BLASTX nr result

ID: Zingiber24_contig00045379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00045379
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera]   111   9e-23
emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera]   107   1e-21
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   102   5e-20
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   100   3e-19
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   100   3e-19
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]   100   3e-19
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    98   1e-18
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    97   2e-18
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]    97   3e-18
emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]    96   4e-18
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]    96   5e-18
ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669...    95   1e-17
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...    95   1e-17
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...    94   1e-17
emb|CAN81437.1| hypothetical protein VITISV_001281 [Vitis vinifera]    94   1e-17
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]          94   1e-17
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...    94   1e-17
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...    94   2e-17
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...    94   2e-17
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]    94   2e-17

>emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera]
          Length = 338

 Score =  111 bits (278), Expect = 9e-23
 Identities = 52/90 (57%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPH-IEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTD 91
           LN N   +   +    GLP+ IE K  VC+GCA GK HR  F KGV+WRAK+ LELIHTD
Sbjct: 195 LNFNSLKMLYQRKMVQGLPNTIEEKNEVCDGCALGKHHRQSFLKGVAWRAKKVLELIHTD 254

Query: 90  VCGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           +CGPM   S   N+YF+LFIDD TRMTWV+
Sbjct: 255 ICGPMSIPSQGNNKYFVLFIDDFTRMTWVF 284


>emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera]
          Length = 567

 Score =  107 bits (268), Expect = 1e-21
 Identities = 49/90 (54%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPH-IEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTD 91
           LN N   +   +     LP+ IE K  +CE C  GK HR  F KGV+WRAK+ LELIHTD
Sbjct: 132 LNFNRLKMLCQRKMVQRLPNTIEEKNEICEDCXLGKHHRQSFXKGVAWRAKKVLELIHTD 191

Query: 90  VCGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           +CGPM T SH  N+YF+LFIDD  R+TWV+
Sbjct: 192 ICGPMSTPSHGNNKYFVLFIDDFXRITWVF 221


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score =  102 bits (254), Expect = 5e-20
 Identities = 42/78 (53%), Positives = 55/78 (70%)
 Frame = -3

Query: 234 QASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDVCGPMDTLSHAQ 55
           Q    G+ +I+ +  +CE C FGK HR  FP G SWRA + LEL+HTD+CGPM T +H  
Sbjct: 457 QHMVRGMSNIKKEDQLCEACVFGKHHRNSFPTGGSWRASKPLELVHTDLCGPMRTTTHGG 516

Query: 54  NRYFILFIDDHTRMTWVY 1
           NRYF+ FIDD++R TW+Y
Sbjct: 517 NRYFLTFIDDYSRKTWIY 534


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN+    L + +    GLP I+   +VCEGC +GKQ + PFPKG S RA   LE+IH D+
Sbjct: 447 LNVKGLKLLSKKEMVFGLPKIDSV-NVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADL 505

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGPM T S   +RYF+LF DDH+RM+WVY
Sbjct: 506 CGPMQTASFGGSRYFLLFTDDHSRMSWVY 534


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN+    L + +    GLP I+   +VCEGC +GKQ + PFPKG S RA   LE+IH D+
Sbjct: 432 LNVKGLKLLSKKEMVFGLPKIDSV-NVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADL 490

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGPM T S   +RYF+LF DDH+RM+WVY
Sbjct: 491 CGPMQTASFGGSRYFLLFTDDHSRMSWVY 519


>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
          Length = 808

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 41/74 (55%), Positives = 54/74 (72%)
 Frame = -3

Query: 222 SGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDVCGPMDTLSHAQNRYF 43
           +GLP I+    +CE C  GKQHR  FPKG SW+A + LEL+H+D+CGP++  S+   RYF
Sbjct: 3   TGLPPIQTPSQICEECVVGKQHRYQFPKGKSWKANKVLELVHSDICGPINPTSNGGKRYF 62

Query: 42  ILFIDDHTRMTWVY 1
           I FIDD++R TWVY
Sbjct: 63  ITFIDDYSRKTWVY 76


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 46/89 (51%), Positives = 60/89 (67%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN+    L + +    GLP I+   +VCEGC +GKQ + PFPKG S RA   LE+IH D+
Sbjct: 381 LNVKGLKLLSKKEMVFGLPKIDSV-NVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADL 439

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGPM T S   +RYF+LF +DH+RM+WVY
Sbjct: 440 CGPMQTASFGGSRYFLLFTNDHSRMSWVY 468


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 46/89 (51%), Positives = 59/89 (66%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN+    L + +    GLP I+   +VCEGC +GKQ + PFPKG S RA   LE+IH D+
Sbjct: 433 LNVKGLKLLSKKEMVFGLPKIDSV-NVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADL 491

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGPM   S   +RYF+LF DDH+RM+WVY
Sbjct: 492 CGPMQIASFGGSRYFLLFTDDHSRMSWVY 520


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 46/89 (51%), Positives = 59/89 (66%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN+    L + +     LP I+   +VCEGC +GKQ + PFPKG S RA   LE+IH D+
Sbjct: 558 LNVKGLKLLSKKEMVFELPKIDSV-NVCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADL 616

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGPM T S   +RYF+LF DDH+RM+WVY
Sbjct: 617 CGPMQTASFGGSRYFLLFTDDHSRMSWVY 645


>emb|CAN71445.1| hypothetical protein VITISV_042489 [Vitis vinifera]
          Length = 1246

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
 Frame = -3

Query: 264 NINYADLKAHQAST--SGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTD 91
           ++N+  LK  Q     +GLP I+    +CE C  GKQHR  FPKG SWR  + LEL+H+D
Sbjct: 432 HLNFXXLKTLQXKNMVTGLPXIQTXSQICEECVXGKQHRYQFPKGKSWRXNKVLELVHSD 491

Query: 90  VCGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           +CGP++  S+   RYFI FI D++  TWVY
Sbjct: 492 ICGPINPTSNGGKRYFITFIXDYSWKTWVY 521


>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
          Length = 1283

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
 Frame = -3

Query: 264 NINYADLKAHQAST--SGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTD 91
           ++N+  LK  Q     +GLP I     +CE C  GKQHR  FPKG SWR  + LEL+H+D
Sbjct: 432 HLNFGGLKTLQQKNMVTGLPPIXTPSQICEECVVGKQHRYQFPKGKSWRXNKVLELVHSD 491

Query: 90  VCGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           +CGP++  S+   RYFI FI D++  TWVY
Sbjct: 492 ICGPINPTSNGGKRYFITFIXDYSXKTWVY 521


>ref|XP_006590177.1| PREDICTED: uncharacterized protein LOC102669657 [Glycine max]
          Length = 711

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 44/83 (53%), Positives = 55/83 (66%)
 Frame = -3

Query: 249 DLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDVCGPMDT 70
           +L A +    GLP I     +CEGC  GKQ R  FPK  + RA + LELIHTDVCGP+  
Sbjct: 354 ELLAKKEMVRGLPSINHPDQLCEGCLIGKQFRKSFPKESTTRATKPLELIHTDVCGPIKP 413

Query: 69  LSHAQNRYFILFIDDHTRMTWVY 1
            S  +N+YF+LFIDD++R TWVY
Sbjct: 414 NSFGKNKYFLLFIDDYSRKTWVY 436


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN    +L + +    GLP I     VCEGC  GKQ ++ FPK  S RA++ LELIHTDV
Sbjct: 475 LNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDV 534

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGP+   S  ++ YF+LFIDD +R TWVY
Sbjct: 535 CGPIKPKSLGKSNYFLLFIDDFSRKTWVY 563


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN    +L + +    GLP I     VCEGC  GKQ ++ FPK  S RA++ LELIHTDV
Sbjct: 475 LNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDV 534

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGP+   S  ++ YF+LFIDD +R TWVY
Sbjct: 535 CGPIKPKSLGKSNYFLLFIDDFSRKTWVY 563


>emb|CAN81437.1| hypothetical protein VITISV_001281 [Vitis vinifera]
          Length = 1008

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -3

Query: 264 NINYADLKAHQAS--TSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTD 91
           ++N+  LK  Q     + LP I     VCE C   KQHR  FP+G SWRAK  LELIH+D
Sbjct: 315 HLNFVGLKTLQQKDMVTSLPQITIPSQVCEECVVSKQHRSQFPQGKSWRAKSVLELIHSD 374

Query: 90  VCGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           +CG ++  S+   RY I FIDD+TR TWVY
Sbjct: 375 ICGXINPSSNGGKRYLITFIDDYTRKTWVY 404


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN    +L + +    GLP I     VCEGC  GKQ ++ FPK  S RA++ LELIHTDV
Sbjct: 475 LNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDV 534

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGP+   S  ++ YF+LFIDD +R TWVY
Sbjct: 535 CGPIKPKSLGKSNYFLLFIDDFSRKTWVY 563


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 45/89 (50%), Positives = 57/89 (64%)
 Frame = -3

Query: 267 LNINYADLKAHQASTSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDV 88
           LN    +L + +    GLP I     VCEGC  GKQ ++ FPK  S RA++ LELIHTDV
Sbjct: 475 LNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDV 534

Query: 87  CGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           CGP+   S  ++ YF+LFIDD +R TWVY
Sbjct: 535 CGPIKPKSLGKSNYFLLFIDDFSRKTWVY 563


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1198

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
 Frame = -3

Query: 264 NINYADLKAHQAS--TSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTD 91
           ++NY  LK  +      GLP I  K   CEGC FGKQ R  FP   +WRA   LEL+HTD
Sbjct: 415 HLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHTD 474

Query: 90  VCGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           + G + T+S   N YFI FIDD+TRM WVY
Sbjct: 475 IVGKVPTISEGGNWYFITFIDDYTRMIWVY 504


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
           gi|31429795|gb|AAP51797.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1350

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
 Frame = -3

Query: 264 NINYADLKAHQAS--TSGLPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTD 91
           ++NY  LK  +      GLP I  K   CEGC FGKQ R  FP   +WRA   LEL+HTD
Sbjct: 387 HLNYRALKLLRTKGMVQGLPFITLKSDPCEGCVFGKQIRASFPHSGAWRASAPLELVHTD 446

Query: 90  VCGPMDTLSHAQNRYFILFIDDHTRMTWVY 1
           + G + T+S   N YFI FIDD+TRM WVY
Sbjct: 447 IVGKVPTISEGGNWYFITFIDDYTRMIWVY 476


>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 42/72 (58%), Positives = 49/72 (68%)
 Frame = -3

Query: 216 LPHIEGKQHVCEGCAFGKQHRLPFPKGVSWRAKEKLELIHTDVCGPMDTLSHAQNRYFIL 37
           +P I      CE C  GKQ R PFP+ +S RA  KLELIH+D+CGPM T S + N YF L
Sbjct: 484 MPEISVNAQTCESCELGKQQRQPFPQNMSKRATHKLELIHSDICGPMSTTSLSNNVYFAL 543

Query: 36  FIDDHTRMTWVY 1
           FIDD +RMTWVY
Sbjct: 544 FIDDFSRMTWVY 555


Top