BLASTX nr result
ID: Zingiber24_contig00045888
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045888
(274 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006643778.1| PREDICTED: E3 ubiquitin-protein ligase Arkad... 82 6e-14
gb|EMS64963.1| E3 ubiquitin ligase BIG BROTHER-related protein [... 82 6e-14
dbj|BAA96760.1| putative C-terminal zinc-finger [Oryza sativa Ja... 80 2e-13
gb|EOY18604.1| RING/U-box domain-containing protein, putative is... 80 2e-13
ref|NP_001042083.1| Os01g0159300 [Oryza sativa Japonica Group] g... 80 2e-13
ref|XP_002519554.1| protein binding protein, putative [Ricinus c... 80 4e-13
gb|EXC16241.1| E3 ubiquitin ligase BIG BROTHER-related protein [... 79 5e-13
ref|XP_006850588.1| hypothetical protein AMTR_s00034p00079510 [A... 79 6e-13
ref|XP_002881492.1| zinc finger family protein [Arabidopsis lyra... 79 6e-13
tpg|DAA53379.1| TPA: putative RING zinc finger domain superfamil... 78 1e-12
tpg|DAA53378.1| TPA: putative RING zinc finger domain superfamil... 78 1e-12
ref|XP_003568859.1| PREDICTED: uncharacterized protein LOC100829... 78 1e-12
ref|XP_003563478.1| PREDICTED: uncharacterized protein LOC100835... 78 1e-12
gb|AEX12881.1| hypothetical protein CL1032Contig1_02 [Pinus taeda] 77 2e-12
ref|NP_001189695.1| RING-finger domain-containing protein [Arabi... 77 2e-12
dbj|BAJ85397.1| predicted protein [Hordeum vulgare subsp. vulgare] 77 2e-12
ref|NP_850278.1| RING-finger domain-containing protein [Arabidop... 77 2e-12
gb|EMT27131.1| E3 ubiquitin-protein ligase RLIM [Aegilops tauschii] 77 2e-12
gb|EMT24701.1| RING finger protein 44 [Aegilops tauschii] 77 2e-12
ref|XP_006378757.1| hypothetical protein POPTR_0010s22750g [Popu... 77 3e-12
>ref|XP_006643778.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform X1
[Oryza brachyantha] gi|573912127|ref|XP_006643779.1|
PREDICTED: E3 ubiquitin-protein ligase Arkadia-like
isoform X2 [Oryza brachyantha]
Length = 502
Score = 82.4 bits (202), Expect = 6e-14
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPAS 157
QD+GKCA+CLEEY DN LG LKC HD+H CI WLK KN CPIC+ A+
Sbjct: 452 QDDGKCAICLEEYKDNSLLGILKCNHDFHTDCIKQWLKVKNSCPICKAAAA 502
>gb|EMS64963.1| E3 ubiquitin ligase BIG BROTHER-related protein [Triticum urartu]
Length = 580
Score = 82.4 bits (202), Expect = 6e-14
Identities = 32/61 (52%), Positives = 47/61 (77%), Gaps = 3/61 (4%)
Frame = +2
Query: 2 IQDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICR---VPASTDASD 172
+ D+ KC++C EEY ++E++GR+KC H YH+CCI WL+ KN CPIC+ VP+ +DA+D
Sbjct: 517 VVDDVKCSICQEEYIEDEEVGRMKCEHQYHVCCIQEWLRQKNWCPICKASAVPSLSDAAD 576
Query: 173 K 175
K
Sbjct: 577 K 577
>dbj|BAA96760.1| putative C-terminal zinc-finger [Oryza sativa Japonica Group]
gi|9757680|dbj|BAB08199.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218187559|gb|EEC69986.1| hypothetical protein
OsI_00495 [Oryza sativa Indica Group]
gi|222617777|gb|EEE53909.1| hypothetical protein
OsJ_00461 [Oryza sativa Japonica Group]
Length = 488
Score = 80.5 bits (197), Expect = 2e-13
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPAS 157
QD+GKCA+CLEEY DN LG LKC HD+H C+ WLK KN CPIC+ A+
Sbjct: 438 QDDGKCAICLEEYKDNSLLGILKCNHDFHTDCVKKWLKEKNSCPICKSAAA 488
>gb|EOY18604.1| RING/U-box domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508726708|gb|EOY18605.1| RING/U-box
domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508726709|gb|EOY18606.1| RING/U-box
domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508726710|gb|EOY18607.1| RING/U-box
domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508726711|gb|EOY18608.1| RING/U-box
domain-containing protein, putative isoform 1 [Theobroma
cacao]
Length = 550
Score = 80.5 bits (197), Expect = 2e-13
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPASTDAS 169
Q E CA+CLEEY + + +G ++CGHDYH+ CI WL KN CPIC+ PA D S
Sbjct: 493 QHEATCAICLEEYKNGDGIGMMRCGHDYHLLCIKRWLAVKNACPICKAPALADGS 547
>ref|NP_001042083.1| Os01g0159300 [Oryza sativa Japonica Group]
gi|113531614|dbj|BAF03997.1| Os01g0159300 [Oryza sativa
Japonica Group] gi|215707150|dbj|BAG93610.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|347737071|gb|AEP20518.1| zinc finger protein [Oryza
sativa Japonica Group]
Length = 501
Score = 80.5 bits (197), Expect = 2e-13
Identities = 32/51 (62%), Positives = 38/51 (74%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPAS 157
QD+GKCA+CLEEY DN LG LKC HD+H C+ WLK KN CPIC+ A+
Sbjct: 451 QDDGKCAICLEEYKDNSLLGILKCNHDFHTDCVKKWLKEKNSCPICKSAAA 501
>ref|XP_002519554.1| protein binding protein, putative [Ricinus communis]
gi|223541417|gb|EEF42968.1| protein binding protein,
putative [Ricinus communis]
Length = 547
Score = 79.7 bits (195), Expect = 4e-13
Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLK-CGHDYHICCISHWLKTKNICPICRVPASTD 163
QDEG C +CLEEY D + +G LK CGHDYH+ CI WL KN+CPIC+ A D
Sbjct: 490 QDEGNCVICLEEYKDMDDVGSLKACGHDYHVSCIKKWLSMKNLCPICKASAMAD 543
>gb|EXC16241.1| E3 ubiquitin ligase BIG BROTHER-related protein [Morus notabilis]
Length = 539
Score = 79.3 bits (194), Expect = 5e-13
Identities = 32/55 (58%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +2
Query: 2 IQDEGKCAVCLEEYDDNEKLGRLK-CGHDYHICCISHWLKTKNICPICRVPASTD 163
IQ+EG C +CLEEY + + +G LK CGHDYH+ CI WL KN+CPIC+ PA D
Sbjct: 484 IQEEGTCVICLEEYKNMDDVGSLKTCGHDYHVNCIKKWLSMKNLCPICKAPALAD 538
>ref|XP_006850588.1| hypothetical protein AMTR_s00034p00079510 [Amborella trichopoda]
gi|548854257|gb|ERN12169.1| hypothetical protein
AMTR_s00034p00079510 [Amborella trichopoda]
Length = 574
Score = 79.0 bits (193), Expect = 6e-13
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +2
Query: 8 DEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPASTD 163
+EG C +C EEY++ E++G L CGH+YHI CI WL KN+CP+C+ PA D
Sbjct: 517 EEGNCIICQEEYEEKEEVGTLDCGHEYHISCIKKWLVQKNVCPVCKAPALAD 568
>ref|XP_002881492.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297327331|gb|EFH57751.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 545
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLK-CGHDYHICCISHWLKTKNICPICRVPASTDAS 169
+D+ KCA+CLEEY + E+LG +K CGHDYH CI WL KN CPIC+ PA DAS
Sbjct: 486 EDQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPALPDAS 541
>tpg|DAA53379.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 468
Score = 77.8 bits (190), Expect = 1e-12
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPAS 157
QD+G CA+CLE+Y D E LG LKC HD+H CI WL+TKN CP+C+ A+
Sbjct: 418 QDDGSCAICLEDYRDKEALGILKCRHDFHAGCIKKWLQTKNSCPVCKAAAA 468
>tpg|DAA53378.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 521
Score = 77.8 bits (190), Expect = 1e-12
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPAS 157
QD+G CA+CLE+Y D E LG LKC HD+H CI WL+TKN CP+C+ A+
Sbjct: 471 QDDGSCAICLEDYRDKEALGILKCRHDFHAGCIKKWLQTKNSCPVCKAAAA 521
>ref|XP_003568859.1| PREDICTED: uncharacterized protein LOC100829493 [Brachypodium
distachyon]
Length = 538
Score = 77.8 bits (190), Expect = 1e-12
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPASTDAS 169
QD +C +CLEEY LGRLKCGHD+H CI WL+ KN CP+C+ A+ D +
Sbjct: 484 QDNERCVICLEEYGHKVSLGRLKCGHDFHASCIKKWLEVKNACPVCKADATNDTT 538
>ref|XP_003563478.1| PREDICTED: uncharacterized protein LOC100835307 [Brachypodium
distachyon]
Length = 588
Score = 77.8 bits (190), Expect = 1e-12
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +2
Query: 2 IQDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPASTDASDK 175
+ D+ KC++C EEY ++E++GR+KC H YH+CCI WL+ KN CPIC+ A DK
Sbjct: 528 VLDDIKCSICQEEYIEDEEVGRMKCEHQYHVCCIKEWLRQKNWCPICKASALCSDMDK 585
>gb|AEX12881.1| hypothetical protein CL1032Contig1_02 [Pinus taeda]
Length = 104
Score = 77.4 bits (189), Expect = 2e-12
Identities = 26/47 (55%), Positives = 38/47 (80%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICR 145
++E KC++C EEY+ N++LG+L+CGH YH+CCI WL KN CP+C+
Sbjct: 54 ENERKCSICQEEYEANDELGKLQCGHSYHVCCIKQWLLQKNACPVCK 100
>ref|NP_001189695.1| RING-finger domain-containing protein [Arabidopsis thaliana]
gi|330254265|gb|AEC09359.1| RING-finger
domain-containing protein [Arabidopsis thaliana]
Length = 599
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLK-CGHDYHICCISHWLKTKNICPICRVPASTDAS 169
+++ KCA+CLEEY + E+LG +K CGHDYH CI WL KN CPIC+ PA DAS
Sbjct: 540 EEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPALPDAS 595
>dbj|BAJ85397.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 77.4 bits (189), Expect = 2e-12
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPAS 157
+D+G+C VCLEEY DN+ LG LKC HD+H CI WL+ KN+CP+C+ A+
Sbjct: 424 EDDGRCLVCLEEYKDNDLLGVLKCRHDFHTDCIKKWLQVKNVCPVCKSAAA 474
>ref|NP_850278.1| RING-finger domain-containing protein [Arabidopsis thaliana]
gi|42571089|ref|NP_973618.1| RING-finger
domain-containing protein [Arabidopsis thaliana]
gi|17979426|gb|AAL49855.1| putative protein with
C-terminal RING finger [Arabidopsis thaliana]
gi|20465671|gb|AAM20304.1| putative protein with
C-terminal RING finger [Arabidopsis thaliana]
gi|330254263|gb|AEC09357.1| RING-finger
domain-containing protein [Arabidopsis thaliana]
gi|330254264|gb|AEC09358.1| RING-finger
domain-containing protein [Arabidopsis thaliana]
Length = 546
Score = 77.4 bits (189), Expect = 2e-12
Identities = 33/56 (58%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLK-CGHDYHICCISHWLKTKNICPICRVPASTDAS 169
+++ KCA+CLEEY + E+LG +K CGHDYH CI WL KN CPIC+ PA DAS
Sbjct: 487 EEQRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSMKNSCPICKSPALPDAS 542
>gb|EMT27131.1| E3 ubiquitin-protein ligase RLIM [Aegilops tauschii]
Length = 591
Score = 77.0 bits (188), Expect = 2e-12
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Frame = +2
Query: 2 IQDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPA--STDA 166
+ D+ KC++C EEY ++E++GR+KC H YH+CCI WL+ KN CPIC+ A S+DA
Sbjct: 530 VVDDVKCSICQEEYIEDEEVGRMKCEHQYHVCCIQEWLRQKNWCPICKASAVPSSDA 586
>gb|EMT24701.1| RING finger protein 44 [Aegilops tauschii]
Length = 578
Score = 77.0 bits (188), Expect = 2e-12
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLKCGHDYHICCISHWLKTKNICPICRVPAS 157
+D+G+C VCLEEY DNE LG LKC HD+H CI WL+ KN CP+C+ A+
Sbjct: 528 EDDGRCLVCLEEYKDNELLGILKCRHDFHTDCIKKWLQVKNACPVCKSAAA 578
>ref|XP_006378757.1| hypothetical protein POPTR_0010s22750g [Populus trichocarpa]
gi|566192240|ref|XP_006378758.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|566192242|ref|XP_006378759.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|566192244|ref|XP_002316358.2| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|566192246|ref|XP_006378760.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|566192248|ref|XP_002316357.2| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|566192250|ref|XP_006378761.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|550330387|gb|ERP56554.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|550330388|gb|ERP56555.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|550330389|gb|ERP56556.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|550330390|gb|EEF02529.2| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|550330391|gb|ERP56557.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|550330392|gb|EEF02528.2| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
gi|550330393|gb|ERP56558.1| hypothetical protein
POPTR_0010s22750g [Populus trichocarpa]
Length = 545
Score = 76.6 bits (187), Expect = 3e-12
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +2
Query: 5 QDEGKCAVCLEEYDDNEKLGRLK-CGHDYHICCISHWLKTKNICPICRVPASTDASDK 175
Q+E CA+CLEEY +K+G ++ CGH YH+ CI WL KN+CPIC+ PA D S+K
Sbjct: 487 QEETSCAICLEEYKSMDKVGMIRNCGHVYHVDCIKKWLSMKNMCPICKAPAVADGSNK 544