BLASTX nr result
ID: Zingiber24_contig00045504
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045504
(314 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 66 5e-09
ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containin... 65 7e-09
ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containin... 65 7e-09
ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containin... 65 7e-09
ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containin... 65 7e-09
gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus pe... 65 7e-09
ref|XP_004250919.1| PREDICTED: zinc finger CCCH domain-containin... 65 1e-08
ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containin... 65 1e-08
ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [A... 64 2e-08
gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Mo... 63 4e-08
ref|XP_002298292.2| hypothetical protein POPTR_0001s26250g [Popu... 62 8e-08
emb|CBI28414.3| unnamed protein product [Vitis vinifera] 62 1e-07
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 62 1e-07
gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Mo... 61 1e-07
ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containin... 61 2e-07
ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containin... 61 2e-07
ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containin... 61 2e-07
gb|EPS64223.1| hypothetical protein M569_10558, partial [Genlise... 59 7e-07
ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, part... 58 1e-06
gb|EOY32749.1| Zinc finger family protein / RNA recognition moti... 57 2e-06
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein,
putative [Ricinus communis]
Length = 578
Score = 65.9 bits (159), Expect = 5e-09
Identities = 39/94 (41%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQK+EPEN K+IGYLLL+ ++++E++ A PDN I SLI +AK+
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60
Query: 217 IALSRKANMA--LPMQLQFH--QDSQFRYMPSSP 306
+ L++ A A P Q+ D ++ P SP
Sbjct: 61 LGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSP 94
>ref|XP_006469504.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X4 [Citrus sinensis]
Length = 578
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQK+EPEN K+IGYLLL+ + +++++ A PD+ I SLINEAK
Sbjct: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
Query: 217 IALSRKANMALPMQLQFHQDSQFRYMPSSP 306
+ L K ++ P+ D ++ P SP
Sbjct: 61 LGLG-KPTVSPPISPASVADLPLQFAPFSP 89
>ref|XP_006469503.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X3 [Citrus sinensis]
Length = 579
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQK+EPEN K+IGYLLL+ + +++++ A PD+ I SLINEAK
Sbjct: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
Query: 217 IALSRKANMALPMQLQFHQDSQFRYMPSSP 306
+ L K ++ P+ D ++ P SP
Sbjct: 61 LGLG-KPTVSPPISPASVADLPLQFAPFSP 89
>ref|XP_006469502.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X2 [Citrus sinensis]
Length = 581
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQK+EPEN K+IGYLLL+ + +++++ A PD+ I SLINEAK
Sbjct: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
Query: 217 IALSRKANMALPMQLQFHQDSQFRYMPSSP 306
+ L K ++ P+ D ++ P SP
Sbjct: 61 LGLG-KPTVSPPISPASVADLPLQFAPFSP 89
>ref|XP_006469501.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
isoform X1 [Citrus sinensis]
Length = 582
Score = 65.5 bits (158), Expect = 7e-09
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQK+EPEN K+IGYLLL+ + +++++ A PD+ I SLINEAK
Sbjct: 1 MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMK 60
Query: 217 IALSRKANMALPMQLQFHQDSQFRYMPSSP 306
+ L K ++ P+ D ++ P SP
Sbjct: 61 LGLG-KPTVSPPISPASVADLPLQFAPFSP 89
>gb|EMJ16520.1| hypothetical protein PRUPE_ppa003564mg [Prunus persica]
Length = 565
Score = 65.5 bits (158), Expect = 7e-09
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQKIEPEN K+IGYLLL+ + +++++ A PDN I SLIN+AK
Sbjct: 1 MDFSESTKVVYNRIQKIEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLIQSLINKAKTE 60
Query: 217 IALSRKANMALPMQLQFHQ----DSQFRYMPSSP 306
+ L + A A Q +Q D ++ P +P
Sbjct: 61 LGLCKLAVSAPISPSQVNQVPVSDPPLQFTPYTP 94
>ref|XP_004250919.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform 2 [Solanum lycopersicum]
Length = 691
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V +RIQ ++PENA K++GY+L++ +KE++ A GP+ ++SLIN+AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 217 IALSRKANMALPMQLQFHQDSQFRYMPSS 303
+ +S + A+ FHQ S +P++
Sbjct: 61 LGISSNNSSAMSKLNLFHQSSPRIIIPNN 89
>ref|XP_004250918.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
isoform 1 [Solanum lycopersicum]
Length = 697
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V +RIQ ++PENA K++GY+L++ +KE++ A GP+ ++SLIN+AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 217 IALSRKANMALPMQLQFHQDSQFRYMPSS 303
+ +S + A+ FHQ S +P++
Sbjct: 61 LGISSNNSSAMSKLNLFHQSSPRIIIPNN 89
>ref|XP_006836760.1| hypothetical protein AMTR_s00088p00158600 [Amborella trichopoda]
gi|548839320|gb|ERM99613.1| hypothetical protein
AMTR_s00088p00158600 [Amborella trichopoda]
Length = 575
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/81 (43%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Frame = +1
Query: 67 VFNRIQKIEPENAMKLIGYLLLKYT-QKELLEFALGPDNHILSLINEAKAYIALSRKANM 243
VF+RIQK+EPEN K++GYLLL+ ++E+ E A+ PD+ I+SLIN+AK+ + L+ K +
Sbjct: 18 VFSRIQKLEPENVSKIVGYLLLRDNGEREMNELAVCPDSLIISLINKAKSELGLASKPQI 77
Query: 244 ALPM-QLQFHQDSQFRYMPSS 303
+ + Q F+ D + P S
Sbjct: 78 STQIPQNSFNSDLPLPFTPFS 98
>gb|EXC34884.1| Zinc finger CCCH domain-containing protein 18 [Morus notabilis]
Length = 557
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQK+EPEN K+IGYLLL+ + +++++ A PDN + SLI AK
Sbjct: 1 MDFSESTKIVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDNLMHSLITRAKTE 60
Query: 217 IALSRKANMALPM 255
+ LS K+ + P+
Sbjct: 61 LGLSSKSPVPAPI 73
>ref|XP_002298292.2| hypothetical protein POPTR_0001s26250g [Populus trichocarpa]
gi|550348221|gb|EEE83097.2| hypothetical protein
POPTR_0001s26250g [Populus trichocarpa]
Length = 636
Score = 62.0 bits (149), Expect = 8e-08
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E A+ VF+RIQ +EPENA K++GYLLL+ Y +KE++ FA GP+ + +LI AK
Sbjct: 1 MDSYEAANMVFSRIQNLEPENASKIMGYLLLQDYGEKEMIRFAFGPETLLHNLILYAKTQ 60
Query: 217 IA-LSRKAN 240
+ LS K +
Sbjct: 61 LGFLSNKTS 69
>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQK+EPEN K+IGYLLL+ + +++++ A DN I LIN+AKA
Sbjct: 14 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 73
Query: 217 IALSRKANMALPM 255
+ LS K ++ P+
Sbjct: 74 LGLSSKPAVSSPI 86
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Vitis vinifera]
Length = 572
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V+NRIQK+EPEN K+IGYLLL+ + +++++ A DN I LIN+AKA
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60
Query: 217 IALSRKANMALPM 255
+ LS K ++ P+
Sbjct: 61 LGLSSKPAVSSPI 73
>gb|EXB93337.1| Zinc finger CCCH domain-containing protein 46 [Morus notabilis]
Length = 563
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/68 (42%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E + VF+RIQ +EPENA K++GYLL++ Y +KE++ A GP++ + +LI +AK +
Sbjct: 1 MDSYEASRTVFSRIQSLEPENATKIMGYLLIQDYGEKEMIRLAFGPESLLHNLIIKAKTH 60
Query: 217 IALSRKAN 240
+A+ K++
Sbjct: 61 LAILPKSS 68
>ref|XP_006365193.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X3 [Solanum tuberosum]
Length = 692
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V +RIQ ++PENA K++GY+L++ +KE++ A GP+ ++SLIN+AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 217 IALSRKANMALPMQLQ---FHQDSQFRYMPSS 303
+ LS ++ A+ + FH S +P++
Sbjct: 61 LGLSSNSSSAMSNASKLNLFHHSSPRIMIPNN 92
>ref|XP_006365192.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X2 [Solanum tuberosum]
Length = 695
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V +RIQ ++PENA K++GY+L++ +KE++ A GP+ ++SLIN+AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 217 IALSRKANMALPMQLQ---FHQDSQFRYMPSS 303
+ LS ++ A+ + FH S +P++
Sbjct: 61 LGLSSNSSSAMSNASKLNLFHHSSPRIMIPNN 92
>ref|XP_006365191.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
isoform X1 [Solanum tuberosum]
Length = 701
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V +RIQ ++PENA K++GY+L++ +KE++ A GP+ ++SLIN+AK
Sbjct: 1 MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC 60
Query: 217 IALSRKANMALPMQLQ---FHQDSQFRYMPSS 303
+ LS ++ A+ + FH S +P++
Sbjct: 61 LGLSSNSSSAMSNASKLNLFHHSSPRIMIPNN 92
>gb|EPS64223.1| hypothetical protein M569_10558, partial [Genlisea aurea]
Length = 525
Score = 58.9 bits (141), Expect = 7e-07
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E V +RIQ ++PENA K++GY+L++ +KE++ A GP+ +LS IN+AKA
Sbjct: 1 MDSYEATKVVMSRIQTLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLLSCINQAKAC 60
Query: 217 IALS 228
+ LS
Sbjct: 61 LGLS 64
>ref|XP_002313352.2| hypothetical protein POPTR_0009s05520g, partial [Populus
trichocarpa] gi|550331093|gb|EEE87307.2| hypothetical
protein POPTR_0009s05520g, partial [Populus trichocarpa]
Length = 728
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E + VF+RIQ +EPENA K++GYLLL+ Y +KE++ A GP+ + +LI + K
Sbjct: 44 MDSYEATNIVFSRIQSLEPENASKIMGYLLLQDYGEKEMIRLAFGPETLLQNLILQTKTQ 103
Query: 217 I 219
+
Sbjct: 104 L 104
>gb|EOY32749.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 699
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Frame = +1
Query: 40 MEKLEVADFVFNRIQKIEPENAMKLIGYLLLK-YTQKELLEFALGPDNHILSLINEAKAY 216
M+ E VF+RIQ ++PENA K++GYLL++ + +KE++ A GP+ I SLI +AK +
Sbjct: 1 MDSYEATRIVFSRIQNLDPENASKIMGYLLIQDHGEKEMIRLAFGPEALIHSLILKAKTH 60
Query: 217 IALS 228
+ S
Sbjct: 61 LGFS 64