BLASTX nr result
ID: Zingiber24_contig00045806
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045806
(316 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004984658.1| PREDICTED: pentatricopeptide repeat-containi... 147 1e-33
gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays] 145 5e-33
ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containi... 143 2e-32
ref|XP_006586917.1| PREDICTED: pentatricopeptide repeat-containi... 142 5e-32
ref|XP_006651297.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
gb|EMT31980.1| Pentatricopeptide repeat-containing protein [Aegi... 140 2e-31
ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera] 140 2e-31
dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas] 139 5e-31
ref|XP_006485076.1| PREDICTED: pentatricopeptide repeat-containi... 138 7e-31
ref|XP_006436971.1| hypothetical protein CICLE_v10033814mg [Citr... 138 7e-31
gb|ESW10918.1| hypothetical protein PHAVU_009G249300g [Phaseolus... 138 9e-31
gb|EOY22664.1| Tetratricopeptide repeat (TPR)-like superfamily p... 138 9e-31
gb|EOY22663.1| Tetratricopeptide repeat-like superfamily protein... 138 9e-31
ref|XP_002318784.2| hypothetical protein POPTR_0012s11110g [Popu... 137 1e-30
ref|XP_004300372.1| PREDICTED: pentatricopeptide repeat-containi... 132 4e-29
gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri] 131 8e-29
dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana] 130 2e-28
ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. l... 130 2e-28
ref|NP_199912.2| pentatricopeptide repeat-containing protein [Ar... 130 2e-28
>ref|XP_004984658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like isoform X1 [Setaria italica]
Length = 555
Score = 147 bits (372), Expect = 1e-33
Identities = 69/102 (67%), Positives = 79/102 (77%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL++R K+EG+ P+TELV+ DV HSEKLA+AY VLKT GTEI VSKNLQ
Sbjct: 454 GLSKRAKVEGYAPLTELVTKDVSEEEREENLAFHSEKLAVAYSVLKTSPGTEIMVSKNLQ 513
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
TC DCHEWIKI+SKVL RVI++RDRIRFHRFE G CSC DYW
Sbjct: 514 TCSDCHEWIKIISKVLCRVIIMRDRIRFHRFESGRCSCKDYW 555
>gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]
Length = 555
Score = 145 bits (366), Expect = 5e-33
Identities = 67/102 (65%), Positives = 78/102 (76%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL +R K+EG+ P+TELV+ DV HSEKLA+AY VLKTG GTEI VSKNLQ
Sbjct: 454 GLCRRAKVEGYAPLTELVTKDVSEEEREENLTFHSEKLAVAYSVLKTGPGTEIMVSKNLQ 513
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCHEW+KI+SKVL RVI++RDR+RFHRFE G CSC DYW
Sbjct: 514 VCSDCHEWMKIISKVLCRVIILRDRVRFHRFESGWCSCKDYW 555
>ref|XP_003561711.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Brachypodium distachyon]
Length = 555
Score = 143 bits (361), Expect = 2e-32
Identities = 68/102 (66%), Positives = 76/102 (74%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL+++ K EG+ P TELV DV HSEKLA+AY VLKTG GTEI VSKNLQ
Sbjct: 454 GLSKKAKAEGYSPSTELVMKDVSHEEREENLTFHSEKLAVAYSVLKTGPGTEIMVSKNLQ 513
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
TC DCHEWIKI+SKVL RVI++RDR RFHRFE G CSC DYW
Sbjct: 514 TCGDCHEWIKIISKVLCRVIIMRDRARFHRFESGCCSCKDYW 555
>ref|XP_006586917.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 542
Score = 142 bits (358), Expect = 5e-32
Identities = 67/102 (65%), Positives = 77/102 (75%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL QR KLEGF P+T+LV MDV HSEKLA+AY VLKT GT+IR+SKNL+
Sbjct: 441 GLIQRAKLEGFTPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNLR 500
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIKIVSK+L+R I+VRDRIRFH+FE G CSC DYW
Sbjct: 501 ICLDCHNWIKIVSKILNRKIIVRDRIRFHQFEGGVCSCKDYW 542
>ref|XP_006651297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Oryza brachyantha]
Length = 555
Score = 140 bits (352), Expect = 2e-31
Identities = 65/101 (64%), Positives = 76/101 (75%)
Frame = +1
Query: 4 LTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQT 183
L+++ K G+ P+TELV DV HSEKLA+AYC+LKT GTEI VSKNLQT
Sbjct: 455 LSKKAKSVGYTPLTELVLKDVSEEEREENLTAHSEKLAVAYCILKTVPGTEIMVSKNLQT 514
Query: 184 CEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCHEW+KIVSKVL RVI++RDR+RFHRFE G CSC DYW
Sbjct: 515 CTDCHEWMKIVSKVLSRVIIMRDRVRFHRFEGGCCSCKDYW 555
>gb|EMT31980.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 781
Score = 140 bits (352), Expect = 2e-31
Identities = 65/102 (63%), Positives = 75/102 (73%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL ++ K EG+ P TELV+ DV HSEKLA+AY VLKTG GTEI VSKNLQ
Sbjct: 454 GLLKKAKAEGYTPSTELVTKDVSQEEREENLSFHSEKLAVAYSVLKTGPGTEILVSKNLQ 513
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCHEW+KI+SK L RVI++RDR+RFHRFE G CSC DYW
Sbjct: 514 ACGDCHEWMKIISKALCRVIIMRDRVRFHRFESGCCSCKDYW 555
>ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 140 bits (352), Expect = 2e-31
Identities = 66/102 (64%), Positives = 77/102 (75%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL +R KLEGF P T+LV MDV HSEKLA+AY +LKT GTEIRVSKNL+
Sbjct: 422 GLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLR 481
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
TC DCH W+KI+S++L RVI+VRDRIRFH+FE G CSC DYW
Sbjct: 482 TCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 523
>emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 140 bits (352), Expect = 2e-31
Identities = 66/102 (64%), Positives = 77/102 (75%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL +R KLEGF P T+LV MDV HSEKLA+AY +LKT GTEIRVSKNL+
Sbjct: 461 GLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLR 520
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
TC DCH W+KI+S++L RVI+VRDRIRFH+FE G CSC DYW
Sbjct: 521 TCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562
>dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 139 bits (349), Expect = 5e-31
Identities = 66/102 (64%), Positives = 75/102 (73%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL QR KLEGF P TELV MDV HSEKLA+AY +LKT GTEIR+ KNL+
Sbjct: 413 GLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLR 472
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK+VS +L RVI++RDRIRFHRFE G+CSC DYW
Sbjct: 473 ICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514
>ref|XP_006485076.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Citrus sinensis]
Length = 537
Score = 138 bits (348), Expect = 7e-31
Identities = 65/101 (64%), Positives = 74/101 (73%)
Frame = +1
Query: 4 LTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQT 183
L QR K EGF P TELV MDV HSEKLA+AY +LKT GTEIR+SKNL+
Sbjct: 437 LIQRTKSEGFLPATELVLMDVCEEEKEGNLYHHSEKLALAYGILKTSPGTEIRISKNLRI 496
Query: 184 CEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK++S++L RVI+VRDRIRFHRFE G CSC DYW
Sbjct: 497 CHDCHSWIKMISRLLRRVIIVRDRIRFHRFEGGLCSCGDYW 537
>ref|XP_006436971.1| hypothetical protein CICLE_v10033814mg [Citrus clementina]
gi|557539167|gb|ESR50211.1| hypothetical protein
CICLE_v10033814mg [Citrus clementina]
Length = 540
Score = 138 bits (348), Expect = 7e-31
Identities = 65/101 (64%), Positives = 74/101 (73%)
Frame = +1
Query: 4 LTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQT 183
L QR K EGF P TELV MDV HSEKLA+AY +LKT GTEIR+SKNL+
Sbjct: 440 LIQRTKSEGFLPATELVLMDVSEEEKEGNLYHHSEKLALAYGILKTSPGTEIRISKNLRI 499
Query: 184 CEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK++S++L RVI+VRDRIRFHRFE G CSC DYW
Sbjct: 500 CHDCHSWIKMISRLLRRVIIVRDRIRFHRFEGGLCSCGDYW 540
>gb|ESW10918.1| hypothetical protein PHAVU_009G249300g [Phaseolus vulgaris]
Length = 543
Score = 138 bits (347), Expect = 9e-31
Identities = 65/102 (63%), Positives = 76/102 (74%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL QR KLEGF P+T+LV MDV HSEKLA+AY VLK+ GT+IR+SKNL+
Sbjct: 442 GLIQRAKLEGFTPLTDLVLMDVSEEEKEENLTFHSEKLALAYGVLKSSPGTKIRISKNLR 501
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK VSK+L+R I+VRDRIRFH+FE G CSC DYW
Sbjct: 502 ICLDCHNWIKTVSKILNREIIVRDRIRFHQFEGGVCSCRDYW 543
>gb|EOY22664.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
[Theobroma cacao]
Length = 542
Score = 138 bits (347), Expect = 9e-31
Identities = 66/102 (64%), Positives = 75/102 (73%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL QR KL+GF P TELV MD+ HSEKLA+AY +LKT GTEI +SKNL+
Sbjct: 441 GLIQRTKLKGFLPETELVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGTEIMISKNLR 500
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK+VSK+L RVI+VRDRIRFHRFE G CSC DYW
Sbjct: 501 ICHDCHNWIKMVSKLLIRVIIVRDRIRFHRFEGGLCSCADYW 542
>gb|EOY22663.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 568
Score = 138 bits (347), Expect = 9e-31
Identities = 66/102 (64%), Positives = 75/102 (73%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL QR KL+GF P TELV MD+ HSEKLA+AY +LKT GTEI +SKNL+
Sbjct: 441 GLIQRTKLKGFLPETELVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGTEIMISKNLR 500
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK+VSK+L RVI+VRDRIRFHRFE G CSC DYW
Sbjct: 501 ICHDCHNWIKMVSKLLIRVIIVRDRIRFHRFEGGLCSCADYW 542
>ref|XP_002318784.2| hypothetical protein POPTR_0012s11110g [Populus trichocarpa]
gi|550326851|gb|EEE97004.2| hypothetical protein
POPTR_0012s11110g [Populus trichocarpa]
Length = 543
Score = 137 bits (346), Expect = 1e-30
Identities = 64/102 (62%), Positives = 75/102 (73%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL QR KL G+ P T+LV+MDV HSEKLA+AY +LKT G E+R+SKNL+
Sbjct: 442 GLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLR 501
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIKIVS++L RVI+VRDRIRFHRFE G CSC DYW
Sbjct: 502 ICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 543
>ref|XP_004300372.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Fragaria vesca subsp. vesca]
Length = 555
Score = 132 bits (333), Expect = 4e-29
Identities = 63/101 (62%), Positives = 74/101 (73%)
Frame = +1
Query: 4 LTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQT 183
L +R K EGF P+TELV MDV HSEKLA+AY +LKT GTEIR+SKNL+
Sbjct: 455 LIKRTKSEGFVPVTELVLMDVSEEEKEGNLNSHSEKLALAYGILKTSPGTEIRISKNLRI 514
Query: 184 CEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK+VS++L+RVI+VRDRIRFH FE G C C DYW
Sbjct: 515 CHDCHCWIKLVSRLLNRVIIVRDRIRFHHFEGGMCLCGDYW 555
>gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]
Length = 511
Score = 131 bits (330), Expect = 8e-29
Identities = 61/102 (59%), Positives = 73/102 (71%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL Q+ K EGF T+LV MDV HSEKLA+AY +LK+ GTEIR+ KN++
Sbjct: 410 GLIQKTKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIR 469
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK VSK+L+RVI++RDRIRFHRFE G CSC DYW
Sbjct: 470 MCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCKDYW 511
>dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
Length = 511
Score = 130 bits (327), Expect = 2e-28
Identities = 60/102 (58%), Positives = 73/102 (71%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL Q+ K +GF T+LV MDV HSEKLA+AY +LK+ GTEIR+ KN++
Sbjct: 410 GLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIR 469
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK VSK+L+RVI++RDRIRFHRFE G CSC DYW
Sbjct: 470 MCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 511
>ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297309925|gb|EFH40349.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 534
Score = 130 bits (327), Expect = 2e-28
Identities = 61/102 (59%), Positives = 72/102 (70%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL Q+ K EGF T+LV MDV HSEKLA+AY +LK+ GTEIR+ KN++
Sbjct: 433 GLIQKTKSEGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIR 492
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK VSK+L+RVI +RDRIRFHRFE G CSC DYW
Sbjct: 493 MCSDCHNWIKAVSKLLNRVITMRDRIRFHRFEDGLCSCKDYW 534
>ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g50990 gi|332008636|gb|AED96019.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 130 bits (327), Expect = 2e-28
Identities = 60/102 (58%), Positives = 73/102 (71%)
Frame = +1
Query: 1 GLTQRVKLEGFRPMTELVSMDVXXXXXXXXXXXHSEKLAIAYCVLKTGLGTEIRVSKNLQ 180
GL Q+ K +GF T+LV MDV HSEKLA+AY +LK+ GTEIR+ KN++
Sbjct: 433 GLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIR 492
Query: 181 TCEDCHEWIKIVSKVLHRVILVRDRIRFHRFEKGTCSCNDYW 306
C DCH WIK VSK+L+RVI++RDRIRFHRFE G CSC DYW
Sbjct: 493 MCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534