BLASTX nr result

ID: Zingiber24_contig00045340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00045340
         (511 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG71001.1| myb-related transcription factor [Musa balbisiana]     85   1e-14
ref|NP_001047474.1| Os02g0624300 [Oryza sativa Japonica Group] g...    59   9e-07
ref|XP_002454197.1| hypothetical protein SORBIDRAFT_04g026480 [S...    57   3e-06

>dbj|BAG71001.1| myb-related transcription factor [Musa balbisiana]
          Length = 249

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 4/129 (3%)
 Frame = +2

Query: 2   RKCQIDTPKFGSKAKAIDRKATR---KPKLDCPSHGPPSPSQSLSETLTTPCTNSSNKMC 172
           R+ + D     S AKA+  +A +   +PKL+ P+  P S  QS SE +++  T SS K  
Sbjct: 127 RRSRSDVEATRSGAKAVKFQALQAAIRPKLESPTPLPVSIDQSYSE-ISSSVTISSTKRG 185

Query: 173 ETSNEDIKEEAIVTPYELSDIDDNMWSDAFFADYDTSWDDSLASFCSFSGNEDG-IDFWM 349
           ET++  IKEE +V+  + SDID N W            DDS ASFCS S  +D  ID+W+
Sbjct: 186 ETNSPGIKEEVVVSSAQFSDIDQNFW-----------LDDSFASFCSSSNKDDDVIDYWL 234

Query: 350 QVFMEAGDL 376
           QVFMEAG L
Sbjct: 235 QVFMEAGHL 243


>ref|NP_001047474.1| Os02g0624300 [Oryza sativa Japonica Group]
           gi|48716240|dbj|BAD23776.1| putative myb protein [Oryza
           sativa Japonica Group] gi|113537005|dbj|BAF09388.1|
           Os02g0624300 [Oryza sativa Japonica Group]
           gi|125540359|gb|EAY86754.1| hypothetical protein
           OsI_08134 [Oryza sativa Indica Group]
           gi|125582935|gb|EAZ23866.1| hypothetical protein
           OsJ_07582 [Oryza sativa Japonica Group]
           gi|215767300|dbj|BAG99528.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 258

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
 Frame = +2

Query: 23  PKFGSKAKAIDRKATRKPK-----LDCPSHGPPSPSQSLSETLTTPCTNSSNKMCETSNE 187
           P  G +A A  RKAT+K       +D P+  P SP QSLS T T+  T         S+ 
Sbjct: 120 PSSGREAAAPKRKATKKAAAVAVAIDVPTTVPVSPEQSLSTTTTSAATTEEYSYSMASSA 179

Query: 188 DIKEEAIVTPYELSDIDDNMWSDAFFADYDT-------SWDDSL---ASFCSFSGNEDGI 337
           D       T  E   IDD+ WS+      D+       S  D L    +  S S ++D  
Sbjct: 180 DHNTTDSFTSEEEFQIDDSFWSETLAMTVDSTDSGMEMSGGDPLGAGGASPSSSNDDDMD 239

Query: 338 DFWMQVFMEAGDL 376
           DFW+++F++AG +
Sbjct: 240 DFWLKLFIQAGGM 252


>ref|XP_002454197.1| hypothetical protein SORBIDRAFT_04g026480 [Sorghum bicolor]
           gi|241934028|gb|EES07173.1| hypothetical protein
           SORBIDRAFT_04g026480 [Sorghum bicolor]
          Length = 258

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
 Frame = +2

Query: 23  PKFGSKAKAIDRKATRKPKLDCPSHG---PPSPSQSLSETLTTPCTNSSNKMCETSNED- 190
           PK   K +    + T    L+ P+ G   P SP QSLS + T+  T+ S      +N D 
Sbjct: 127 PKRKPKKQQQQPETTAVTALEGPTTGAVVPVSPEQSLSTSTTSTTTDYSAASSMENNADS 186

Query: 191 -IKEEAIVTPYELSDIDDNMWSDAFFADYDTSWDDSLASFCSFSG--------NEDGIDF 343
              EE     Y+   IDD+ WS+      D+S D  + +  +F G        N+D +DF
Sbjct: 187 STSEEEEEEDYQ---IDDSFWSETLAMTVDSSDDSGMQA--AFGGAPSSVTSTNDDDMDF 241

Query: 344 WMQVFMEAGDL 376
           W+++FM+AGD+
Sbjct: 242 WLKLFMQAGDM 252


Top