BLASTX nr result
ID: Zingiber24_contig00045948
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045948
(270 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004968358.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 97 2e-18
ref|XP_004968357.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 97 2e-18
ref|XP_004968356.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 97 2e-18
ref|XP_004968355.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 97 2e-18
ref|XP_004968354.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 97 2e-18
gb|AFW80160.1| putative DEAD-box ATP-dependent RNA helicase fami... 97 3e-18
ref|NP_001183594.1| uncharacterized protein LOC100502188 [Zea ma... 97 3e-18
ref|XP_002455105.1| hypothetical protein SORBIDRAFT_03g004420 [S... 96 4e-18
ref|NP_001168054.1| putative DEAD-box ATP-dependent RNA helicase... 95 8e-18
ref|XP_002884587.1| hypothetical protein ARALYDRAFT_477953 [Arab... 89 8e-16
gb|EXC20307.1| Shaggy-related protein kinase epsilon [Morus nota... 88 1e-15
gb|EOY06862.1| DEAD box RNA helicase family protein isoform 2 [T... 88 1e-15
gb|EOY06861.1| DEAD box RNA helicase family protein isoform 1 [T... 88 1e-15
ref|XP_003565397.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 88 1e-15
ref|XP_006407941.1| hypothetical protein EUTSA_v10019956mg [Eutr... 88 1e-15
ref|NP_187299.1| DEAD-box ATP-dependent RNA helicase 40 [Arabido... 87 2e-15
gb|EPS66944.1| hypothetical protein M569_07831 [Genlisea aurea] 87 2e-15
ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 87 2e-15
tpg|DAA59016.1| TPA: putative DEAD-box ATP-dependent RNA helicas... 87 2e-15
tpg|DAA59017.1| TPA: putative DEAD-box ATP-dependent RNA helicas... 87 2e-15
>ref|XP_004968358.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X5
[Setaria italica]
Length = 672
Score = 97.1 bits (240), Expect = 2e-18
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = -3
Query: 184 SSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDP 17
+S ++P+SK PRYAPPDPTLP PWRALIDG+T YLY+WNP+TKVTQYERPV+ P
Sbjct: 2 ASSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNPDTKVTQYERPVAAVP 57
>ref|XP_004968357.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X4
[Setaria italica]
Length = 667
Score = 97.1 bits (240), Expect = 2e-18
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = -3
Query: 184 SSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDP 17
+S ++P+SK PRYAPPDPTLP PWRALIDG+T YLY+WNP+TKVTQYERPV+ P
Sbjct: 2 ASSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNPDTKVTQYERPVAAVP 57
>ref|XP_004968356.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X3
[Setaria italica]
Length = 668
Score = 97.1 bits (240), Expect = 2e-18
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = -3
Query: 184 SSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDP 17
+S ++P+SK PRYAPPDPTLP PWRALIDG+T YLY+WNP+TKVTQYERPV+ P
Sbjct: 2 ASSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNPDTKVTQYERPVAAVP 57
>ref|XP_004968355.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X2
[Setaria italica]
Length = 668
Score = 97.1 bits (240), Expect = 2e-18
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = -3
Query: 184 SSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDP 17
+S ++P+SK PRYAPPDPTLP PWRALIDG+T YLY+WNP+TKVTQYERPV+ P
Sbjct: 2 ASSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNPDTKVTQYERPVAAVP 57
>ref|XP_004968354.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like isoform X1
[Setaria italica]
Length = 702
Score = 97.1 bits (240), Expect = 2e-18
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = -3
Query: 184 SSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDP 17
+S ++P+SK PRYAPPDPTLP PWRALIDG+T YLY+WNP+TKVTQYERPV+ P
Sbjct: 2 ASSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNPDTKVTQYERPVAAVP 57
>gb|AFW80160.1| putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 232
Score = 96.7 bits (239), Expect = 3e-18
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = -3
Query: 184 SSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPPP 11
+S ++P+S PRYAPPDPTLP PWR LIDG+T YLY+WNPETKVTQYERPV+ P P
Sbjct: 2 ASSASAPASTGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYERPVAAVPAP 59
>ref|NP_001183594.1| uncharacterized protein LOC100502188 [Zea mays]
gi|238013292|gb|ACR37681.1| unknown [Zea mays]
Length = 131
Score = 96.7 bits (239), Expect = 3e-18
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = -3
Query: 184 SSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPPP 11
+S ++P+S PRYAPPDPTLP PWR LIDG+T YLY+WNPETKVTQYERPV+ P P
Sbjct: 2 ASSASAPASTGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYERPVAAVPAP 59
>ref|XP_002455105.1| hypothetical protein SORBIDRAFT_03g004420 [Sorghum bicolor]
gi|241927080|gb|EES00225.1| hypothetical protein
SORBIDRAFT_03g004420 [Sorghum bicolor]
Length = 673
Score = 96.3 bits (238), Expect = 4e-18
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = -3
Query: 181 SVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDP 17
S ++P+SK PRYAPPDPTLP PWR LIDG+T YLY+WNPETKVTQYERPV+ P
Sbjct: 3 SSASAPASKGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYERPVAAVP 57
>ref|NP_001168054.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays] gi|223945725|gb|ACN26946.1| unknown [Zea mays]
gi|414876118|tpg|DAA53249.1| TPA: putative DEAD-box
ATP-dependent RNA helicase family protein [Zea mays]
Length = 672
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 2/60 (3%)
Frame = -3
Query: 184 SSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDP--PP 11
+S ++P+S PRYAPPDPTLP PWR LIDG+T YLY+WNPETKVTQYERPV+ P PP
Sbjct: 2 TSSASAPASNGPRYAPPDPTLPKPWRGLIDGNTGYLYFWNPETKVTQYERPVAAVPNSPP 61
>ref|XP_002884587.1| hypothetical protein ARALYDRAFT_477953 [Arabidopsis lyrata subsp.
lyrata] gi|297330427|gb|EFH60846.1| hypothetical protein
ARALYDRAFT_477953 [Arabidopsis lyrata subsp. lyrata]
Length = 1097
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = -3
Query: 193 MATSSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
MAT+ +P+S PRYAP DPTLP PW+ LIDGST LYYWNPET VTQYERP + PP
Sbjct: 1 MATTEA--TPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERPSAPPPP 58
>gb|EXC20307.1| Shaggy-related protein kinase epsilon [Morus notabilis]
Length = 1931
Score = 88.2 bits (217), Expect = 1e-15
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = -3
Query: 151 PRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
PRYAP DPTLPSPWR L+DG T YLY+WNPET VTQYERP+ PP
Sbjct: 1087 PRYAPEDPTLPSPWRGLVDGKTGYLYFWNPETNVTQYERPIGSGPP 1132
>gb|EOY06862.1| DEAD box RNA helicase family protein isoform 2 [Theobroma cacao]
Length = 1158
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = -3
Query: 193 MATSSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
MAT+ +P++ PRYAP DPTLP PW+ LIDGST LYYWNPET VTQYERP S PP
Sbjct: 1 MATAEA--APATLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYERPASLPPP 58
>gb|EOY06861.1| DEAD box RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 1070
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/60 (66%), Positives = 45/60 (75%)
Frame = -3
Query: 193 MATSSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
MAT+ +P++ PRYAP DPTLP PW+ LIDGST LYYWNPET VTQYERP S PP
Sbjct: 1 MATAEA--APATLGPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNVTQYERPASLPPP 58
>ref|XP_003565397.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 14-like
[Brachypodium distachyon]
Length = 655
Score = 88.2 bits (217), Expect = 1e-15
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3
Query: 163 SSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
SS PRYAPPDPTLP PWR LIDG+T YLY+WNPETK QY+RP PP
Sbjct: 3 SSAGPRYAPPDPTLPKPWRGLIDGTTGYLYFWNPETKAVQYDRPTGPPPP 52
>ref|XP_006407941.1| hypothetical protein EUTSA_v10019956mg [Eutrema salsugineum]
gi|557109087|gb|ESQ49394.1| hypothetical protein
EUTSA_v10019956mg [Eutrema salsugineum]
Length = 1077
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/60 (65%), Positives = 45/60 (75%)
Frame = -3
Query: 193 MATSSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
MAT+ +P+S PRYAP DPTLP PW+ LIDGST LYYWNPET +TQYERP + PP
Sbjct: 1 MATTEA--APASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNITQYERPSAPAPP 58
>ref|NP_187299.1| DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana]
gi|75313790|sp|Q9SQV1.1|RH40_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 40
gi|6437557|gb|AAF08584.1|AC011623_17 putative RNA
helicase [Arabidopsis thaliana]
gi|332640879|gb|AEE74400.1| DEAD-box ATP-dependent RNA
helicase 40 [Arabidopsis thaliana]
Length = 1088
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/61 (67%), Positives = 47/61 (77%)
Frame = -3
Query: 193 MATSSVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
MAT+ ++P+S PRYAP DPTLP PW+ LIDGST LYYWNPET VTQYERP + PP
Sbjct: 1 MATTE--DTPASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYERPSA--PP 56
Query: 13 P 11
P
Sbjct: 57 P 57
>gb|EPS66944.1| hypothetical protein M569_07831 [Genlisea aurea]
Length = 111
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/56 (67%), Positives = 41/56 (73%)
Frame = -3
Query: 181 SVPNSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
S S S+ PRYAP DPTLP PW+ LIDGST +YYWNPET VTQYERP S PP
Sbjct: 3 SAEQSSSNLGPRYAPDDPTLPEPWKGLIDGSTGLMYYWNPETNVTQYERPASFTPP 58
>ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cucumis
sativus]
Length = 1127
Score = 87.0 bits (214), Expect = 2e-15
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = -3
Query: 172 NSPSSKRPRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSEDPP 14
++P S PRYAP DPTLP PW+ LIDGS+ LYYWNPET VTQYE+PVS PP
Sbjct: 6 SAPPSLGPRYAPDDPTLPKPWKGLIDGSSGLLYYWNPETNVTQYEKPVSLPPP 58
>tpg|DAA59016.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 711
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/54 (70%), Positives = 41/54 (75%), Gaps = 5/54 (9%)
Frame = -3
Query: 151 PRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSED-----PPPTL 5
PRYAP DPTLP PWR L+DG+T YLYYWNPET VTQYERPV + PPP L
Sbjct: 13 PRYAPDDPTLPKPWRGLVDGTTGYLYYWNPETNVTQYERPVPPESQLLPPPPPL 66
>tpg|DAA59017.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 802
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/54 (70%), Positives = 41/54 (75%), Gaps = 5/54 (9%)
Frame = -3
Query: 151 PRYAPPDPTLPSPWRALIDGSTDYLYYWNPETKVTQYERPVSED-----PPPTL 5
PRYAP DPTLP PWR L+DG+T YLYYWNPET VTQYERPV + PPP L
Sbjct: 13 PRYAPDDPTLPKPWRGLVDGTTGYLYYWNPETNVTQYERPVPPESQLLPPPPPL 66