BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00046056
         (351 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...    96   6e-18
gb|EPS69231.1| hypothetical protein M569_05535 [Genlisea aurea]        88   1e-15
gb|EMJ27978.1| hypothetical protein PRUPE_ppa018015mg [Prunus pe...    88   1e-15
ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
gb|EXB44248.1| hypothetical protein L484_001646 [Morus notabilis]      85   1e-14
gb|EOY06911.1| Tetratricopeptide repeat-like superfamily protein...    85   1e-14
ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
gb|ESW26458.1| hypothetical protein PHAVU_003G121400g [Phaseolus...    83   4e-14
ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containi...    82   9e-14
ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [S...    76   5e-12
ref|XP_004965051.1| PREDICTED: pentatricopeptide repeat-containi...    73   3e-11
ref|XP_004980084.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-11
ref|XP_002519323.1| pentatricopeptide repeat-containing protein,...    72   8e-11
ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|NP_001147320.1| selenium-binding protein-like [Zea mays] gi|...    71   1e-10
gb|ACF82562.1| unknown [Zea mays] gi|413957085|gb|AFW89734.1| se...    71   2e-10
ref|XP_006655943.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group] g...    69   6e-10
gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indi...    69   6e-10
emb|CBI24015.3| unnamed protein product [Vitis vinifera]               69   8e-10

>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = -3

Query: 250 IDSCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPF 71
           +DSC ++AEL+QYHSQ+IRLGLS+DNDA GR+IKF A   SGD+ YAL +   +PHPD +
Sbjct: 27  LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAY 86

Query: 70  VFNTLFR 50
           ++NT+FR
Sbjct: 87  IYNTIFR 93


>gb|EPS69231.1| hypothetical protein M569_05535 [Genlisea aurea]
          Length = 628

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 38/78 (48%), Positives = 58/78 (74%)
 Frame = -3

Query: 283 LATERATLRSSIDSCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALR 104
           ++T R +  ++++SC S+A+L+QYH+ +I+LGLS DNDA GR++KF      GD  YAL+
Sbjct: 15  VSTARKSPFTNLESCSSMADLKQYHAHIIKLGLSYDNDAMGRVVKFCCVSECGDFNYALK 74

Query: 103 LLALLPHPDPFVFNTLFR 50
           +   LPHPD +V+NT+FR
Sbjct: 75  VFDKLPHPDAYVYNTIFR 92


>gb|EMJ27978.1| hypothetical protein PRUPE_ppa018015mg [Prunus persica]
          Length = 624

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
 Frame = -3

Query: 277 TERATLRSSIDSCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLL 98
           T+ + LR  I+SC ++AELRQ HS++IRLGL++DNDA GR+IKF A   +GD+ YAL++ 
Sbjct: 19  TQISPLRG-IESCSTMAELRQLHSKVIRLGLAADNDAMGRVIKFCALSKNGDLGYALQVF 77

Query: 97  ALLPHPDPFVFNTLFRA-LPC--PALSLPLYADML 2
             + HPD F++NT+ R  L C  P   + LY+ ML
Sbjct: 78  DTMLHPDAFIYNTVMRGYLQCHLPRNCIVLYSQML 112


>ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum tuberosum]
          Length = 628

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/78 (51%), Positives = 58/78 (74%)
 Frame = -3

Query: 277 TERATLRSSIDSCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLL 98
           T   TLR  ++SC S+++L+Q+H+Q+++ GLS DNDA GR+IKF A   SGD+ YAL++ 
Sbjct: 23  TSNNTLRG-LESCSSMSQLKQFHAQIVKHGLSYDNDAMGRVIKFCAISESGDLNYALQVF 81

Query: 97  ALLPHPDPFVFNTLFRAL 44
             LP PDPF++NT+ R L
Sbjct: 82  DRLPEPDPFIYNTVIRGL 99


>gb|EXB44248.1| hypothetical protein L484_001646 [Morus notabilis]
          Length = 633

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/80 (51%), Positives = 51/80 (63%)
 Frame = -3

Query: 283 LATERATLRSSIDSCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALR 104
           L   R  +      C S+A L+Q HS+ IRLGLSSDNDA GRLIKF A    GD+ YAL+
Sbjct: 20  LRRRRHEMEMETQRCSSMAHLKQLHSRAIRLGLSSDNDAMGRLIKFCAVSEHGDLSYALQ 79

Query: 103 LLALLPHPDPFVFNTLFRAL 44
           L   +P PD F++NT+ R L
Sbjct: 80  LFDQMPQPDAFIYNTIMRGL 99


>gb|EOY06911.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 628

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 37/68 (54%), Positives = 50/68 (73%)
 Frame = -3

Query: 253 SIDSCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDP 74
           ++ +C S+A L+Q+HS LI+LGLS+DNDA GR+IKF A   +G + Y L L   LPHPD 
Sbjct: 30  ALQTCSSMAHLKQHHSHLIKLGLSADNDAMGRIIKFCAISENGHLDYGLHLFDTLPHPDA 89

Query: 73  FVFNTLFR 50
           F++NTL R
Sbjct: 90  FIYNTLIR 97


>ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum lycopersicum]
          Length = 626

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/74 (51%), Positives = 56/74 (75%)
 Frame = -3

Query: 265 TLRSSIDSCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLP 86
           TLR  ++SC S+++L+Q+H+Q+++ GLS DNDA GR+IKF A    GD+ YAL++   LP
Sbjct: 25  TLRG-LESCSSMSKLKQFHAQIVKHGLSHDNDAMGRVIKFCAISELGDLSYALQVFDKLP 83

Query: 85  HPDPFVFNTLFRAL 44
            PDPF++NT+ R L
Sbjct: 84  EPDPFIYNTVIRGL 97


>gb|ESW26458.1| hypothetical protein PHAVU_003G121400g [Phaseolus vulgaris]
          Length = 604

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
 Frame = -3

Query: 241 CRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFN 62
           C S+ E +Q+HS L+RLGLS+DN A   ++ F +    GDI YAL+L   LP+PD F++N
Sbjct: 12  CSSMEEAKQHHSLLLRLGLSTDNHAMSGILSFCSLSNHGDINYALKLFTTLPNPDTFLYN 71

Query: 61  TLFRAL---PCPALSLPLYADML 2
           TLF+A      P+LSLP Y+ ML
Sbjct: 72  TLFKAFFISHNPSLSLPFYSHML 94


>ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 607

 Score = 81.6 bits (200), Expect = 9e-14
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
 Frame = -3

Query: 244 SCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVF 65
           +C S+AE++Q HS L+RLGLS++N A  R+  F +    GDI YAL+L   LP+PD F++
Sbjct: 11  ACSSMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLY 70

Query: 64  NTLFRAL----PCPALSLPLYADML 2
           NTLF+A       P+LSL  Y+ ML
Sbjct: 71  NTLFKAFFSLSQTPSLSLLFYSHML 95


>ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
           gi|241922440|gb|EER95584.1| hypothetical protein
           SORBIDRAFT_01g048560 [Sorghum bicolor]
          Length = 581

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 45/84 (53%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           S+AELRQ+HSQLIRLG++S    A RL+ FLA  P    PYA RLLA  P P P +FN L
Sbjct: 22  SIAELRQHHSQLIRLGVASHPAHARRLLSFLARDPDSHFPYASRLLAHHPAPHPALFNPL 81

Query: 55  FRALP--------CPALSLPLYAD 8
           F ALP           LSLPL+ D
Sbjct: 82  FSALPTRHAARLLALMLSLPLHPD 105


>ref|XP_004965051.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Setaria italica]
          Length = 601

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 43/84 (51%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           ++AELRQ+HSQL+RLGL+S    A RL+ FLA  P    PYA RLLA  P P P +FN L
Sbjct: 13  TIAELRQHHSQLVRLGLASHPSHARRLLSFLARDPDSHFPYAARLLAHHPDPHPALFNPL 72

Query: 55  FRALP--------CPALSLPLYAD 8
             ALP           LSLPL  D
Sbjct: 73  LSALPSRHAARLLALMLSLPLAPD 96


>ref|XP_004980084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like isoform X1 [Setaria italica]
          Length = 568

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 43/84 (51%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           ++AELRQ+HSQL+RLGL+S    A RL+ FLA  P    PYA RLLA  P P P +FN L
Sbjct: 62  TIAELRQHHSQLVRLGLASHPSHARRLLSFLARDPDSHFPYAARLLAHHPDPHPALFNPL 121

Query: 55  FRALP--------CPALSLPLYAD 8
             ALP           LSLPL  D
Sbjct: 122 LSALPPRHAARLLALMLSLPLPPD 145


>ref|XP_002519323.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541638|gb|EEF43187.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 396

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
 Frame = -3

Query: 244 SCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVF 65
           +C ++ +LRQYHSQ+IRLGLS+D     +LI F A   + D+ YA++L   +P+PD F +
Sbjct: 53  NCSTMPDLRQYHSQIIRLGLSADKHVMTQLINFSALSNNRDLAYAIKLFDSIPNPDAFFY 112

Query: 64  NTLFRAL---PCPALSLPLYADML 2
           NT+ +A      P  S+ LY+ ML
Sbjct: 113 NTIIKAYLQHLSPTNSILLYSHML 136


>ref|XP_003564043.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Brachypodium distachyon]
          Length = 599

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           +++EL+Q+HSQL+RLGL+S  +   RL+ FLA  P+G +PYA RLLA  P P P +FN L
Sbjct: 13  TISELKQHHSQLVRLGLASRPEHVRRLLAFLARDPAG-VPYAARLLAHHPDPHPALFNPL 71

Query: 55  FRALP--------CPALSLPLYAD 8
           F +LP           LSLPL+ D
Sbjct: 72  FASLPPHHAAAFLALMLSLPLHPD 95


>ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
           gi|195609890|gb|ACG26775.1| selenium-binding
           protein-like [Zea mays]
          Length = 605

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 44/84 (52%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           S A LRQ+HSQLIRLG++S    A RL+ FLA  P    PYA RLLA  P P P +FN L
Sbjct: 17  SFAVLRQHHSQLIRLGVASHAAHARRLLSFLARDPDSHFPYASRLLAHHPDPHPALFNPL 76

Query: 55  FRALP--------CPALSLPLYAD 8
           F ALP           LSLPL  D
Sbjct: 77  FSALPTRHAARLLALMLSLPLRPD 100


>gb|ACF82562.1| unknown [Zea mays] gi|413957085|gb|AFW89734.1| selenium-binding
           protein-like protein [Zea mays]
          Length = 605

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/84 (52%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           S A LRQ+HSQLIRLG++S    A RL+ FLA  P    PYA RLLA  P P P +FN L
Sbjct: 17  SFALLRQHHSQLIRLGVASHAAHARRLLSFLARDPDSHFPYASRLLAHHPDPHPALFNPL 76

Query: 55  FRALP--------CPALSLPLYAD 8
           F ALP           LSLPL  D
Sbjct: 77  FSALPTRHAARLLALMLSLPLRPD 100


>ref|XP_006655943.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Oryza brachyantha]
          Length = 598

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           +++ELRQ+HSQL+RLGL+S    A RL+ FLA  P+  +PYA RLLA  P P P + N L
Sbjct: 13  TISELRQHHSQLVRLGLASHPAHARRLLAFLARDPA-HLPYAARLLAHHPDPRPALLNPL 71

Query: 55  FRALP--------CPALSLPLYAD 8
           F +LP         P LSLPL  D
Sbjct: 72  FASLPPRAAAALLAPMLSLPLAPD 95


>ref|NP_001057222.1| Os06g0231400 [Oryza sativa Japonica Group]
           gi|51535413|dbj|BAD37283.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113595262|dbj|BAF19136.1| Os06g0231400 [Oryza
           sativa Japonica Group] gi|125596589|gb|EAZ36369.1|
           hypothetical protein OsJ_20697 [Oryza sativa Japonica
           Group]
          Length = 602

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           ++AELRQ+HSQL+RLGL+S    A RL+ FLA  P+  +PYA RLLA  P P P + N L
Sbjct: 17  TIAELRQHHSQLVRLGLASHPPHARRLLAFLARDPA-HLPYAARLLAHHPDPRPALLNPL 75

Query: 55  FRALPCPA--------LSLPLYAD 8
           F +LP  A        LSLPL  D
Sbjct: 76  FASLPPRAAASLLALMLSLPLLPD 99


>gb|EAZ00256.1| hypothetical protein OsI_22267 [Oryza sativa Indica Group]
          Length = 602

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
 Frame = -3

Query: 235 SLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYALRLLALLPHPDPFVFNTL 56
           ++AELRQ+HSQL+RLGL+S    A RL+ FLA  P+  +PYA RLLA  P P P + N L
Sbjct: 17  TIAELRQHHSQLVRLGLASHPPHARRLLAFLARDPA-HLPYAARLLAHHPDPRPALLNPL 75

Query: 55  FRALPCPA--------LSLPLYAD 8
           F +LP  A        LSLPL  D
Sbjct: 76  FASLPPRAAASLLALMLSLPLLPD 99


>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
 Frame = -3

Query: 250 IDSCRSLAELRQYHSQLIRLGLSSDNDAAGRLIKFLAFHPSGDIPYAL---------RLL 98
           +DSC ++AEL+QYHSQ+IRLGLS+DNDA GR+IKF A   SG + + L         R+L
Sbjct: 27  LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGYLRWQLARNCIFMYSRML 86

Query: 97  ALLPHPDPFVFNTLFRA 47
                P+ F +  L RA
Sbjct: 87  HKSVSPNKFTYPPLIRA 103