BLASTX nr result
ID: Zingiber24_contig00045502
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045502
(568 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AER45344.1| P2 [Fig badnavirus 1] gi|381144399|gb|AFF58904.1|... 93 5e-17
gb|AER42637.1| DNA-binding protein [Fig badnavirus 1] gi|3548322... 93 5e-17
gb|AER45360.1| P2 [Fig badnavirus 1] 92 7e-17
gb|AER45350.1| P2 [Fig badnavirus 1] gi|354990611|gb|AER45354.1|... 92 7e-17
ref|YP_006273074.1| hypothetical protein [Fig badnavirus 1] gi|3... 90 4e-16
gb|ACE74697.1| unknown [Citrus yellow mosaic virus] gi|198385720... 78 2e-12
ref|YP_009002584.1| hypothetical protein [Hibiscus bacilliform v... 77 3e-12
gb|AER00537.1| ORF II [Citrus yellow mosaic virus] gi|353453400|... 77 4e-12
gb|ACB87149.1| unknown [Citrus yellow mosaic virus] 76 5e-12
ref|YP_008567618.1| ORF2 [Piper yellow mottle virus] gi|54035746... 76 7e-12
gb|ACE76863.1| unknown [Citrus yellow mosaic virus] 75 1e-11
gb|ACE76857.1| unknown [Citrus yellow mosaic virus] 74 2e-11
gb|ACB87155.1| unknown [Citrus yellow mosaic virus] 74 2e-11
gb|ACO55657.1| unknown [Citrus yellow mosaic virus] 73 4e-11
ref|NP_569152.1| hypothetical protein CYMVgp2 [Citrus yellow mos... 73 6e-11
>gb|AER45344.1| P2 [Fig badnavirus 1] gi|381144399|gb|AFF58904.1| putative
DNA-binding protein [Fig badnavirus 1]
gi|381144402|gb|AFF58906.1| putative DNA-binding protein
[Fig badnavirus 1] gi|381144405|gb|AFF58908.1| putative
DNA-binding protein [Fig badnavirus 1]
Length = 135
Score = 92.8 bits (229), Expect = 5e-17
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Frame = -3
Query: 539 MNNYIISRNTSSYREVISATDPIESPSTGFAKPSDYQGTTPSXXXXXXXXXXXXXXXXXI 360
M++YI+S+ T+SY+E I AT+ IESP+ GF +P+D+QG T + I
Sbjct: 1 MSSYIVSQGTNSYKEAIKATEGIESPAAGFVRPADFQGGTSAARVQIKQNNTFIQLLIQI 60
Query: 359 AETLKEIQS----------TLQKQNPTPFPQDLIAKLQNLSISPSKPK--EKPGKLRVFK 216
AE+LK+I+ LQK ++L+ +LQ+LS+ + K EK G RVFK
Sbjct: 61 AESLKDIREEQRVLKEEVRQLQKDKAASITEELVERLQSLSLGVPEKKVAEKKGTFRVFK 120
Query: 215 DPYKILKEEQEKL 177
DP +IL+EE+EKL
Sbjct: 121 DPLRILEEEKEKL 133
>gb|AER42637.1| DNA-binding protein [Fig badnavirus 1] gi|354832281|gb|AER42639.1|
DNA-binding protein [Fig badnavirus 1]
gi|354832284|gb|AER42641.1| DNA-binding protein [Fig
badnavirus 1] gi|354832287|gb|AER42643.1| DNA-binding
protein [Fig badnavirus 1] gi|354832290|gb|AER42645.1|
DNA-binding protein [Fig badnavirus 1]
gi|354990563|gb|AER45322.1| P2 [Fig badnavirus 1]
gi|354990566|gb|AER45324.1| P2 [Fig badnavirus 1]
gi|354990569|gb|AER45326.1| P2 [Fig badnavirus 1]
gi|354990572|gb|AER45328.1| P2 [Fig badnavirus 1]
gi|354990575|gb|AER45330.1| P2 [Fig badnavirus 1]
gi|354990578|gb|AER45332.1| P2 [Fig badnavirus 1]
gi|354990581|gb|AER45334.1| P2 [Fig badnavirus 1]
gi|354990584|gb|AER45336.1| P2 [Fig badnavirus 1]
gi|354990587|gb|AER45338.1| P2 [Fig badnavirus 1]
gi|354990590|gb|AER45340.1| P2 [Fig badnavirus 1]
gi|354990593|gb|AER45342.1| P2 [Fig badnavirus 1]
gi|354990599|gb|AER45346.1| P2 [Fig badnavirus 1]
gi|354990602|gb|AER45348.1| P2 [Fig badnavirus 1]
gi|354990608|gb|AER45352.1| P2 [Fig badnavirus 1]
gi|354990614|gb|AER45356.1| P2 [Fig badnavirus 1]
gi|354990617|gb|AER45358.1| P2 [Fig badnavirus 1]
gi|354990623|gb|AER45362.1| P2 [Fig badnavirus 1]
gi|354990626|gb|AER45364.1| P2 [Fig badnavirus 1]
gi|354990629|gb|AER45366.1| P2 [Fig badnavirus 1]
gi|354990632|gb|AER45368.1| P2 [Fig badnavirus 1]
gi|354990635|gb|AER45370.1| P2 [Fig badnavirus 1]
gi|354990638|gb|AER45372.1| P2 [Fig badnavirus 1]
gi|354990641|gb|AER45374.1| P2 [Fig badnavirus 1]
gi|381144387|gb|AFF58896.1| putative DNA-binding protein
[Fig badnavirus 1] gi|381144390|gb|AFF58898.1| putative
DNA-binding protein [Fig badnavirus 1]
gi|381144393|gb|AFF58900.1| putative DNA-binding protein
[Fig badnavirus 1] gi|381144396|gb|AFF58902.1| putative
DNA-binding protein [Fig badnavirus 1]
gi|381144408|gb|AFF58910.1| putative DNA-binding protein
[Fig badnavirus 1] gi|381144411|gb|AFF58912.1| putative
DNA-binding protein [Fig badnavirus 1]
gi|381144414|gb|AFF58914.1| putative DNA-binding protein
[Fig badnavirus 1] gi|381144417|gb|AFF58916.1| putative
DNA-binding protein [Fig badnavirus 1]
Length = 135
Score = 92.8 bits (229), Expect = 5e-17
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Frame = -3
Query: 539 MNNYIISRNTSSYREVISATDPIESPSTGFAKPSDYQGTTPSXXXXXXXXXXXXXXXXXI 360
M++YI+S+ T+SY+E I AT+ IESP+ GF +P+D+QG T + I
Sbjct: 1 MSSYIVSQGTNSYKEAIKATEGIESPAAGFVRPADFQGGTSAARVQIKQNNTLIQLLIQI 60
Query: 359 AETLKEIQS----------TLQKQNPTPFPQDLIAKLQNLSISPSKPK--EKPGKLRVFK 216
AE+LK+I+ LQK ++L+ +LQ+LS+ + K EK G RVFK
Sbjct: 61 AESLKDIREEQRVLKEEVRQLQKDKAASITEELVERLQSLSLGVPEKKVAEKKGTFRVFK 120
Query: 215 DPYKILKEEQEKL 177
DP +IL+EE+EKL
Sbjct: 121 DPLRILEEEKEKL 133
>gb|AER45360.1| P2 [Fig badnavirus 1]
Length = 135
Score = 92.4 bits (228), Expect = 7e-17
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Frame = -3
Query: 539 MNNYIISRNTSSYREVISATDPIESPSTGFAKPSDYQGTTPSXXXXXXXXXXXXXXXXXI 360
M++YI+S+ T+SY+E I A + IESP+TGF +P+D+QG T + I
Sbjct: 1 MSSYIVSQGTNSYKEAIKAPEGIESPATGFVRPADFQGGTSAARVQIKQNNTLIQLLIQI 60
Query: 359 AETLKEIQS----------TLQKQNPTPFPQDLIAKLQNLSISPSKPK--EKPGKLRVFK 216
AE+LK+I+ LQK ++L+ +LQ+LS+ + K EK G RVFK
Sbjct: 61 AESLKDIREEQRVLKEEVRQLQKDKAASITEELVERLQSLSLGVPEKKVAEKKGTFRVFK 120
Query: 215 DPYKILKEEQEKL 177
DP +IL+EE+EKL
Sbjct: 121 DPLRILEEEKEKL 133
>gb|AER45350.1| P2 [Fig badnavirus 1] gi|354990611|gb|AER45354.1| P2 [Fig
badnavirus 1]
Length = 135
Score = 92.4 bits (228), Expect = 7e-17
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 12/133 (9%)
Frame = -3
Query: 539 MNNYIISRNTSSYREVISATDPIESPSTGFAKPSDYQGTTPSXXXXXXXXXXXXXXXXXI 360
M++YI+S+ T+SY+E I AT+ IESP+ GF +P+D+QG T + I
Sbjct: 1 MSSYIVSQGTNSYQEAIKATEGIESPAAGFVRPADFQGGTSAARVQIKQNNTLIQLLIQI 60
Query: 359 AETLKEIQS----------TLQKQNPTPFPQDLIAKLQNLSISPSKPK--EKPGKLRVFK 216
AE+LK+I+ LQK ++L+ +LQ+LS+ + K EK G RVFK
Sbjct: 61 AESLKDIREEQRVLKEEVRQLQKDKAASITEELVERLQSLSLGVPEKKVAEKKGTFRVFK 120
Query: 215 DPYKILKEEQEKL 177
DP +IL+EE+EKL
Sbjct: 121 DPLRILEEEKEKL 133
>ref|YP_006273074.1| hypothetical protein [Fig badnavirus 1] gi|333493964|gb|AEF56563.1|
hypothetical protein [Fig badnavirus 1]
Length = 135
Score = 89.7 bits (221), Expect = 4e-16
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 12/133 (9%)
Frame = -3
Query: 539 MNNYIISRNTSSYREVISATDPIESPSTGFAKPSDYQGTTPSXXXXXXXXXXXXXXXXXI 360
M++YI+S+ T+SY+E I AT+ IESP+ GF +P+D+QG T + I
Sbjct: 1 MSSYIVSQGTNSYKEAIKATEGIESPAAGFVRPADFQGGTSAARVQIKQNNTLIQLLIQI 60
Query: 359 AETLKEIQS----------TLQKQNPTPFPQDLIAKLQNLSISPSKPK--EKPGKLRVFK 216
AE+LK+I+ LQK ++L+ +LQ+LS+ + K EK RVFK
Sbjct: 61 AESLKDIREEQRVLKEEVRQLQKDKAASITEELVERLQSLSLGVPEKKVAEKKRTFRVFK 120
Query: 215 DPYKILKEEQEKL 177
DP +IL+EE+EKL
Sbjct: 121 DPLRILEEEKEKL 133
>gb|ACE74697.1| unknown [Citrus yellow mosaic virus] gi|198385720|gb|ACH86206.1|
unknown [Citrus yellow mosaic virus]
Length = 138
Score = 77.8 bits (190), Expect = 2e-12
Identities = 47/132 (35%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Frame = -3
Query: 533 NYIISRNTSSYREVISATDPIESPSTGFAKPSDYQGT---TPSXXXXXXXXXXXXXXXXX 363
NY + T +Y+ + AT+PI SPS GF P +Y G T +
Sbjct: 2 NYQTTEKTPTYKRALEATEPINSPSLGFVNPEEYSGGITGTKALIKQNNLLIQLVVELSV 61
Query: 362 IAETLKEIQSTLQKQ---------NPTPFPQDLIAKLQNLSISPSKPKEKPGKLRVFKDP 210
TL + + L KQ + T P DL+ KL+NLS+ K +EK G +KDP
Sbjct: 62 NVNTLSDQVAQLAKQLGKQPQQGSSTTALPDDLVDKLRNLSLGTEKKQEKRGTFYAYKDP 121
Query: 209 YKILKEEQEKLK 174
Y I KEE EKLK
Sbjct: 122 YLIYKEEVEKLK 133
>ref|YP_009002584.1| hypothetical protein [Hibiscus bacilliform virus GD1]
gi|584388572|gb|AHI90953.1| hypothetical protein
[Hibiscus bacilliform virus GD1]
Length = 135
Score = 77.0 bits (188), Expect = 3e-12
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 11/127 (8%)
Frame = -3
Query: 521 SRNTSSYREVISATDPIESPSTGFAKPSDYQGTTPSXXXXXXXXXXXXXXXXXIAETLKE 342
+R T+SY+E ++AT+ I+ P+ GFAKPSD G S ++E +
Sbjct: 6 TRATASYKEAVAATEDIQPPAVGFAKPSDNVGAQSSSSVIIKQNNTIIQLLASLSEKVNT 65
Query: 341 IQSTL---------QKQNPTPFPQDLIAKLQNLSIS--PSKPKEKPGKLRVFKDPYKILK 195
+++ + ++ + + P DLI KL+ L+++ +PKE+ G L FKDPY IL+
Sbjct: 66 LETEVRHIKNVFDSREPSTSTLPTDLIEKLEGLTLTDKQERPKERKGTLFAFKDPYVILQ 125
Query: 194 EEQEKLK 174
EE+EKLK
Sbjct: 126 EEKEKLK 132
>gb|AER00537.1| ORF II [Citrus yellow mosaic virus] gi|353453400|gb|AER00543.1| ORF
II [Citrus yellow mosaic virus]
Length = 137
Score = 76.6 bits (187), Expect = 4e-12
Identities = 47/131 (35%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Frame = -3
Query: 530 YIISRNTSSYREVISATDPIESPSTGFAKPSDYQGT---TPSXXXXXXXXXXXXXXXXXI 360
Y + T +Y+ ++AT+PI SPS GF P +Y G T +
Sbjct: 3 YQATEKTPTYKRALAATEPINSPSLGFVNPEEYSGGMTGTKALIKQNNLLIQLVVELSVN 62
Query: 359 AETLKEIQSTLQKQ---------NPTPFPQDLIAKLQNLSISPSKPKEKPGKLRVFKDPY 207
+L E L KQ + T P DL+ KL+NLS+ K KEK G +KDPY
Sbjct: 63 VNSLSEQVDQLAKQLGKQPQQGSSTTALPDDLVDKLRNLSLGTEKKKEKRGTFYAYKDPY 122
Query: 206 KILKEEQEKLK 174
I KEE EKLK
Sbjct: 123 LIYKEEVEKLK 133
>gb|ACB87149.1| unknown [Citrus yellow mosaic virus]
Length = 137
Score = 76.3 bits (186), Expect = 5e-12
Identities = 47/131 (35%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Frame = -3
Query: 530 YIISRNTSSYREVISATDPIESPSTGFAKPSDYQGT---TPSXXXXXXXXXXXXXXXXXI 360
Y + T +Y+ ++AT+PI SPS GF P +Y G T +
Sbjct: 3 YQATEKTPTYKRALAATEPINSPSLGFVNPEEYSGGITGTKALIKQNNLLIQLVVELSVN 62
Query: 359 AETLKEIQSTLQKQ---------NPTPFPQDLIAKLQNLSISPSKPKEKPGKLRVFKDPY 207
+L E L KQ + T P DL+ KL+NLS+ K KEK G +KDPY
Sbjct: 63 INSLSEQVDQLAKQLGKQPQQGSSTTALPDDLVDKLRNLSLGTEKKKEKRGTFYAYKDPY 122
Query: 206 KILKEEQEKLK 174
I KEE EKLK
Sbjct: 123 LIYKEEVEKLK 133
>ref|YP_008567618.1| ORF2 [Piper yellow mottle virus] gi|540357467|gb|AGV08295.1| ORF2
[Piper yellow mottle virus]
Length = 154
Score = 75.9 bits (185), Expect = 7e-12
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Frame = -3
Query: 533 NYIISRNTSSYREVISATDPIESPSTGFAKPSDY-----QGTTPSXXXXXXXXXXXXXXX 369
+YI + +TS+Y+E + AT+ +E P+ GF KP D+ Q + +
Sbjct: 2 SYINTISTSAYKEALQATEQLEEPALGFVKPRDHNREGIQKSVTAVTKQNNTLIQLVVDL 61
Query: 368 XXIAETLKEIQSTLQKQNP--TPFPQDLIAKLQNLSISP--SKPKEKPGKLRVFKDPYKI 201
TL+E L+K+ P T DL+ KL+NL++ KPKE GK VFKDP +I
Sbjct: 62 HEKINTLEEKIEKLRKEPPQSTGISADLVTKLENLTLQDQGKKPKESRGKRLVFKDPLEI 121
Query: 200 LKEEQEKLKGLWPLQDQNNSK*PQH 126
+K E+ KL G P +N+ P H
Sbjct: 122 IKAEKRKLDG--PGPSKNSGGGPNH 144
>gb|ACE76863.1| unknown [Citrus yellow mosaic virus]
Length = 137
Score = 75.1 bits (183), Expect = 1e-11
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 12/132 (9%)
Frame = -3
Query: 533 NYIISRNTSSYREVISATDPIESPSTGFAKPSDYQGT---TPSXXXXXXXXXXXXXXXXX 363
NY + T +Y+ + AT+ I SP+ GF P DY G T +
Sbjct: 2 NYQATEKTPTYKRALEATESINSPALGFINPEDYSGGITGTKALIKQNNLLIQLVVEFSV 61
Query: 362 IAETLKEIQSTLQKQ---------NPTPFPQDLIAKLQNLSISPSKPKEKPGKLRVFKDP 210
+L + + L KQ + T P DL+ KL+NLS+ K KEK G +KDP
Sbjct: 62 NVNSLSDQVAQLTKQLGKQPQQGSSTTALPDDLVEKLRNLSLDTEKKKEKRGTFYAYKDP 121
Query: 209 YKILKEEQEKLK 174
Y I KEE EKLK
Sbjct: 122 YLIYKEEVEKLK 133
>gb|ACE76857.1| unknown [Citrus yellow mosaic virus]
Length = 137
Score = 74.3 bits (181), Expect = 2e-11
Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Frame = -3
Query: 530 YIISRNTSSYREVISATDPIESPSTGFAKPSDYQG---TTPSXXXXXXXXXXXXXXXXXI 360
Y ++ T +Y+ ++AT+PI SPS GF P +Y G T +
Sbjct: 3 YQVTEKTPTYKRALAATEPINSPSLGFVNPEEYSGGITGTKALIKQNNLLIQLVVELSVN 62
Query: 359 AETLKEIQSTLQKQ---------NPTPFPQDLIAKLQNLSISPSKPKEKPGKLRVFKDPY 207
+L + + L +Q + T P DLI KL++LS+ K KEK G +KDPY
Sbjct: 63 VNSLSDQVAQLTEQLGKQPQQGSSSTALPDDLIDKLRDLSLGTEKKKEKRGTFYAYKDPY 122
Query: 206 KILKEEQEKLK 174
I KEE EKLK
Sbjct: 123 LIYKEEVEKLK 133
>gb|ACB87155.1| unknown [Citrus yellow mosaic virus]
Length = 137
Score = 74.3 bits (181), Expect = 2e-11
Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Frame = -3
Query: 530 YIISRNTSSYREVISATDPIESPSTGFAKPSDYQGT---TPSXXXXXXXXXXXXXXXXXI 360
Y + T +Y+ ++AT+PI SPS GF P +Y G T +
Sbjct: 3 YQATEKTPTYKRALAATEPINSPSLGFVNPEEYSGGITGTKALIKQNNLLIQLVVELSVN 62
Query: 359 AETLKEIQSTLQKQ---------NPTPFPQDLIAKLQNLSISPSKPKEKPGKLRVFKDPY 207
L E L KQ + T P DL+ KL++LS+ K KEK G +KDPY
Sbjct: 63 VNNLSEQVDQLAKQLGKQPQQGSSTTALPDDLVDKLRSLSLGTEKKKEKRGTFYAYKDPY 122
Query: 206 KILKEEQEKLK 174
I KEE EKLK
Sbjct: 123 LIYKEEVEKLK 133
>gb|ACO55657.1| unknown [Citrus yellow mosaic virus]
Length = 137
Score = 73.2 bits (178), Expect = 4e-11
Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Frame = -3
Query: 530 YIISRNTSSYREVISATDPIESPSTGFAKPSDYQGT---TPSXXXXXXXXXXXXXXXXXI 360
Y + T +Y+ + AT+PI SP+ GF P DY G T +
Sbjct: 3 YQNTEKTPTYKRALEATEPINSPALGFINPEDYSGGITGTKALIKQNNLLIQLVVELSVN 62
Query: 359 AETLKEIQSTLQKQ---------NPTPFPQDLIAKLQNLSISPSKPKEKPGKLRVFKDPY 207
+L E + L +Q + P DLI KL+NLS+ K KEK G +KDPY
Sbjct: 63 VNSLSEQVAQLTRQLGKQPQQGSSTATLPDDLIDKLKNLSLGTEKKKEKRGTFYAYKDPY 122
Query: 206 KILKEEQEKLK 174
I KEE EKLK
Sbjct: 123 LIYKEEVEKLK 133
>ref|NP_569152.1| hypothetical protein CYMVgp2 [Citrus yellow mosaic virus]
gi|16416938|gb|AAL18494.1|AF347695_2 unknown [citrus
yellow mosaic virus]
Length = 137
Score = 72.8 bits (177), Expect = 6e-11
Identities = 45/131 (34%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Frame = -3
Query: 530 YIISRNTSSYREVISATDPIESPSTGFAKPSDYQGT---TPSXXXXXXXXXXXXXXXXXI 360
Y + T +Y+ + AT+PI SP+ GF P DY G T +
Sbjct: 3 YQNTEKTPTYKRALEATEPINSPALGFINPEDYSGGITGTKALIKQNNLLIQLVVELSVN 62
Query: 359 AETLKEIQSTLQKQ---------NPTPFPQDLIAKLQNLSISPSKPKEKPGKLRVFKDPY 207
+L E + L +Q + P DL+ KL+NLS+ K KEK G +KDPY
Sbjct: 63 VNSLSEQVAQLTRQLGKQPQQGSSTATLPDDLVDKLKNLSLGTEKKKEKRGTFYAYKDPY 122
Query: 206 KILKEEQEKLK 174
I KEE EKLK
Sbjct: 123 LIYKEEVEKLK 133