BLASTX nr result

ID: Zingiber24_contig00045488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00045488
         (287 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-l...    63   5e-08
ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-l...    57   3e-06
gb|EXB76313.1| WD repeat-containing protein 44 [Morus notabilis]       56   6e-06
emb|CBI20340.3| unnamed protein product [Vitis vinifera]               55   1e-05

>ref|XP_002282052.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 880

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 38/84 (45%), Positives = 49/84 (58%)
 Frame = -1

Query: 269 PFATSSYDVWISDLSSVEERRRRLFQQLGLSGHLSLARTHPPADASGPTETVVEVNPPRH 90
           P   S YD+WIS+ SS+EERR RL +++GLS   SL+R  P AD S   +    V+  R 
Sbjct: 57  PIGASKYDIWISEPSSIEERRSRLLREMGLSNDPSLSRVKPTADRSN-GDIGRSVSSDRL 115

Query: 89  AHDGIPKPSSPTGVVIFRSRSDGS 18
           A  G        GVVI RS+SDG+
Sbjct: 116 AGQG------EAGVVICRSKSDGA 133


>ref|XP_004141232.1| PREDICTED: WD repeat-containing protein 44-like [Cucumis sativus]
           gi|449498657|ref|XP_004160597.1| PREDICTED: WD
           repeat-containing protein 44-like [Cucumis sativus]
          Length = 918

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/89 (37%), Positives = 50/89 (56%)
 Frame = -1

Query: 269 PFATSSYDVWISDLSSVEERRRRLFQQLGLSGHLSLARTHPPADASGPTETVVEVNPPRH 90
           P A S+YD+WIS+ +SV ERR RL +++GLSG  SL+R +   +     + V +      
Sbjct: 58  PMAVSNYDIWISEPASVLERRSRLLREMGLSGDPSLSRANTALELDHKEKGVGDFGRSVS 117

Query: 89  AHDGIPKPSSPTGVVIFRSRSDGSAGPNR 3
           +     +   P  ++  RS+SDGSA  NR
Sbjct: 118 SDYLTSQQQQPPAII--RSKSDGSADCNR 144


>gb|EXB76313.1| WD repeat-containing protein 44 [Morus notabilis]
          Length = 981

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/84 (41%), Positives = 45/84 (53%)
 Frame = -1

Query: 269 PFATSSYDVWISDLSSVEERRRRLFQQLGLSGHLSLARTHPPADASGPTETVVEVNPPRH 90
           P   S YDVWIS+ SSV ERRRRL +++GLS   SL+R  P  D  G             
Sbjct: 67  PMRVSHYDVWISEPSSVSERRRRLLREMGLSHDPSLSRAKPTDDGCGEFGRSA------- 119

Query: 89  AHDGIPKPSSPTGVVIFRSRSDGS 18
           + D + +     G+V  RS+SDGS
Sbjct: 120 SSDQLTRQRQAAGMV--RSKSDGS 141


>emb|CBI20340.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = -1

Query: 269 PFATSSYDVWISDLSSVEERRRRLFQQLGLSGHLSLARTHPPADAS 132
           P   S YD+WIS+ SS+EERR RL +++GLS   SL+R  P AD S
Sbjct: 57  PIGASKYDIWISEPSSIEERRSRLLREMGLSNDPSLSRVKPTADRS 102


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