BLASTX nr result

ID: Zingiber24_contig00045362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00045362
         (283 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309462.2| hypothetical protein POPTR_0006s16720g, part...    62   1e-07
emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]                62   1e-07

>ref|XP_002309462.2| hypothetical protein POPTR_0006s16720g, partial [Populus
           trichocarpa] gi|550336492|gb|EEE92985.2| hypothetical
           protein POPTR_0006s16720g, partial [Populus trichocarpa]
          Length = 597

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/68 (51%), Positives = 38/68 (55%)
 Frame = -2

Query: 219 ATNSIFHEQMKHIEXXXXXXXXXXXXXXXXLPFVPSKLHIADMFTKAYFASRFRFLSNKL 40
           A NSIFHE+ KHIE                LPFVPS L I D FTKA+  SRF FL  KL
Sbjct: 104 AHNSIFHERTKHIEIDCHLTRHHLKHGTIALPFVPSSLQIVDFFTKAHSISRFCFLVGKL 163

Query: 39  LMLIVVAS 16
            ML+  AS
Sbjct: 164 SMLVAAAS 171


>emb|CAC95126.1| gag-pol polyprotein [Populus deltoides]
          Length = 1382

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/68 (51%), Positives = 39/68 (57%)
 Frame = -2

Query: 219  ATNSIFHEQMKHIEXXXXXXXXXXXXXXXXLPFVPSKLHIADMFTKAYFASRFRFLSNKL 40
            A NS+FHE+ KHIE                LPFVPS L IAD FTKA+  SRF FL  KL
Sbjct: 1315 AHNSVFHERTKHIEIDCHLTRHHLKHGTIALPFVPSSLQIADFFTKAHSISRFCFLVGKL 1374

Query: 39   LMLIVVAS 16
             ML+  AS
Sbjct: 1375 SMLVDAAS 1382


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