BLASTX nr result
ID: Zingiber24_contig00045923
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045923
(295 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305453.1| PREDICTED: pentatricopeptide repeat-containi... 141 8e-32
gb|ESW30891.1| hypothetical protein PHAVU_002G191000g [Phaseolus... 138 9e-31
ref|XP_006446832.1| hypothetical protein CICLE_v10018004mg [Citr... 137 1e-30
ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_006468978.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi... 136 3e-30
gb|EXB92378.1| hypothetical protein L484_021362 [Morus notabilis] 135 6e-30
ref|XP_002322810.2| hypothetical protein POPTR_0016s07590g [Popu... 135 6e-30
gb|EOX99930.1| Pentatricopeptide repeat-containing protein [Theo... 135 6e-30
emb|CBI22025.3| unnamed protein product [Vitis vinifera] 135 7e-30
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi... 135 7e-30
ref|XP_004504670.1| PREDICTED: pentatricopeptide repeat-containi... 133 3e-29
ref|XP_004243267.1| PREDICTED: pentatricopeptide repeat-containi... 133 3e-29
ref|XP_006411375.1| hypothetical protein EUTSA_v10017967mg [Eutr... 132 4e-29
ref|XP_002879907.1| pentatricopeptide repeat-containing protein ... 132 4e-29
ref|XP_006293459.1| hypothetical protein CARUB_v10022804mg [Caps... 132 6e-29
ref|XP_006348896.1| PREDICTED: pentatricopeptide repeat-containi... 131 1e-28
sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-c... 131 1e-28
gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana] 131 1e-28
ref|NP_850342.1| pentatricopeptide repeat-containing protein [Ar... 131 1e-28
>ref|XP_004305453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Fragaria vesca subsp. vesca]
Length = 641
Score = 141 bits (356), Expect = 8e-32
Identities = 65/97 (67%), Positives = 81/97 (83%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
ED+ F E + +D+VLWSS+I+AYGFHGRGEEAIKLF +M EG + ++VTFLSLLYAC
Sbjct: 321 EDALKAFWECEGADVVLWSSVISAYGFHGRGEEAIKLFEQMEQEGFEANDVTFLSLLYAC 380
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH G+K+KG E F+LM+QKYGL P L+HYTC+VDLLG
Sbjct: 381 SHCGMKEKGLELFDLMVQKYGLIPKLEHYTCVVDLLG 417
>gb|ESW30891.1| hypothetical protein PHAVU_002G191000g [Phaseolus vulgaris]
Length = 673
Score = 138 bits (347), Expect = 9e-31
Identities = 65/97 (67%), Positives = 78/97 (80%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
++S F E D+VLWSSMIAAYGFHG+GEEAIKLFN+M E +EVTFLSLLYAC
Sbjct: 353 QESFKSFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNQMEQENQPVNEVTFLSLLYAC 412
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH GLKDKG ++F++M++KYGL LKHYTC+VDLLG
Sbjct: 413 SHCGLKDKGLDFFDMMVKKYGLGARLKHYTCVVDLLG 449
>ref|XP_006446832.1| hypothetical protein CICLE_v10018004mg [Citrus clementina]
gi|557549443|gb|ESR60072.1| hypothetical protein
CICLE_v10018004mg [Citrus clementina]
Length = 632
Score = 137 bits (346), Expect = 1e-30
Identities = 63/97 (64%), Positives = 80/97 (82%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
+DS F E + SD+VLWSSMIAAYGFHG+GEEAI LF +M + + ++VTF+SLLYAC
Sbjct: 312 DDSMKAFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 371
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH GLK+KG E+F+LM++KYGL P L+HYTC+VDLLG
Sbjct: 372 SHCGLKEKGMEFFDLMVKKYGLKPRLEHYTCVVDLLG 408
>ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 137 bits (345), Expect = 2e-30
Identities = 64/97 (65%), Positives = 80/97 (82%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
EDS F + + D+VLWSSMIAAYGFHGRGEEA++LF++M + +EVTFLSLLYAC
Sbjct: 347 EDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYAC 406
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SHSGLK+KG EYF+LM++KY L P ++HYTC+VDLLG
Sbjct: 407 SHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLG 443
>ref|XP_006468978.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like isoform X1 [Citrus sinensis]
gi|568829336|ref|XP_006468979.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g41080-like isoform X2 [Citrus sinensis]
Length = 654
Score = 137 bits (344), Expect = 2e-30
Identities = 63/97 (64%), Positives = 79/97 (81%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
+DS F E + SD+VLWSSMIAAYGFHG+GEEAI LF +M + + ++VTF+SLLYAC
Sbjct: 334 DDSMKAFLECEYSDVVLWSSMIAAYGFHGKGEEAINLFEQMEQKEFEANDVTFVSLLYAC 393
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH GLK+KG E+F LM++KYGL P L+HYTC+VDLLG
Sbjct: 394 SHCGLKEKGMEFFNLMVKKYGLKPRLEHYTCVVDLLG 430
>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 136 bits (342), Expect = 3e-30
Identities = 65/97 (67%), Positives = 76/97 (78%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
+DS F E D+VLWSSMIAAYGFHG+GEEAIKLFNEM E +E+TFLSLLYAC
Sbjct: 354 QDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYAC 413
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH GLKDKG F++M++KYGL L+HYTC+VDLLG
Sbjct: 414 SHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLG 450
>gb|EXB92378.1| hypothetical protein L484_021362 [Morus notabilis]
Length = 673
Score = 135 bits (340), Expect = 6e-30
Identities = 63/96 (65%), Positives = 76/96 (79%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
EDS +F ES++ D VLWSSMIAAYGFHGRGEEAIKLF M EG + +V FLSLLYAC
Sbjct: 353 EDSVKVFVESESMDPVLWSSMIAAYGFHGRGEEAIKLFERMEEEGMEADDVAFLSLLYAC 412
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLL 6
SH GL++KG E+F+LM+ +YGL P +HY C+VDLL
Sbjct: 413 SHCGLREKGLEFFDLMVGRYGLKPRREHYACIVDLL 448
>ref|XP_002322810.2| hypothetical protein POPTR_0016s07590g [Populus trichocarpa]
gi|550321057|gb|EEF04571.2| hypothetical protein
POPTR_0016s07590g [Populus trichocarpa]
Length = 670
Score = 135 bits (340), Expect = 6e-30
Identities = 63/97 (64%), Positives = 77/97 (79%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
EDS + + D VLWSSMIAAYGFHGRGEEA+ LF +M EG ++VTFLSLLYAC
Sbjct: 350 EDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYAC 409
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH+GLK+KG +F+LM++KYGL P L+HYTC+VDLLG
Sbjct: 410 SHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLG 446
>gb|EOX99930.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
Length = 672
Score = 135 bits (340), Expect = 6e-30
Identities = 63/96 (65%), Positives = 76/96 (79%)
Frame = -3
Query: 290 DSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYACS 111
DS IF E + DLV+WSSMIAAYGFHGRG EA++LF ++ E P++VTFLSLLYACS
Sbjct: 353 DSIKIFLECEEPDLVVWSSMIAAYGFHGRGVEAVELFEQIEQEELGPNDVTFLSLLYACS 412
Query: 110 HSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
H G KDKG E+F LM +KYG+ P L+HYTC+VDLLG
Sbjct: 413 HCGFKDKGLEFFNLMTEKYGVKPRLEHYTCVVDLLG 448
>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 135 bits (339), Expect = 7e-30
Identities = 63/97 (64%), Positives = 78/97 (80%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
E S +F E + D+V WSSMIAAYGFHGRG EAI LFN+M E + ++VTFLSLLYAC
Sbjct: 337 EYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYAC 396
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH GLK+KG ++F+LM++KYG+ P L+HYTCMVDLLG
Sbjct: 397 SHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLG 433
>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 135 bits (339), Expect = 7e-30
Identities = 63/97 (64%), Positives = 78/97 (80%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
E S +F E + D+V WSSMIAAYGFHGRG EAI LFN+M E + ++VTFLSLLYAC
Sbjct: 337 EYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYAC 396
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH GLK+KG ++F+LM++KYG+ P L+HYTCMVDLLG
Sbjct: 397 SHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLG 433
>ref|XP_004504670.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cicer arietinum]
Length = 683
Score = 133 bits (334), Expect = 3e-29
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
EDS F E + D+VLWSSMIAAYG HG+GE+AIKLFNEM E +EVTFLSLLYAC
Sbjct: 363 EDSIKAFLECEERDVVLWSSMIAAYGCHGQGEKAIKLFNEMEQENLAGNEVTFLSLLYAC 422
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SH GLKDKG ++F++M++K GL L+HYTC+VDLLG
Sbjct: 423 SHCGLKDKGLDFFDMMVKKCGLKARLEHYTCVVDLLG 459
>ref|XP_004243267.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Solanum lycopersicum]
Length = 658
Score = 133 bits (334), Expect = 3e-29
Identities = 58/97 (59%), Positives = 78/97 (80%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
+++ IF E +DLVLWS+MI+AYGFHGRG+ A++LF+ M EG P+ +T LSLLYAC
Sbjct: 338 DEAEKIFEERKEADLVLWSAMISAYGFHGRGKNAVELFHRMEQEGLAPNHITLLSLLYAC 397
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SHSG+KD+G E+F+LM++KY + P L HYTC+VDLLG
Sbjct: 398 SHSGMKDEGLEFFDLMVEKYNVEPQLVHYTCVVDLLG 434
>ref|XP_006411375.1| hypothetical protein EUTSA_v10017967mg [Eutrema salsugineum]
gi|557112544|gb|ESQ52828.1| hypothetical protein
EUTSA_v10017967mg [Eutrema salsugineum]
Length = 650
Score = 132 bits (333), Expect = 4e-29
Identities = 64/99 (64%), Positives = 80/99 (80%), Gaps = 2/99 (2%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDP--SEVTFLSLLY 120
ED++ FSE + D V+WSSMI+AYGFHG+G EA+KLF+ M+ E TD +EV FL+LLY
Sbjct: 329 EDAAKAFSEREDEDEVMWSSMISAYGFHGQGGEAVKLFDTMV-EKTDMEINEVAFLNLLY 387
Query: 119 ACSHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
ACSHSGLKDKG E F++M++KYG P LKHYTC+VDLLG
Sbjct: 388 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 426
>ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325746|gb|EFH56166.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 565
Score = 132 bits (333), Expect = 4e-29
Identities = 62/97 (63%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Frame = -3
Query: 290 DSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGT-DPSEVTFLSLLYAC 114
D++ FSE + D V+WSSMI+AYGFHG+G+EAIKLFN M + + +EV FL+LLYAC
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYAC 304
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SHSGLKDKG E F++M++KYG P LKHYTC+VDLLG
Sbjct: 305 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 341
>ref|XP_006293459.1| hypothetical protein CARUB_v10022804mg [Capsella rubella]
gi|482562167|gb|EOA26357.1| hypothetical protein
CARUB_v10022804mg [Capsella rubella]
Length = 650
Score = 132 bits (331), Expect = 6e-29
Identities = 62/98 (63%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGT-DPSEVTFLSLLYA 117
ED++ FSE D V+WSSMI+AYGFHG G+EAIKLFN M+ + + +EV FL+LLYA
Sbjct: 329 EDAAKAFSERIDEDEVMWSSMISAYGFHGHGDEAIKLFNTMVEQTEMEINEVAFLNLLYA 388
Query: 116 CSHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
CSHSGL+DKG E F++M++KYG P LKHYTC+VDLLG
Sbjct: 389 CSHSGLRDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 426
>ref|XP_006348896.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Solanum tuberosum]
Length = 658
Score = 131 bits (329), Expect = 1e-28
Identities = 56/97 (57%), Positives = 78/97 (80%)
Frame = -3
Query: 293 EDSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGEGTDPSEVTFLSLLYAC 114
+++ IF E + +D+VLWS+MI+AYGFHG G+ A++LF+ M EG P+ +T LSLLYAC
Sbjct: 338 DEAEKIFEEREEADIVLWSAMISAYGFHGMGKNAVELFHRMEQEGLAPNHITLLSLLYAC 397
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SHSG+KD+G E+F+LM++KY + P L HYTC+VDLLG
Sbjct: 398 SHSGMKDEGLEFFDLMVEKYNVEPQLVHYTCVVDLLG 434
>sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
Length = 650
Score = 131 bits (329), Expect = 1e-28
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Frame = -3
Query: 290 DSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGE-GTDPSEVTFLSLLYAC 114
D++ FSE + D V+WSSMI+AYGFHG+G+EAI+LFN M + + +EV FL+LLYAC
Sbjct: 330 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 389
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SHSGLKDKG E F++M++KYG P LKHYTC+VDLLG
Sbjct: 390 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 426
>gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
Length = 563
Score = 131 bits (329), Expect = 1e-28
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Frame = -3
Query: 290 DSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGE-GTDPSEVTFLSLLYAC 114
D++ FSE + D V+WSSMI+AYGFHG+G+EAI+LFN M + + +EV FL+LLYAC
Sbjct: 243 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 302
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SHSGLKDKG E F++M++KYG P LKHYTC+VDLLG
Sbjct: 303 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 339
>ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15
[Arabidopsis thaliana] gi|330254831|gb|AEC09925.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 565
Score = 131 bits (329), Expect = 1e-28
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Frame = -3
Query: 290 DSSTIFSESDASDLVLWSSMIAAYGFHGRGEEAIKLFNEMIGE-GTDPSEVTFLSLLYAC 114
D++ FSE + D V+WSSMI+AYGFHG+G+EAI+LFN M + + +EV FL+LLYAC
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 304
Query: 113 SHSGLKDKGREYFELMIQKYGLAPNLKHYTCMVDLLG 3
SHSGLKDKG E F++M++KYG P LKHYTC+VDLLG
Sbjct: 305 SHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLG 341