BLASTX nr result
ID: Zingiber24_contig00045473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045473
(239 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004985145.1| PREDICTED: uncharacterized protein LOC101786... 81 2e-13
ref|XP_004985144.1| PREDICTED: uncharacterized protein LOC101786... 81 2e-13
gb|EMT09584.1| Nuclear pore complex protein [Aegilops tauschii] 73 4e-11
gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii] 72 8e-11
ref|XP_003558449.1| PREDICTED: uncharacterized protein LOC100845... 72 8e-11
gb|EEC74795.1| hypothetical protein OsI_10588 [Oryza sativa Indi... 70 4e-10
ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|3555192... 69 8e-10
ref|XP_002468240.1| hypothetical protein SORBIDRAFT_01g042300 [S... 69 8e-10
gb|AFW89130.1| hypothetical protein ZEAMMB73_062974, partial [Ze... 68 1e-09
ref|XP_006651186.1| PREDICTED: uncharacterized protein LOC102709... 68 1e-09
ref|NP_001049433.1| Os03g0225500 [Oryza sativa Japonica Group] g... 67 3e-09
emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CA... 65 1e-08
gb|EOX93469.1| Nucleoporin, Nup133/Nup155-like, putative isoform... 62 8e-08
gb|EOX93468.1| Nucleoporin, Nup133/Nup155-like, putative isoform... 62 8e-08
gb|EOX93467.1| Nucleoporin, Nup133/Nup155-like, putative isoform... 62 8e-08
gb|EOX93466.1| Nucleoporin, Nup133/Nup155-like, putative isoform... 62 8e-08
ref|XP_004491571.1| PREDICTED: uncharacterized protein LOC101503... 61 2e-07
ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249... 60 2e-07
gb|AAN52748.1| Unknown protein [Oryza sativa Japonica Group] 60 2e-07
ref|XP_004165867.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 60 3e-07
>ref|XP_004985145.1| PREDICTED: uncharacterized protein LOC101786330 isoform X2 [Setaria
italica]
Length = 1292
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQPLEESDRSMGLERFNSIIATAIPGNSQECLALAC 58
+T A+AYW DIY+E + S ++S L SD + RFNSIIA A+PG + EC+A+A
Sbjct: 196 RTQAVAYWPDIYAEFNRSLVLSSPFDELSASDGASDRFRFNSIIAAAVPGGTHECIAIAS 255
Query: 57 QATGGLWLFKFSLSGIHQE 1
+ TG LWLFK S GI QE
Sbjct: 256 EPTGALWLFKCSPEGIRQE 274
>ref|XP_004985144.1| PREDICTED: uncharacterized protein LOC101786330 isoform X1 [Setaria
italica]
Length = 1293
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQPLEESDRSMGLERFNSIIATAIPGNSQECLALAC 58
+T A+AYW DIY+E + S ++S L SD + RFNSIIA A+PG + EC+A+A
Sbjct: 196 RTQAVAYWPDIYAEFNRSLVLSSPFDELSASDGASDRFRFNSIIAAAVPGGTHECIAIAS 255
Query: 57 QATGGLWLFKFSLSGIHQE 1
+ TG LWLFK S GI QE
Sbjct: 256 EPTGALWLFKCSPEGIRQE 274
>gb|EMT09584.1| Nuclear pore complex protein [Aegilops tauschii]
Length = 1432
Score = 72.8 bits (177), Expect = 4e-11
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHS-PMVSL-ATQPLEESDRSMGLERFNSIIATAIPGNSQECLAL 64
+T A+AYW DIY ESS P++SL SD G RFNS+IA ++PG + EC+A+
Sbjct: 175 RTQAIAYWPDIYDESSSKGPVISLFGHSDTSASDAISGCYRFNSLIAASVPGAAHECIAI 234
Query: 63 ACQATGGLWLFKFSLSGIHQ 4
A + TG LWLF+ S IH+
Sbjct: 235 ASEPTGALWLFQCSPLRIHR 254
>gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]
Length = 1176
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHS-PMVSL-ATQPLEESDRSMGLERFNSIIATAIPGNSQECLAL 64
+T A+AYW DIY ESS P++SL SD G RFNS+IA ++PG + EC+A+
Sbjct: 192 RTQAIAYWPDIYDESSSKGPVLSLFGHSDTSASDAISGCYRFNSLIAVSVPGAAHECIAI 251
Query: 63 ACQATGGLWLFKFSLSGIHQ 4
A + TG LWLF+ S IH+
Sbjct: 252 ASEPTGALWLFQCSPLRIHR 271
>ref|XP_003558449.1| PREDICTED: uncharacterized protein LOC100845532 [Brachypodium
distachyon]
Length = 1293
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/79 (49%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSL-ATQPLEESDRSMGLERFNSIIATAIPGNSQECLALA 61
+T A+AYW DIY +SS SP +SL SD + G FNS+IAT+IPG QEC+ +A
Sbjct: 195 RTQAIAYWPDIY-DSSKSPALSLFGYSGASASDGTSGCHTFNSLIATSIPGRIQECIVIA 253
Query: 60 CQATGGLWLFKFSLSGIHQ 4
+ TG LWLF+ S IH+
Sbjct: 254 SEPTGTLWLFQCSPVEIHR 272
>gb|EEC74795.1| hypothetical protein OsI_10588 [Oryza sativa Indica Group]
Length = 1290
Score = 69.7 bits (169), Expect = 4e-10
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ-PLEESDRSMGLERFNSIIATAIPGNSQECLALA 61
+T A+AYWSDIY+ESS SP++ L D + G R NS+IA A+PG EC+ +A
Sbjct: 195 RTQAIAYWSDIYAESSKSPVLDLIGYGDTSSGDGTSGNCRINSLIAVAVPGGINECIVIA 254
Query: 60 CQATGGLWLFKFSLSGIHQ 4
Q TG LW+F S + + +
Sbjct: 255 SQPTGTLWMFWCSPAAVRR 273
>ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|355519281|gb|AET00905.1|
Nucleoporin [Medicago truncatula]
Length = 1308
Score = 68.6 bits (166), Expect = 8e-10
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLAT------------------QPLEESDRSMGLERFNS 112
+T A+ YW DIYS+SS++P+ SLA+ Q +E+D + L FNS
Sbjct: 187 KTRAVIYWPDIYSQSSNAPVTSLASSDELEAVGEKTPFKRQTRQSKQETDLTE-LNAFNS 245
Query: 111 IIATAIPGNSQECLALACQATGGLWLFKFSLSGIHQ 4
+IA+ +PG S C+ALAC ++G LW F+ S +GI +
Sbjct: 246 VIASVVPGYSLACIALACSSSGELWQFECSPTGIRR 281
>ref|XP_002468240.1| hypothetical protein SORBIDRAFT_01g042300 [Sorghum bicolor]
gi|241922094|gb|EER95238.1| hypothetical protein
SORBIDRAFT_01g042300 [Sorghum bicolor]
Length = 1293
Score = 68.6 bits (166), Expect = 8e-10
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ-PLEESDRSMGLERFNSIIATAIPGNSQECLALA 61
+T A+AYW DIY+E + S ++S + + D + RFNS+IA A+PG EC+A+A
Sbjct: 196 RTQAVAYWPDIYAEFNRSLVLSSSGDGEVSACDAASDCLRFNSLIAAAVPGCIHECIAIA 255
Query: 60 CQATGGLWLFKFSLSGIHQ 4
G LWLF+ S GIHQ
Sbjct: 256 SDPAGALWLFQCSPEGIHQ 274
>gb|AFW89130.1| hypothetical protein ZEAMMB73_062974, partial [Zea mays]
Length = 477
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ-PLEESDRSMGLERFNSIIATAIPGNSQECLALA 61
+T A+AYW DI +ESS SP++S + + + RFNS+IA A+PG EC+A+A
Sbjct: 193 RTQAVAYWPDISAESSRSPVLSSSDHGEVSTCGAASDFLRFNSLIAAAVPGCIHECIAIA 252
Query: 60 CQATGGLWLFKFSLSGIHQ 4
+ G LWLF+ S GI Q
Sbjct: 253 SEPAGALWLFQCSPEGIRQ 271
>ref|XP_006651186.1| PREDICTED: uncharacterized protein LOC102709727 [Oryza brachyantha]
Length = 1210
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSL-ATQPLEESDRSMGLERFNSIIATAIPGNSQECLALA 61
+T A+AYW DIY+E+S SP++ L + D + G R +S+IA A+PG EC+ +A
Sbjct: 113 RTQAMAYWPDIYTENSKSPVLGLFGCRDTSSDDGTSGNCRISSLIAAAVPGGINECIVIA 172
Query: 60 CQATGGLWLFKFSLSGIHQ 4
+ TG LWLF+ S + +++
Sbjct: 173 SEPTGTLWLFQCSPAAVNR 191
>ref|NP_001049433.1| Os03g0225500 [Oryza sativa Japonica Group]
gi|108706942|gb|ABF94737.1| Nup133 nucleoporin family
protein, expressed [Oryza sativa Japonica Group]
gi|113547904|dbj|BAF11347.1| Os03g0225500 [Oryza sativa
Japonica Group] gi|222624495|gb|EEE58627.1| hypothetical
protein OsJ_09987 [Oryza sativa Japonica Group]
Length = 1290
Score = 66.6 bits (161), Expect = 3e-09
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ-PLEESDRSMGLERFNSIIATAIPGNSQECLALA 61
+T A+AYWSDIY+ESS S ++ L D + G R NS+IA A+PG EC+ +A
Sbjct: 195 RTQAIAYWSDIYAESSKSSVLDLIGYGDTSSGDGTSGNCRINSLIAVAVPGGINECIVIA 254
Query: 60 CQATGGLWLFKFSLSGIHQ 4
Q TG LW+F S + + +
Sbjct: 255 SQPTGTLWMFWCSPAAVRR 273
>emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CAI64811.1|
nucleoporin [Lotus japonicus]
Length = 1309
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 16/94 (17%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQP----------------LEESDRSMGLERFNSII 106
+T A+ YW DIYS+S ++P+ +L + L L FNS+I
Sbjct: 188 KTRAVVYWPDIYSQSRNAPVTNLVSSDEFVTSLVSDGKTFSNWLRRPSSLNELHMFNSMI 247
Query: 105 ATAIPGNSQECLALACQATGGLWLFKFSLSGIHQ 4
A+A+PG C+A AC ++G LW FK S SGIH+
Sbjct: 248 ASAVPGCDFVCVAFACSSSGKLWQFKCSPSGIHR 281
>gb|EOX93469.1| Nucleoporin, Nup133/Nup155-like, putative isoform 4 [Theobroma
cacao]
Length = 1215
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 21/97 (21%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ--------PLEESDRS-------------MGLER 121
+T A+ YWSDI+++ ++P+ S A+ P++ ++ + +G
Sbjct: 87 KTRAVVYWSDIFADVGNAPVTSFASSDESLVTSSPIDGNNTTSRQQQRSRHGMSFIGSSS 146
Query: 120 FNSIIATAIPGNSQECLALACQATGGLWLFKFSLSGI 10
FNS+IA+AIPG C+ALAC ++G LW F S SGI
Sbjct: 147 FNSLIASAIPGTQHVCVALACSSSGELWQFYCSPSGI 183
>gb|EOX93468.1| Nucleoporin, Nup133/Nup155-like, putative isoform 3 [Theobroma
cacao]
Length = 1331
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 21/97 (21%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ--------PLEESDRS-------------MGLER 121
+T A+ YWSDI+++ ++P+ S A+ P++ ++ + +G
Sbjct: 202 KTRAVVYWSDIFADVGNAPVTSFASSDESLVTSSPIDGNNTTSRQQQRSRHGMSFIGSSS 261
Query: 120 FNSIIATAIPGNSQECLALACQATGGLWLFKFSLSGI 10
FNS+IA+AIPG C+ALAC ++G LW F S SGI
Sbjct: 262 FNSLIASAIPGTQHVCVALACSSSGELWQFYCSPSGI 298
>gb|EOX93467.1| Nucleoporin, Nup133/Nup155-like, putative isoform 2 [Theobroma
cacao]
Length = 1156
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 21/97 (21%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ--------PLEESDRS-------------MGLER 121
+T A+ YWSDI+++ ++P+ S A+ P++ ++ + +G
Sbjct: 202 KTRAVVYWSDIFADVGNAPVTSFASSDESLVTSSPIDGNNTTSRQQQRSRHGMSFIGSSS 261
Query: 120 FNSIIATAIPGNSQECLALACQATGGLWLFKFSLSGI 10
FNS+IA+AIPG C+ALAC ++G LW F S SGI
Sbjct: 262 FNSLIASAIPGTQHVCVALACSSSGELWQFYCSPSGI 298
>gb|EOX93466.1| Nucleoporin, Nup133/Nup155-like, putative isoform 1 [Theobroma
cacao]
Length = 1330
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 21/97 (21%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ--------PLEESDRS-------------MGLER 121
+T A+ YWSDI+++ ++P+ S A+ P++ ++ + +G
Sbjct: 202 KTRAVVYWSDIFADVGNAPVTSFASSDESLVTSSPIDGNNTTSRQQQRSRHGMSFIGSSS 261
Query: 120 FNSIIATAIPGNSQECLALACQATGGLWLFKFSLSGI 10
FNS+IA+AIPG C+ALAC ++G LW F S SGI
Sbjct: 262 FNSLIASAIPGTQHVCVALACSSSGELWQFYCSPSGI 298
>ref|XP_004491571.1| PREDICTED: uncharacterized protein LOC101503807 [Cicer arietinum]
Length = 1311
Score = 60.8 bits (146), Expect = 2e-07
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLA-----------------TQPLEESDRSMGLERFNSI 109
+T A+ YW +IYS+S ++ + SLA T+ + GL FNS+
Sbjct: 189 KTRAVLYWPEIYSQSGNALVTSLASSDEYEAVGEKTSFSRQTRQSKPGTGLNGLNEFNSV 248
Query: 108 IATAIPGNSQECLALACQATGGLWLFKFSLSGIHQ 4
IA+A+PG S C+A AC + G LW F+ S +GI +
Sbjct: 249 IASAVPGCSFACVAFACSSNGELWKFECSPTGIRR 283
>ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249432 isoform 1 [Vitis
vinifera]
Length = 1330
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 21/100 (21%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQPLEE---------------------SDRSMGLER 121
+T + YW DIY++ +P+VS A+ E S+G
Sbjct: 196 KTRTVVYWPDIYAQGDVAPVVSFASSDGSELNFSPGNGKITPNKLWQHSRLGSNSVGSSS 255
Query: 120 FNSIIATAIPGNSQECLALACQATGGLWLFKFSLSGIHQE 1
FNS+IA+A+P +C+ALA + G LW F+ S +GIH++
Sbjct: 256 FNSLIASAVPDTQHKCIALASSSNGELWQFQCSPAGIHRK 295
>gb|AAN52748.1| Unknown protein [Oryza sativa Japonica Group]
Length = 1247
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/78 (41%), Positives = 44/78 (56%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQPLEESDRSMGLERFNSIIATAIPGNSQECLALAC 58
+T A+AYWSDIY+ESS D + G R NS+IA A+PG EC+ +A
Sbjct: 138 RTQAIAYWSDIYAESS---------------DGTSGNCRINSLIAVAVPGGINECIVIAS 182
Query: 57 QATGGLWLFKFSLSGIHQ 4
Q TG LW+F S + + +
Sbjct: 183 QPTGTLWMFWCSPAAVRR 200
>ref|XP_004165867.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101211181
[Cucumis sativus]
Length = 1323
Score = 60.1 bits (144), Expect = 3e-07
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 14/90 (15%)
Frame = -3
Query: 237 QTGALAYWSDIYSESSHSPMVSLATQ----PLEE-------SDRSMGLER---FNSIIAT 100
+TGA+AYW DI+S+ +P+ L + P+ S R+ + R FNS+IA+
Sbjct: 199 KTGAVAYWPDIFSDGETAPVTCLTSSHEPAPISSFYDGKITSHRNQSMNRPRTFNSLIAS 258
Query: 99 AIPGNSQECLALACQATGGLWLFKFSLSGI 10
A+P + C+ALAC + G LW + S GI
Sbjct: 259 AVPDSQYVCIALACSSNGQLWQYHCSPMGI 288