BLASTX nr result
ID: Zingiber24_contig00046122
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00046122
(479 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-l... 103 2e-20
emb|CBI33270.3| unnamed protein product [Vitis vinifera] 103 2e-20
ref|XP_004288177.1| PREDICTED: polyadenylate-binding protein 2-l... 102 4e-20
gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus pe... 102 4e-20
ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-l... 102 7e-20
ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, par... 102 7e-20
ref|XP_006426354.1| hypothetical protein CICLE_v100264481mg, par... 102 7e-20
ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-l... 102 7e-20
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co... 100 2e-19
gb|EPS60140.1| hypothetical protein M569_14665, partial [Genlise... 100 3e-19
ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Popu... 100 3e-19
ref|NP_201329.1| RNA recognition motif-containing protein [Arabi... 99 6e-19
ref|XP_006279497.1| hypothetical protein CARUB_v10027046mg, part... 99 6e-19
ref|XP_002866661.1| polyadenylate-binding protein family protein... 99 6e-19
ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [A... 98 1e-18
ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 i... 98 1e-18
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 i... 98 1e-18
gb|ACU19123.1| unknown [Glycine max] 98 1e-18
ref|XP_002525843.1| poly-A binding protein, putative [Ricinus co... 98 1e-18
gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK... 98 1e-18
>ref|XP_003635560.1| PREDICTED: polyadenylate-binding protein 2-like, partial [Vitis
vinifera]
Length = 130
Score = 103 bits (258), Expect = 2e-20
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE EAVQEAL LNESELHGRQ+KV AKRTNVPGMKQFRPRRFNPYMGY RR
Sbjct: 46 YVEFLEVEAVQEALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYMGYRFRR 101
>emb|CBI33270.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 103 bits (258), Expect = 2e-20
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE EAVQEAL LNESELHGRQ+KV AKRTNVPGMKQFRPRRFNPYMGY RR
Sbjct: 61 YVEFLEVEAVQEALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYMGYRFRR 116
>ref|XP_004288177.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Fragaria
vesca subsp. vesca]
Length = 226
Score = 102 bits (255), Expect = 4e-20
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE EAVQ+AL LNESELHGRQ+KV KRTNVPGMKQFRPRRFNPYMGYS RR
Sbjct: 142 YVEFLEAEAVQKALALNESELHGRQLKVLPKRTNVPGMKQFRPRRFNPYMGYSFRR 197
>gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus persica]
Length = 221
Score = 102 bits (255), Expect = 4e-20
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLETEAVQEAL LNESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYMGY RR
Sbjct: 137 YVEFLETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRFRR 192
>ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-like [Citrus sinensis]
Length = 218
Score = 102 bits (253), Expect = 7e-20
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE +AVQEALQLNESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYMGY RR
Sbjct: 134 YVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRGRR 189
>ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
clementina] gi|557528345|gb|ESR39595.1| hypothetical
protein CICLE_v100264481mg, partial [Citrus clementina]
Length = 122
Score = 102 bits (253), Expect = 7e-20
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE +AVQEALQLNESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYMGY RR
Sbjct: 38 YVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRGRR 93
>ref|XP_006426354.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
clementina] gi|557528344|gb|ESR39594.1| hypothetical
protein CICLE_v100264481mg, partial [Citrus clementina]
Length = 114
Score = 102 bits (253), Expect = 7e-20
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE +AVQEALQLNESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYMGY RR
Sbjct: 38 YVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRGRR 93
>ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 222
Score = 102 bits (253), Expect = 7e-20
Identities = 49/56 (87%), Positives = 51/56 (91%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLETEAVQEAL LNESELHGRQ+KV KRTNVPGMKQFRPRRF+PYMGY RR
Sbjct: 138 YVEFLETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQFRPRRFSPYMGYRFRR 193
>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein,
putative [Ricinus communis]
Length = 218
Score = 100 bits (249), Expect = 2e-19
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE EA+QEAL LNESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYMGY RR
Sbjct: 134 YVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRFRR 189
>gb|EPS60140.1| hypothetical protein M569_14665, partial [Genlisea aurea]
Length = 109
Score = 100 bits (248), Expect = 3e-19
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE EA+QEALQLNESELHGRQ+KV AKRTNVPGMK FRPRRFNPY+ Y RR
Sbjct: 38 YVEFLEAEAIQEALQLNESELHGRQLKVMAKRTNVPGMKLFRPRRFNPYIAYGFRR 93
>ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| hypothetical protein
POPTR_0005s07440g [Populus trichocarpa]
Length = 218
Score = 99.8 bits (247), Expect = 3e-19
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEFLE EAVQEAL LNESELHGRQ+KV+ KRTNVPGMKQ+RPRR NPYMGY RR
Sbjct: 134 YVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPRRINPYMGYRFRR 189
>ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding
protein II-like [Arabidopsis thaliana]
gi|10178188|dbj|BAB11662.1| poly(A)-binding protein
II-like [Arabidopsis thaliana]
gi|23197620|gb|AAN15337.1| poly(A)-binding protein
II-like [Arabidopsis thaliana]
gi|332010647|gb|AED98030.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 220
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEF+E EAVQEALQLNESELHGRQ+KV KRTNVPG+KQFR RRFNPYMGY RR
Sbjct: 136 YVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRR 191
>ref|XP_006279497.1| hypothetical protein CARUB_v10027046mg, partial [Capsella rubella]
gi|482548201|gb|EOA12395.1| hypothetical protein
CARUB_v10027046mg, partial [Capsella rubella]
Length = 233
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEF+E EAVQEALQLNESELHGRQ+KV KRTNVPG+KQFR RRFNPYMGY RR
Sbjct: 149 YVEFVEVEAVQEALQLNESELHGRQLKVMQKRTNVPGLKQFRGRRFNPYMGYRFRR 204
>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata] gi|297312496|gb|EFH42920.1|
polyadenylate-binding protein family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 220
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEF+E EAVQEALQLNESELHGRQ+KV KRTNVPG+KQFR RRFNPYMGY RR
Sbjct: 136 YVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRR 191
>ref|XP_006828070.1| hypothetical protein AMTR_s00008p00267630 [Amborella trichopoda]
gi|548832705|gb|ERM95486.1| hypothetical protein
AMTR_s00008p00267630 [Amborella trichopoda]
Length = 220
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEF+E EAVQ AL LNESELHGRQ+KV AKRTNVPGMKQFRPRRFNPY+ Y +RR
Sbjct: 136 YVEFVELEAVQNALLLNESELHGRQLKVLAKRTNVPGMKQFRPRRFNPYLAYRSRR 191
>ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 isoform X2 [Glycine max]
Length = 141
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/56 (82%), Positives = 49/56 (87%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEF+E EAVQEAL LNESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYM Y RR
Sbjct: 57 YVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRR 112
>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 isoform X1 [Glycine max]
Length = 215
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/56 (82%), Positives = 49/56 (87%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEF+E EAVQEAL LNESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYM Y RR
Sbjct: 131 YVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRR 186
>gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/56 (82%), Positives = 49/56 (87%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEF+E EAVQEAL LNESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYM Y RR
Sbjct: 131 YVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRR 186
>ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
gi|223534848|gb|EEF36537.1| poly-A binding protein,
putative [Ricinus communis]
Length = 198
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/55 (85%), Positives = 50/55 (90%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTR 315
YVEFLE EAVQEAL LNESELHGRQ+KV AKRTNVPGMKQFRPRR NPYMG++ R
Sbjct: 114 YVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNVPGMKQFRPRRPNPYMGFAPR 168
>gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK38775.1| unknown
[Medicago truncatula]
Length = 216
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = -1
Query: 479 YVEFLETEAVQEALQLNESELHGRQIKVAAKRTNVPGMKQFRPRRFNPYMGYSTRR 312
YVEF+ETEAVQEAL L+ESELHGRQ+KV KRTNVPGMKQ+RPRRFNPYM Y RR
Sbjct: 132 YVEFVETEAVQEALLLSESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRR 187