BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046089
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ18914.1| hypothetical protein PRUPE_ppa004522mg [Prunus pe...    81   2e-13
ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|NP_197188.1| pentatricopeptide repeat-containing protein [Ar...    78   1e-12
ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containi...    77   2e-12
ref|XP_002871739.1| pentatricopeptide repeat-containing protein ...    77   3e-12
ref|XP_006287060.1| hypothetical protein CARUB_v10000209mg [Caps...    75   1e-11
ref|XP_002324059.1| pentatricopeptide repeat-containing family p...    74   2e-11
ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloproteas...    74   3e-11
ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]    74   3e-11
gb|ESW06989.1| hypothetical protein PHAVU_010G093000g [Phaseolus...    73   3e-11
gb|EOY22999.1| Tetratricopeptide repeat-like superfamily protein...    73   4e-11
gb|ESW32564.1| hypothetical protein PHAVU_002G332900g [Phaseolus...    72   8e-11
ref|XP_004306142.1| PREDICTED: ATP-dependent zinc metalloproteas...    72   8e-11
ref|XP_006646428.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_006572948.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_006572946.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_004491806.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat...    71   2e-10
ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat...    71   2e-10

>gb|EMJ18914.1| hypothetical protein PRUPE_ppa004522mg [Prunus persica]
          Length = 505

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 38/78 (48%), Positives = 51/78 (65%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           PN+LTFPF++KSC   AAL+ G Q H            YVQN LV  Y +C +I +A+++
Sbjct: 118 PNQLTFPFLIKSCASAAALKEGRQVHVGVVKCGLDCDVYVQNNLVHFYGACKKIKDAQRV 177

Query: 260 FEEMSLWTVVSWNTILTA 313
           F+ MS+ TVVSWN +LTA
Sbjct: 178 FDGMSVRTVVSWNAVLTA 195


>ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/78 (46%), Positives = 50/78 (64%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           PN LTFPF+LK+C  LA L+ G Q H            YV+N L++ Y SC R+  AR++
Sbjct: 129 PNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDLDVYVRNTLINFYGSCKRMSGARKV 188

Query: 260 FEEMSLWTVVSWNTILTA 313
           F+EM+  T+VSWN ++TA
Sbjct: 189 FDEMTERTLVSWNAVITA 206


>ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g16860 gi|9755687|emb|CAC01699.1| putative protein
           [Arabidopsis thaliana] gi|332004967|gb|AED92350.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 850

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 33/80 (41%), Positives = 52/80 (65%)
 Frame = +2

Query: 77  TPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQ 256
           TP+  TFPFV K+C  ++++R G   H            +V NALV++YS C  + +AR+
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183

Query: 257 LFEEMSLWTVVSWNTILTAH 316
           +F+EMS+W VVSWN+I+ ++
Sbjct: 184 VFDEMSVWDVVSWNSIIESY 203


>ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cucumis sativus]
          Length = 516

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 36/78 (46%), Positives = 49/78 (62%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           PN LTFPF+LK+C  LA L+ G Q H            YV+N L+  Y SC R+  AR++
Sbjct: 129 PNNLTFPFLLKACATLATLQEGKQFHAIAIKCGLDLDVYVRNTLIYFYGSCKRMSGARKV 188

Query: 260 FEEMSLWTVVSWNTILTA 313
           F+EM+  T+VSWN ++TA
Sbjct: 189 FDEMTERTLVSWNAVITA 206


>ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317576|gb|EFH47998.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 850

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 32/80 (40%), Positives = 52/80 (65%)
 Frame = +2

Query: 77  TPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQ 256
           TP+  TFPFV K+C  ++++R G  +H            +V NALV++YS C  + +AR+
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARK 183

Query: 257 LFEEMSLWTVVSWNTILTAH 316
           +F+EM +W VVSWN+I+ ++
Sbjct: 184 VFDEMPVWDVVSWNSIIESY 203


>ref|XP_006287060.1| hypothetical protein CARUB_v10000209mg [Capsella rubella]
           gi|482555766|gb|EOA19958.1| hypothetical protein
           CARUB_v10000209mg [Capsella rubella]
          Length = 850

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 31/80 (38%), Positives = 51/80 (63%)
 Frame = +2

Query: 77  TPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQ 256
           TP+  TFPFV K+C  ++++  G+  H            +V NALV++Y  C  + +AR+
Sbjct: 124 TPDNYTFPFVFKACGEISSVICGVSAHGLSLVTGFMSNVFVGNALVAMYYRCGSLGDARK 183

Query: 257 LFEEMSLWTVVSWNTILTAH 316
           +F+EMS+W VVSWN+I+ ++
Sbjct: 184 VFDEMSVWDVVSWNSIIESY 203



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/76 (36%), Positives = 39/76 (51%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           P+ +TF  VL  C  + A  LG Q H            +V N LV +Y+ C  +DEA  +
Sbjct: 227 PDHITFVNVLPPCASIGAHSLGKQLHGFATTSEIIQNMFVGNCLVDMYAKCGMMDEANTV 286

Query: 260 FEEMSLWTVVSWNTIL 307
           F  MS+  VVSWN ++
Sbjct: 287 FSNMSVKDVVSWNAMV 302


>ref|XP_002324059.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222867061|gb|EEF04192.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 505

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/78 (46%), Positives = 47/78 (60%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           PN  TFPFVLK+C    AL  G Q H            YV N LV LY SC RI +A ++
Sbjct: 117 PNNFTFPFVLKACATCLALEEGKQVHADIFKFGLDCDVYVNNNLVHLYGSCKRIWDACKV 176

Query: 260 FEEMSLWTVVSWNTILTA 313
           F+EM + ++VSWN+++TA
Sbjct: 177 FDEMPVRSIVSWNSVITA 194


>ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
            chloroplastic-like [Vitis vinifera]
          Length = 1146

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/102 (38%), Positives = 58/102 (56%)
 Frame = +2

Query: 8    RNLPYESILHFLLMXXXXXXXXATPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXX 187
            R+ P E+I  +L M         +P++LTFP +LK+C  ++A   G +            
Sbjct: 738  RDSPREAIGAYLEMRSLGI----SPDKLTFPILLKACAAISAFNEGRKIQVDVMKHGLDC 793

Query: 188  XXYVQNALVSLYSSCSRIDEARQLFEEMSLWTVVSWNTILTA 313
              YVQN ++  Y SC RI +AR++F+EMS  TVVSWN +L+A
Sbjct: 794  NVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSA 835


>ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Glycine max]
          Length = 505

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/80 (46%), Positives = 49/80 (61%)
 Frame = +2

Query: 74  ATPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEAR 253
           A PN+LTFPF+LKSC   +AL  G Q H            YV N L++ Y  C +I +AR
Sbjct: 112 AMPNKLTFPFLLKSCAVASALFEGKQVHADAVKCGLDSDVYVGNNLINFYGCCKKIVDAR 171

Query: 254 QLFEEMSLWTVVSWNTILTA 313
           ++F EM   TVVSWN+++TA
Sbjct: 172 KVFGEMPERTVVSWNSVMTA 191


>emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
          Length = 505

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 39/102 (38%), Positives = 58/102 (56%)
 Frame = +2

Query: 8   RNLPYESILHFLLMXXXXXXXXATPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXX 187
           R+ P E+I  +L M         +P++LTFP +LK+C  ++A   G +            
Sbjct: 97  RDSPREAIGAYLEMRSLGI----SPDKLTFPILLKACAXISAFNEGRKIQVDVMKHGLDC 152

Query: 188 XXYVQNALVSLYSSCSRIDEARQLFEEMSLWTVVSWNTILTA 313
             YVQN ++  Y SC RI +AR++F+EMS  TVVSWN +L+A
Sbjct: 153 NVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSA 194


>gb|ESW06989.1| hypothetical protein PHAVU_010G093000g [Phaseolus vulgaris]
          Length = 502

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 40/99 (40%), Positives = 56/99 (56%)
 Frame = +2

Query: 17  PYESILHFLLMXXXXXXXXATPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXY 196
           P E++L F  M        A PN+LTFPF++KSC   +AL  G Q H            Y
Sbjct: 96  PLEAVLVFRKMRERG----AMPNKLTFPFLIKSCAVASALGEGRQVHADAFKCGLDSDVY 151

Query: 197 VQNALVSLYSSCSRIDEARQLFEEMSLWTVVSWNTILTA 313
           V N L++ Y  C +I +A ++F+EM   TVVSWN+++TA
Sbjct: 152 VGNNLINFYGRCKKIVDAIKVFDEMPERTVVSWNSVITA 190


>gb|EOY22999.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao]
          Length = 467

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 37/92 (40%), Positives = 52/92 (56%)
 Frame = +2

Query: 41  LLMXXXXXXXXATPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSL 220
           LL+         +P+ LTFPF+LK CTR    R+G   H            YVQN+LV+ 
Sbjct: 22  LLLFKQMLFNGISPDCLTFPFLLKECTRRFDSRVGCSIHGKTIKFGWFRDLYVQNSLVNF 81

Query: 221 YSSCSRIDEARQLFEEMSLWTVVSWNTILTAH 316
           YS+C  ++ AR+LF+EM    VVSWN+++  H
Sbjct: 82  YSACGFLNSARKLFDEMLNRDVVSWNSMIIGH 113


>gb|ESW32564.1| hypothetical protein PHAVU_002G332900g [Phaseolus vulgaris]
          Length = 779

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 33/78 (42%), Positives = 46/78 (58%)
 Frame = +2

Query: 77  TPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQ 256
           TPN  TFPF+LK+C+ L A++LG Q H            YV  AL+ +Y+ C    EAR 
Sbjct: 100 TPNNFTFPFLLKACSALQAIQLGRQIHDHALTLGLQADLYVSTALLDMYAKCGNFFEART 159

Query: 257 LFEEMSLWTVVSWNTILT 310
           +F+ MS   +VSWN I++
Sbjct: 160 IFDSMSHRDIVSWNAIIS 177


>ref|XP_004306142.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1152

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/78 (46%), Positives = 46/78 (58%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           PN+LTFPF+LK C    ALR G Q H            YV N LV  Y  C ++ +A ++
Sbjct: 765 PNKLTFPFLLKCCAMAPALREGRQAHGCVWKLGLECDVYVGNNLVHFYGVCKKVKDAVKV 824

Query: 260 FEEMSLWTVVSWNTILTA 313
           FEEMS  +VVSWN ++TA
Sbjct: 825 FEEMSDRSVVSWNAVVTA 842


>ref|XP_006646428.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Oryza brachyantha]
          Length = 1035

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/79 (40%), Positives = 50/79 (63%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           P+ LTFPF+LK+C  ++AL+ G Q H            +V N+L+ LY++C  I  AR +
Sbjct: 554 PDNLTFPFILKACAGISALKEGEQIHDHIMKLGLLQDIFVSNSLIHLYAACGNICYARSV 613

Query: 260 FEEMSLWTVVSWNTILTAH 316
           F+EMS+  VVSWN+++  +
Sbjct: 614 FDEMSVKDVVSWNSLICGY 632


>ref|XP_006572948.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/79 (40%), Positives = 48/79 (60%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           P+  T+PFVLK+C+ L AL+ G+Q H            +VQN L+S+Y  C  I+ A  +
Sbjct: 129 PDNFTYPFVLKACSLLVALKEGVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVV 188

Query: 260 FEEMSLWTVVSWNTILTAH 316
           FE+M   +V SW++I+ AH
Sbjct: 189 FEQMDEKSVASWSSIIGAH 207


>ref|XP_006572946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Glycine max]
          Length = 605

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/79 (40%), Positives = 48/79 (60%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           P+  T+PFVLK+C+ L AL+ G+Q H            +VQN L+S+Y  C  I+ A  +
Sbjct: 129 PDNFTYPFVLKACSLLVALKEGVQIHAHVFKAGLEVDVFVQNGLISMYGKCGAIEHAGVV 188

Query: 260 FEEMSLWTVVSWNTILTAH 316
           FE+M   +V SW++I+ AH
Sbjct: 189 FEQMDEKSVASWSSIIGAH 207


>ref|XP_004491806.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g36730-like [Cicer arietinum]
          Length = 508

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 40/99 (40%), Positives = 52/99 (52%)
 Frame = +2

Query: 17  PYESILHFLLMXXXXXXXXATPNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXY 196
           P ESI  F  M          PN+LTFPFV KSC        G+Q H            Y
Sbjct: 102 PIESIWVFKKMRENA----VKPNKLTFPFVFKSCAMADRFFEGMQVHADAFKFGLDSDVY 157

Query: 197 VQNALVSLYSSCSRIDEARQLFEEMSLWTVVSWNTILTA 313
           V N L++ Y  C +I +AR++F+EM   TVVSWN+++TA
Sbjct: 158 VCNNLINFYGCCKKIVQARKVFDEMPERTVVSWNSVMTA 196


>ref|XP_006341113.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Solanum tuberosum]
          Length = 687

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           PN  TFPF+LKSCTRL+   LG++ H            +V+  LV  Y+ C  +D+A Q+
Sbjct: 111 PNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFDYDVFVKTGLVCFYARCGFLDDAHQM 170

Query: 260 FEEMSLWTVVSWNTILTAH 316
           F+++    VVSW  I+T +
Sbjct: 171 FDDIPEKNVVSWTAIMTGY 189


>ref|XP_004246883.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Solanum lycopersicum]
          Length = 688

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/79 (39%), Positives = 46/79 (58%)
 Frame = +2

Query: 80  PNELTFPFVLKSCTRLAALRLGIQTHXXXXXXXXXXXXYVQNALVSLYSSCSRIDEARQL 259
           PN  TFPF+LKSCTRL+   LG++ H            +V+  LV  Y+ C  +D+A Q+
Sbjct: 111 PNNFTFPFLLKSCTRLSDFELGVKAHGLVVKGGFDYDVFVKTGLVCFYARCGFLDDAHQM 170

Query: 260 FEEMSLWTVVSWNTILTAH 316
           F+++    VVSW  I+T +
Sbjct: 171 FDDIPEKNVVSWTAIITGY 189