [S...   110   2e-22
ref|XP_006650216.1| PREDICTED: putative pentatricopeptide repeat...   108   7e-22
ref|XP_003579039.1| PREDICTED: putative pentatricopeptide repeat...   103   3e-20
emb|CBI19925.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat...   102   4e-20
emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]   102   4e-20
gb|EMT12971.1| hypothetical protein F775_10400 [Aegilops tauschii]    102   7e-20
ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containi...   101   9e-20
ref|XP_006434327.1| hypothetical protein CICLE_v10000495mg [Citr...   100   2e-19
ref|XP_002520265.1| pentatricopeptide repeat-containing protein,...   100   3e-19
ref|XP_002302206.2| pentatricopeptide repeat-containing family p...    94   2e-17
gb|EXB42572.1| Putative pentatricopeptide repeat-containing prot...    92   6e-17
ref|XP_004237912.1| PREDICTED: putative pentatricopeptide repeat...    92   6e-17
ref|XP_006364856.1| PREDICTED: putative pentatricopeptide repeat...    89   8e-16

>ref|XP_004983935.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like isoform X1 [Setaria
           italica] gi|514818464|ref|XP_004983936.1| PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like isoform X2 [Setaria
           italica] gi|514818466|ref|XP_004983937.1| PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like isoform X3 [Setaria
           italica]
          Length = 685

 Score =  113 bits (283), Expect = 2e-23
 Identities = 53/103 (51%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCG-SDKFVLAT 139
           A  LL+EMPV D VACNAVLH Y+R G+  EAF+L K++  + N   +S   +D FVL T
Sbjct: 120 AHDLLDEMPVKDAVACNAVLHRYVRCGRVDEAFSLLKRIGRQCNAEVISSPWNDPFVLTT 179

Query: 138 LLSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           ++ ACA+ + YD+GRQ H+RIV+ ++++DSVLG +L++MY KC
Sbjct: 180 VVGACADRMKYDFGRQAHARIVVAKIEIDSVLGCSLIDMYCKC 222


>gb|AAO37943.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 731

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/102 (53%), Positives = 71/102 (69%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR LL EMPV D VACNAVLH Y+RRG+  EAF L + V       + S  +D FVLAT+
Sbjct: 56  ARSLLIEMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATI 115

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + ACA+ + YD+GRQ H+R+V+ +++ D VL  ALVNMY KC
Sbjct: 116 VGACADWMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKC 157


>gb|EEE60303.1| hypothetical protein OsJ_13371 [Oryza sativa Japonica Group]
          Length = 797

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/102 (53%), Positives = 71/102 (69%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR LL EMPV D VACNAVLH Y+RRG+  EAF L + V       + S  +D FVLAT+
Sbjct: 122 ARSLLIEMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATI 181

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + ACA+ + YD+GRQ H+R+V+ +++ D VL  ALVNMY KC
Sbjct: 182 VGACADWMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKC 223


>gb|EEC76535.1| hypothetical protein OsI_14327 [Oryza sativa Indica Group]
          Length = 797

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/102 (53%), Positives = 71/102 (69%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR LL EMPV D VACNAVLH Y+RRG+  EAF L + V       + S  +D FVLAT+
Sbjct: 122 ARSLLIEMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATI 181

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + ACA+ + YD+GRQ H+R+V+ +++ D VL  ALVNMY KC
Sbjct: 182 VGACADWMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKC 223


>ref|NP_001051899.1| Os03g0849700 [Oryza sativa Japonica Group]
           gi|113550370|dbj|BAF13813.1| Os03g0849700 [Oryza sativa
           Japonica Group]
          Length = 724

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/102 (53%), Positives = 71/102 (69%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR LL EMPV D VACNAVLH Y+RRG+  EAF L + V       + S  +D FVLAT+
Sbjct: 122 ARSLLIEMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATI 181

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + ACA+ + YD+GRQ H+R+V+ +++ D VL  ALVNMY KC
Sbjct: 182 VGACADWMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKC 223


>gb|ABF99910.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group] gi|215767226|dbj|BAG99454.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 684

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/102 (53%), Positives = 71/102 (69%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR LL EMPV D VACNAVLH Y+RRG+  EAF L + V       + S  +D FVLAT+
Sbjct: 122 ARSLLIEMPVKDPVACNAVLHRYVRRGRADEAFALLRTVGQCSGADASSPWNDPFVLATI 181

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + ACA+ + YD+GRQ H+R+V+ +++ D VL  ALVNMY KC
Sbjct: 182 VGACADWMKYDFGRQAHARMVVSKIEQDLVLSCALVNMYCKC 223


>ref|XP_002436450.1| hypothetical protein SORBIDRAFT_10g002910 [Sorghum bicolor]
           gi|241914673|gb|EER87817.1| hypothetical protein
           SORBIDRAFT_10g002910 [Sorghum bicolor]
          Length = 686

 Score =  110 bits (276), Expect = 2e-22
 Identities = 52/102 (50%), Positives = 73/102 (71%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR LLEEMPV D VAC+AVLH ++R G+  EAF L K++ S  N   +   SD FVL T+
Sbjct: 122 ARDLLEEMPVKDAVACHAVLHRFVRCGRVDEAFALLKRIGSHCNPDVIPPWSDPFVLTTV 181

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + ACA+ + Y+ GRQ+H+R+V+ + ++DSVL  AL++MY KC
Sbjct: 182 VGACADRMKYEIGRQVHARLVVAKTEIDSVLACALIDMYCKC 223


>ref|XP_006650216.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like isoform X1 [Oryza
           brachyantha] gi|573925337|ref|XP_006650217.1| PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like isoform X2 [Oryza
           brachyantha] gi|573925339|ref|XP_006650218.1| PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like isoform X3 [Oryza
           brachyantha]
          Length = 685

 Score =  108 bits (270), Expect = 7e-22
 Identities = 54/103 (52%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELN-TMSLSCGSDKFVLAT 139
           AR LL +MP+ D VACNAVLH Y+R G+  EAF+L +KVS   N   + S  +D FVLAT
Sbjct: 122 ARSLLIQMPIKDAVACNAVLHRYVRCGRVDEAFDLIRKVSLHCNGAEATSPWNDPFVLAT 181

Query: 138 LLSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           ++ ACA+ + Y++GRQ H+R+V+ +++LD VL  ALV+MY KC
Sbjct: 182 VVGACADRMKYNFGRQAHARMVVSRIELDLVLSCALVDMYCKC 224


>ref|XP_003579039.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Brachypodium distachyon]
          Length = 698

 Score =  103 bits (256), Expect = 3e-20
 Identities = 54/106 (50%), Positives = 71/106 (66%), Gaps = 4/106 (3%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTM----SLSCGSDKFV 148
           AR LL EMPV D VACN VLH Y+R G+  EAF L + + S   ++    S S  +D FV
Sbjct: 127 ARALLHEMPVKDPVACNTVLHRYVRCGRVDEAFALVRAIGSGNGSVPAPSSSSPCNDPFV 186

Query: 147 LATLLSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           LAT++ ACA+   YD+G Q H+R+V+ + +LDSVL  ALV+MY KC
Sbjct: 187 LATVVGACADRTRYDFGTQAHARMVVAKTELDSVLSCALVDMYCKC 232


>emb|CBI19925.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  102 bits (255), Expect = 4e-20
 Identities = 53/102 (51%), Positives = 71/102 (69%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           ARRL  EMP  + +A N+++H Y   G+P+EA  LFK +S  LN +   CG D FVLAT+
Sbjct: 159 ARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS--LNPLERFCG-DTFVLATV 215

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + AC    A D G+QIH+RIV+ +V+ DSVLGS+LVN+Y KC
Sbjct: 216 VGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKC 257


>ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Vitis vinifera]
          Length = 685

 Score =  102 bits (255), Expect = 4e-20
 Identities = 53/102 (51%), Positives = 71/102 (69%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           ARRL  EMP  + +A N+++H Y   G+P+EA  LFK +S  LN +   CG D FVLAT+
Sbjct: 123 ARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS--LNPLERFCG-DTFVLATV 179

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + AC    A D G+QIH+RIV+ +V+ DSVLGS+LVN+Y KC
Sbjct: 180 VGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKC 221



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/102 (32%), Positives = 58/102 (56%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR++ + MP    ++ N+++  + +   P EA +LF     E+N + L    DKF LA +
Sbjct: 390 ARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLF----CEMNKLGLRM--DKFSLAGV 443

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           +SACA   + + G QI +R  I  ++ D ++ ++LV+ Y KC
Sbjct: 444 ISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKC 485


>emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
          Length = 1796

 Score =  102 bits (255), Expect = 4e-20
 Identities = 53/102 (51%), Positives = 71/102 (69%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           ARRL  EMP  + +A N+++H Y   G+P+EA  LFK +S  LN +   CG D FVLAT+
Sbjct: 123 ARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS--LNPLERFCG-DTFVLATV 179

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + AC    A D G+QIH+RIV+ +V+ DSVLGS+LVN+Y KC
Sbjct: 180 VGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKC 221



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/102 (32%), Positives = 58/102 (56%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR++ + MP    ++ N+++  + +   P EA +LF     E+N + L    DKF LA +
Sbjct: 390 ARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLF----CEMNKLGLRM--DKFSLAGV 443

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           +SACA   + + G QI +R  I  ++ D ++ ++LV+ Y KC
Sbjct: 444 ISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKC 485



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/99 (35%), Positives = 54/99 (54%)
 Frame = -2

Query: 309  RLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATLLS 130
            R+ EE+   D V CNA++ +Y   G  + A  LF      + T+  +    +F L+ +LS
Sbjct: 997  RVFEEIYQWDSVLCNAMISSYAWHGFGENALQLF------VLTLRENLRPTEFTLSIVLS 1050

Query: 129  ACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAK 13
            A +  L  D G QIHS +V   ++ D ++ S+LV MYAK
Sbjct: 1051 AVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAK 1089


>gb|EMT12971.1| hypothetical protein F775_10400 [Aegilops tauschii]
          Length = 688

 Score =  102 bits (253), Expect = 7e-20
 Identities = 52/103 (50%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCG-SDKFVLAT 139
           A  LL+EMPV D VA NAV+H Y+R G+  EAF LF+++ S     + S   +D FVLAT
Sbjct: 122 AHSLLDEMPVKDAVAVNAVMHRYVRCGRVDEAFALFREIGSACGGAADSSPCNDLFVLAT 181

Query: 138 LLSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           ++ ACA+ +  D+GRQ+H R+V  +++LDSVL  ALV+MY KC
Sbjct: 182 VVGACADRMKRDFGRQVHGRMVTAKIELDSVLSCALVDMYCKC 224


>ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
            chloroplastic-like [Citrus sinensis]
          Length = 1390

 Score =  101 bits (252), Expect = 9e-20
 Identities = 50/105 (47%), Positives = 73/105 (69%)
 Frame = -2

Query: 315  ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
            AR L  +MP  + +A N+++H Y+R G  +EA  LFK+++S+L    L C  D F+LAT+
Sbjct: 831  ARTLFNDMPRRNAIAWNSMIHCYVRNGFAREAVRLFKELNSDL-VERLQC--DAFILATV 887

Query: 135  LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKCESF 1
            + ACA+  A +YG+QIHS I++  +D DSVLGS+LVN+Y KC  F
Sbjct: 888  IGACADLAALEYGKQIHSHILVNGLDFDSVLGSSLVNLYGKCGDF 932



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/102 (31%), Positives = 55/102 (53%)
 Frame = -2

Query: 315  ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
            A+ +   MP    ++ N+++    + G P EA +LF       N   L    DKF LA++
Sbjct: 1098 AKHIFRTMPNKSLISWNSMIVGLSQNGSPIEALDLF------CNMNKLDLRMDKFSLASV 1151

Query: 135  LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
            +SACA   + + G Q+ +R+ I  +D D ++ ++LV+ Y KC
Sbjct: 1152 ISACANISSLELGEQVFARVTIIGLDSDQIISTSLVDFYCKC 1193



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/91 (37%), Positives = 48/91 (52%)
 Frame = -2

Query: 282 DDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATLLSACAECLAYD 103
           D V+ NAVL  Y RRGQ +EA   F ++  E           KF   TLL+ACA   + +
Sbjct: 455 DKVSWNAVLTGYARRGQREEAMTSFSEMQWETRP-------SKFTFETLLAACANISSLE 507

Query: 102 YGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
            G+QIH  ++    +++ V   ALV +Y KC
Sbjct: 508 QGKQIHCFMIRNCYEINVVCRGALVEVYTKC 538


>ref|XP_006434327.1| hypothetical protein CICLE_v10000495mg [Citrus clementina]
           gi|557536449|gb|ESR47567.1| hypothetical protein
           CICLE_v10000495mg [Citrus clementina]
          Length = 681

 Score =  100 bits (249), Expect = 2e-19
 Identities = 50/104 (48%), Positives = 72/104 (69%)
 Frame = -2

Query: 312 RRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATLL 133
           R L  +MP  + +A N+++H Y+R G  +EA  LFK+++S+L    L C  D FVLAT++
Sbjct: 123 RTLFNDMPRRNAIAWNSMIHCYVRNGFAREAVRLFKELNSDL-VERLQC--DAFVLATVI 179

Query: 132 SACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKCESF 1
            ACA+  A +YG+QIHS I++  +D DSVLGS+LVN+Y KC  F
Sbjct: 180 GACADLAALEYGKQIHSHILVNGLDFDSVLGSSLVNLYGKCGDF 223



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/102 (31%), Positives = 55/102 (53%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           A+ +   MP    ++ N+++    + G P EA +LF       N   L    DKF LA++
Sbjct: 389 AKHIFRTMPNKSLISWNSMIVGLSQNGSPIEALDLF------CNMNKLDLRMDKFSLASV 442

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           +SACA   + + G Q+ +R+ I  +D D ++ ++LV+ Y KC
Sbjct: 443 ISACANISSLELGEQVFARVTIIGLDSDQIISTSLVDFYCKC 484


>ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540484|gb|EEF42051.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 681

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 50/102 (49%), Positives = 75/102 (73%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           A++L  EMP  + VA N+++H Y R G  +EA  LFK+++S  N +  SCG D FVLA++
Sbjct: 123 AKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNS--NPLEKSCG-DTFVLASV 179

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + ACA+  A +YG+Q+H+RI++  V+LDSVL S+L+N+YAKC
Sbjct: 180 IGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKC 221



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/102 (28%), Positives = 56/102 (54%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           A+ + E MP    ++ N+++    +   P EA ++F K++       L    D+F LA++
Sbjct: 390 AKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNK------LDLRMDRFSLASV 443

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           +SACA   + + G Q+ +R +I  ++ D  + ++LV+ Y KC
Sbjct: 444 ISACACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKC 485


>ref|XP_002302206.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344485|gb|EEE81479.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 681

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/102 (47%), Positives = 70/102 (68%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           ARRL  EMP  + V  N+++H+Y R G P+EA  LFK+++  L+ +  SC  D FVLAT+
Sbjct: 122 ARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLFKELN--LDPLDKSC-CDTFVLATV 178

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           + AC +      G+QIH+RI+I  ++LDSVL S+L+N+Y KC
Sbjct: 179 IGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKC 220


>gb|EXB42572.1| Putative pentatricopeptide repeat-containing protein [Morus
           notabilis]
          Length = 951

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 47/102 (46%), Positives = 66/102 (64%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           A+ L +EMP    VA  A++H Y R GQP++A  LFK++SS     S     DKFVLAT+
Sbjct: 158 AQSLFDEMPWKSCVAWTAMIHGYARNGQPKDALRLFKRLSSNALEESFV---DKFVLATV 214

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           +  C + +A   G+QIH+ I+I +V++DS L S+LVN Y KC
Sbjct: 215 IGVCTDLVALGCGKQIHAHILIDKVEIDSALSSSLVNFYGKC 256



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/102 (30%), Positives = 60/102 (58%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           A+ + + MP    ++ N+++    + G P +A +LF+    E+N + L    DKF +A+ 
Sbjct: 425 AKHIFKTMPRRSLISWNSMMIGLCQNGCPMDALDLFQ----EMNNLGLKM--DKFSVASA 478

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           +SACA   + ++G QI +R VI  ++ D ++ ++L++ Y KC
Sbjct: 479 ISACAGISSLEFGEQIFARAVIIGLEHDEIISNSLLDFYCKC 520


>ref|XP_004237912.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like isoform 1 [Solanum
           lycopersicum] gi|460384427|ref|XP_004237913.1|
           PREDICTED: putative pentatricopeptide repeat-containing
           protein At1g77010, mitochondrial-like isoform 2 [Solanum
           lycopersicum]
          Length = 685

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKK-VSSELNTMSLSCGSDKFVLAT 139
           ARRLL EMP  ++V  N ++H Y + G P  A  LFK+ +  +   M  +   D FVLAT
Sbjct: 122 ARRLLSEMPRKNEVVWNGLIHGYAKMGFPGVALCLFKEFIDWDFREMGGASHIDSFVLAT 181

Query: 138 LLSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAK 13
            L ACA+  + D G+QIH+RI++ +V++DSVL S+LVNMY K
Sbjct: 182 ALGACADTRSADLGKQIHARIIVNEVEVDSVLASSLVNMYGK 223



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/102 (33%), Positives = 59/102 (57%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR+L E MP    ++ N+++    + G P EA +LF +    +N M      DKF  +++
Sbjct: 393 ARQLFESMPYKSLISWNSMIIGLNQNGCPVEALDLFYR----MNRMDFRM--DKFSFSSV 446

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           +SACA   + + G QI +R+VI  +D D ++ ++L++ Y KC
Sbjct: 447 ISACASIASVELGEQIFARVVIIGLDGDQIITTSLIDFYCKC 488


>ref|XP_006364856.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g77010, mitochondrial-like [Solanum tuberosum]
          Length = 685

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKK-VSSELNTMSLSCGSDKFVLAT 139
           AR LL EMP  ++V  N ++H Y + G P  A  LFK+ +  +      +   D FVLAT
Sbjct: 122 ARSLLSEMPRKNEVVWNGLIHGYAKMGFPGVALCLFKEFIDWDFRETGAASHIDSFVLAT 181

Query: 138 LLSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAK 13
            L ACA   + D G+QIH+RI++ +V++DSVL S+LVNMY K
Sbjct: 182 ALGACANARSVDLGKQIHARIIVDEVEVDSVLASSLVNMYGK 223



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/102 (34%), Positives = 58/102 (56%)
 Frame = -2

Query: 315 ARRLLEEMPVVDDVACNAVLHAYIRRGQPQEAFNLFKKVSSELNTMSLSCGSDKFVLATL 136
           AR+L E MP    ++ N+++    + G P EA NLF +    +N M      DKF  +++
Sbjct: 393 ARQLFESMPYKSLISWNSMIIGLNQNGCPVEALNLFYR----MNRMDFRM--DKFSFSSV 446

Query: 135 LSACAECLAYDYGRQIHSRIVIGQVDLDSVLGSALVNMYAKC 10
           +SACA   + + G QI +R VI  +D D ++ ++L++ Y KC
Sbjct: 447 ISACASIASVELGEQIFARAVIIGIDCDQIISTSLIDFYCKC 488