BLASTX nr result
ID: Zingiber24_contig00045344
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045344
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_005090373.1| ribosomal protein S3 (mitochondrion) [Phoeni... 171 9e-41
gb|ADI88609.1| ribosomal protein S3 [Dioscorea panthaica] 169 3e-40
gb|ADI88606.1| ribosomal protein S3 [Dioscorea esculenta var. sp... 169 3e-40
gb|ADI88605.1| ribosomal protein S3 [Dioscorea cirrhosa var. cyl... 169 3e-40
gb|ADI88604.1| ribosomal protein S3 [Dioscorea bulbifera] 169 3e-40
gb|ADI88603.1| ribosomal protein S3 [Dioscorea esculenta] 169 3e-40
gb|ADI88602.1| ribosomal protein S3 [Dioscorea caucasica] 169 3e-40
gb|ADI88601.1| ribosomal protein S3 [Dioscorea sansibarensis] 169 3e-40
gb|ADI88600.1| ribosomal protein S3 [Dioscorea elephantipes] 169 3e-40
gb|ADI88599.1| ribosomal protein S3 [Dioscorea persimilis] 169 3e-40
gb|ADI88598.1| ribosomal protein S3 [Dioscorea villosa] 169 3e-40
gb|ADI88597.1| ribosomal protein S3 [Dioscorea tokoro] 169 3e-40
gb|ADI88596.1| ribosomal protein S3 [Dioscorea cotinifolia] 169 3e-40
gb|ADI88595.1| ribosomal protein S3 [Dioscorea nipponica subsp. ... 169 3e-40
gb|ADI88593.1| ribosomal protein S3 [Dioscorea japonica] 169 3e-40
gb|ADI88591.1| ribosomal protein S3 [Dioscorea aspersa] 169 3e-40
gb|ADI88590.1| ribosomal protein S3 [Dioscorea banzhuana] 169 3e-40
gb|ADI88589.1| ribosomal protein S3 [Dioscorea decipiens] 169 3e-40
gb|ADI88588.1| ribosomal protein S3 [Dioscorea alata] 169 3e-40
gb|ADI88586.1| ribosomal protein S3 [Dioscorea yunnanensis] gi|2... 169 3e-40
>ref|YP_005090373.1| ribosomal protein S3 (mitochondrion) [Phoenix dactylifera]
gi|343478426|gb|AEM43914.1| ribosomal protein S3
(mitochondrion) [Phoenix dactylifera]
Length = 564
Score = 171 bits (433), Expect = 9e-41
Identities = 86/92 (93%), Positives = 90/92 (97%), Gaps = 2/92 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+CKIVKDIPLIMPKGVEGIRICCSG
Sbjct: 438 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFCKIVKDIPLIMPKGVEGIRICCSG 497
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPA 272
RLGGAEIARTECGKYGKTSR+VF+QKIDYAPA
Sbjct: 498 RLGGAEIARTECGKYGKTSRNVFHQKIDYAPA 529
>gb|ADI88609.1| ribosomal protein S3 [Dioscorea panthaica]
Length = 485
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 380 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 439
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 440 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 472
>gb|ADI88606.1| ribosomal protein S3 [Dioscorea esculenta var. spinosa]
Length = 487
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 382 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 441
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 442 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 474
>gb|ADI88605.1| ribosomal protein S3 [Dioscorea cirrhosa var. cylindrica]
Length = 478
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 377 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 436
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 437 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 469
>gb|ADI88604.1| ribosomal protein S3 [Dioscorea bulbifera]
Length = 488
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 382 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 441
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 442 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 474
>gb|ADI88603.1| ribosomal protein S3 [Dioscorea esculenta]
Length = 492
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 384 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 443
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 444 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 476
>gb|ADI88602.1| ribosomal protein S3 [Dioscorea caucasica]
Length = 487
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 380 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 439
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 440 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 472
>gb|ADI88601.1| ribosomal protein S3 [Dioscorea sansibarensis]
Length = 490
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 385 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 444
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 445 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 477
>gb|ADI88600.1| ribosomal protein S3 [Dioscorea elephantipes]
Length = 473
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 375 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 434
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 435 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 467
>gb|ADI88599.1| ribosomal protein S3 [Dioscorea persimilis]
Length = 486
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 380 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 439
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 440 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 472
>gb|ADI88598.1| ribosomal protein S3 [Dioscorea villosa]
Length = 461
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 361 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 420
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 421 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 453
>gb|ADI88597.1| ribosomal protein S3 [Dioscorea tokoro]
Length = 478
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 377 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 436
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 437 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 469
>gb|ADI88596.1| ribosomal protein S3 [Dioscorea cotinifolia]
Length = 476
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 374 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 433
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 434 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 466
>gb|ADI88595.1| ribosomal protein S3 [Dioscorea nipponica subsp. rosthornii]
Length = 476
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 376 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 435
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 436 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 468
>gb|ADI88593.1| ribosomal protein S3 [Dioscorea japonica]
Length = 473
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 374 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 433
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 434 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 466
>gb|ADI88591.1| ribosomal protein S3 [Dioscorea aspersa]
Length = 476
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 375 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 434
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 435 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 467
>gb|ADI88590.1| ribosomal protein S3 [Dioscorea banzhuana]
Length = 490
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 383 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 442
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 443 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 475
>gb|ADI88589.1| ribosomal protein S3 [Dioscorea decipiens]
Length = 476
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 376 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 435
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 436 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 468
>gb|ADI88588.1| ribosomal protein S3 [Dioscorea alata]
Length = 477
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 377 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 436
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 437 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 469
>gb|ADI88586.1| ribosomal protein S3 [Dioscorea yunnanensis]
gi|298578227|gb|ADI88587.1| ribosomal protein S3
[Dioscorea nitens]
Length = 485
Score = 169 bits (429), Expect = 3e-40
Identities = 86/93 (92%), Positives = 90/93 (96%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 LIESVKIKSLYQSASLIAQDISFQPRNN--SFRSIYCKIVKDIPLIMPKGVEGIRICCSG 176
LIESVKIKS+YQSASLIAQDISFQPRNN SFRSI+ KIVKDIPLIMPKGVEGIRICCSG
Sbjct: 380 LIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICCSG 439
Query: 177 RLGGAEIARTECGKYGKTSRHVFNQKIDYAPAK 275
RLGGAEIARTECGKYGKTSR+VFNQKIDYAPA+
Sbjct: 440 RLGGAEIARTECGKYGKTSRNVFNQKIDYAPAE 472