BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00045330
         (554 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...    81   2e-13
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...    81   2e-13
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...    80   3e-13
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    80   4e-13
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu...    79   6e-13
gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus pe...    79   9e-13
gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobrom...    78   2e-12
ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    77   3e-12
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    74   2e-11
gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus pe...    72   7e-11
emb|CBL87031.1| RNA polymerase [Nuphar advena]                         72   7e-11
emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]       72   7e-11
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...    71   2e-10
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    71   2e-10
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...    70   3e-10
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...    70   3e-10
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...    70   3e-10
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...    70   3e-10
gb|ABD96891.1| hypothetical protein [Cleome spinosa]                   69   7e-10
ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Popu...    68   1e-09

>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
           sylvestris] gi|17221595|dbj|BAB78465.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 61/164 (37%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
 Frame = +1

Query: 91  GFLQKSSFSEKNRVWDLEE-TLENRVGGFFQNGE--------SMPLAGCACPSIAADLKT 243
           GF Q S F +  +   L   +  N V GF   GE        S PL      +     K+
Sbjct: 64  GFGQDSIFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKS 123

Query: 244 HASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFS-RFRSARLFQHYSK 420
           +ASVAE  A + TD E        S++D + +    L+ EE K F+ R R  R+      
Sbjct: 124 YASVAEAVAVSSTDAEEDV-----SVVDEVHELLTELKKEEKKQFAFRRRKQRM------ 172

Query: 421 LVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
           L  GM    Y  L+RRQ+++E+EAWEQA KEYKE+L DMC++KL
Sbjct: 173 LTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKL 216


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
           AltName: Full=T7 bacteriophage-type single subunit RNA
           polymerase 2; Flags: Precursor
           gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
           [Nicotiana sylvestris]
          Length = 1020

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 61/164 (37%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
 Frame = +1

Query: 91  GFLQKSSFSEKNRVWDLEE-TLENRVGGFFQNGE--------SMPLAGCACPSIAADLKT 243
           GF Q S F +  +   L   +  N V GF   GE        S PL      +     K+
Sbjct: 64  GFGQDSIFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKS 123

Query: 244 HASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFS-RFRSARLFQHYSK 420
           +ASVAE  A + TD E        S++D + +    L+ EE K F+ R R  R+      
Sbjct: 124 YASVAEAVAVSSTDAEEDV-----SVVDEVHELLTELKKEEKKQFAFRRRKQRM------ 172

Query: 421 LVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
           L  GM    Y  L+RRQ+++E+EAWEQA KEYKE+L DMC++KL
Sbjct: 173 LTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKL 216


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial; AltName:
           Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
           single subunit RNA polymerase 2B; Flags: Precursor
           gi|21425665|emb|CAC95020.1| mitochondrial and
           chloroplast RNA polymerase [Nicotiana tabacum]
          Length = 1021

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 60/165 (36%), Positives = 83/165 (50%), Gaps = 11/165 (6%)
 Frame = +1

Query: 91  GFLQKSSFSEKNRVWDLEE-TLENRVGGFFQNGESMP---------LAGCACPSIAADLK 240
           GF Q S F +  +   L   +  N V GF   GE +P         L      +     K
Sbjct: 64  GFGQDSVFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLLKNQVNSNDFCCRK 123

Query: 241 THASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFS-RFRSARLFQHYS 417
           ++ASVAE  A + TD E        S++D + +    L+ EE K F+ R R  R+     
Sbjct: 124 SYASVAEAVAVSSTDAEEDV-----SVVDEVQELLTELKKEEKKQFAFRRRKQRM----- 173

Query: 418 KLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
            L  GM    Y  L+RRQ+++E+EAWEQA KEYKE+L DMC++KL
Sbjct: 174 -LTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKL 217


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|298204431|emb|CBI16911.3| unnamed protein product
           [Vitis vinifera]
          Length = 1035

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 44/105 (41%), Positives = 65/105 (61%)
 Frame = +1

Query: 238 KTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQHYS 417
           K++ASVAE  +STD +E+ S+    + +L  + K       EE +  +  R  +L     
Sbjct: 136 KSYASVAEAVSSTDVEEDVSASDEIQELLGEMKK-------EEKRQVNFKRREKL----- 183

Query: 418 KLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
           K+  GM +  Y +LRRRQ++IE+EAWE A KEYKE+L DMC++KL
Sbjct: 184 KMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKL 228


>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
           gi|550340797|gb|ERP62048.1| hypothetical protein
           POPTR_0004s11060g [Populus trichocarpa]
          Length = 475

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 61/168 (36%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
 Frame = +1

Query: 94  FLQKSSFSEKN---------RVWDLEETLENRVG----GFFQNGESMPLAGCA--CPSIA 228
           F +KS F   N         R+ ++  T E+ +G    GF +NG+S     C+  CP   
Sbjct: 75  FFEKSKFHSVNNSSPQLCFRRIGEIS-THEDYMGKPSFGFLRNGDSSNGNLCSGLCP--- 130

Query: 229 ADLKTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQ 408
              + + SVAE  +STD ++        + +L    K E     E++K F R R      
Sbjct: 131 ---RGYVSVAEAVSSTDVEDNVVVDEELQELLQDTRKEE-----EKEKDFRRRRRL---- 178

Query: 409 HYSKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
           H ++   GM    Y  LRRRQ++IE+EAWEQA KEYKE+LKDMC+ KL
Sbjct: 179 HANR---GMGSGKYKALRRRQVKIEAEAWEQAAKEYKELLKDMCEHKL 223


>gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
          Length = 1006

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 15/168 (8%)
 Frame = +1

Query: 94  FLQKSSFSEKNRVWDLEETLENR--VGGFFQNGESMP----LAGCAC--PSIAADL---- 237
           F Q+SSF +K R ++  + + NR  V GF Q G+       L  C+   PS    +    
Sbjct: 32  FSQESSFLDKARHFEARKCINNRILVMGFRQVGDMASQKEELGRCSSLNPSYPYGISGFC 91

Query: 238 ---KTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQ 408
              K +ASVAE  ASTD +E++S     + +L+ + +    +E               F+
Sbjct: 92  NYAKGYASVAEAIASTDGEEDSSGSEEIQEMLEDLIRENNMVESH-------------FK 138

Query: 409 HYSKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
              ++V GM    Y  LR+RQI++E+EAW++A KEY+E+L DMC++KL
Sbjct: 139 QPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLADMCEQKL 186


>gb|EOY03847.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1100

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
 Frame = +1

Query: 205 GCA--CPSIAADLKTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSF 378
           GC+  CP      + + SVAE  +STD +E+ S +   + +LD + K +        ++ 
Sbjct: 127 GCSGLCP------RGYVSVAEAVSSTDVEEDVSVVEEIKELLDEMKKEQ------RRETG 174

Query: 379 SRFRSARLFQHYSKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
           +R R  ++ +       GM ES Y  LRRRQ++IE+EAWEQA KEY+E+L DMC+ KL
Sbjct: 175 NRRRRCQIIER------GMGESKYRFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKL 226


>ref|XP_004491959.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like isoform X3 [Cicer
           arietinum]
          Length = 1053

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 42/111 (37%), Positives = 67/111 (60%)
 Frame = +1

Query: 220 SIAADLKTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSAR 399
           S   D K ++SVAE  +STD +EE + +   + +LD + +       EE +   +    +
Sbjct: 142 SFRFDAKGYSSVAEAVSSTDAEEELAPVDKIQELLDEMKR-------EEMRKKRQIAECK 194

Query: 400 LFQHYSKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
           L ++   L  GM+E  Y +LR+RQ++ E+E WE+A KEYKE+L DMC++KL
Sbjct: 195 L-KNGVNLRNGMAEGKYKELRKRQVKTETEVWEEAAKEYKELLMDMCEQKL 244


>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 1262

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
 Frame = +1

Query: 91  GFLQKSSFSEKNRVWDLEETLENRVGGFFQNGESMPLAGCA--CPSIAADLKTHASVAEM 264
           GF Q+S F +   +     TL   VG    +    P  G +  CP   A +    S  + 
Sbjct: 321 GFCQRSDFFQHPILVSSCSTL---VGSCQIDHMQRPSFGFSDFCPKGYASVAEAISSTDA 377

Query: 265 AASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQHYSKLVGGMSES 444
           ++STD +EE   +   + IL  + K        EDK  S +R    ++     V GM E 
Sbjct: 378 SSSTDAEEEVCVVDELQEILKEMKK--------EDKRQSAYR----WRIEQARVRGMGEG 425

Query: 445 NYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
            Y  LRRRQI+IE+EAWE+A  EY+E+L DMC++KL
Sbjct: 426 KYLMLRRRQIKIETEAWERAADEYRELLMDMCEQKL 461


>gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 41/105 (39%), Positives = 67/105 (63%)
 Frame = +1

Query: 238 KTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQHYS 417
           K +ASVAE  +STD +EE S +   + +L ++          E+K  ++++  R  Q+ +
Sbjct: 128 KGYASVAEAVSSTDVEEEVSVVDEVQELLQQMSI--------EEKREAQYKQ-RTRQNRA 178

Query: 418 KLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
           +   GM +  Y  L+RRQI+IE+EAWE+A KEY+E++ DMC++KL
Sbjct: 179 R---GMGQGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKL 220


>emb|CBL87031.1| RNA polymerase [Nuphar advena]
          Length = 990

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
 Frame = +1

Query: 67  PSISGFHHGFLQKSSFSEKNRVWDLEETLENRVGGFFQNGESMPLAGCACPSI----AAD 234
           P I GF  G  +  S   K+ + DL       VG + ++ E+     C         A +
Sbjct: 44  PFILGFRDGCSEMRSRRYKDSMLDLGV---RGVGLYRRSVENQASFLCFLDDDFRRRAGE 100

Query: 235 LKTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQHY 414
           ++  ASVAE  +STD  E+TS++   + +++R  + EV  E E +     FR  R  +  
Sbjct: 101 MQGFASVAEAVSSTD--EDTSAIEEIKGLVERFSE-EVFKEKEGE-----FRGKRRTKF- 151

Query: 415 SKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
               G +  + Y  L+RRQI+IE+EAWEQA KEYKE++ DMC  KL
Sbjct: 152 ----GNLGYAKYNALKRRQIKIETEAWEQAAKEYKELMMDMCKNKL 193


>emb|CAC80138.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 1036

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
 Frame = +1

Query: 82  FHHGFLQKSSFSEKNRVWDLEETLENRVGGFFQNGESMPLAGCACPSIAADL---KTHAS 252
           F  GF +  SFSE     +    ++  +G         P++GC    +  ++   K +AS
Sbjct: 87  FELGFCKNRSFSEVGFCREGGSLVKEGIG-------ERPVSGCLGNRLNFNVVCPKGYAS 139

Query: 253 VAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQHYSKLVGG 432
           V E    + TD E        S+ D I   E+  E  +++  +++R +   Q   K+V G
Sbjct: 140 VVEAEVDSSTDLEDDV-----SVFDEIQ--ELVEEMRKEEKRAKWRESH--QRQQKMVAG 190

Query: 433 MSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
           M    Y KLR RQI++E+E+W+QA  EYKE+L DMC  KL
Sbjct: 191 MPLYKYQKLRNRQIKLETESWQQAANEYKELLADMCKLKL 230


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
 Frame = +1

Query: 238 KTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFS-RFRSARLFQHY 414
           K++ASVAE  A + TD E        S++  + +    L+ EE K F+ R R+ RL    
Sbjct: 121 KSYASVAEAVAVSSTDAEEDV-----SVVGEVQELLTELKKEEKKQFTFRRRNQRL---- 171

Query: 415 SKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
             L  G+    Y  L+RRQ++IE++AWE A KEY+E+L DMC++KL
Sbjct: 172 --LTSGIDRRKYPALKRRQVKIETQAWELAAKEYRELLFDMCEQKL 215


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
 Frame = +1

Query: 238 KTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFS-RFRSARLFQHY 414
           K +ASVAE  A + TD E        S++  + +    L+ EE K F+ R R  R+    
Sbjct: 124 KNYASVAEAVAVSSTDAEEDV-----SVVGEVQELLTELKKEEKKQFTFRRRKQRM---- 174

Query: 415 SKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
             L  G+    Y  L RRQ++IE++AWEQA KEY+E+L DMC++KL
Sbjct: 175 --LTSGIDRRKYPALMRRQVKIETQAWEQAAKEYRELLFDMCEQKL 218


>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533046|gb|ESR44229.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 41/103 (39%), Positives = 59/103 (57%)
 Frame = +1

Query: 244 HASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQHYSKL 423
           +A+VAE  +STD +E+ S +   + +L  + K E   E E     +R R AR        
Sbjct: 132 YATVAEAVSSTDVEEDVSIVEEIQELLQEMKK-EEQREGENGGGRNRRRVAR-------- 182

Query: 424 VGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
             GM    Y  L+ RQ++IE+EAWEQA  EY+E+L DMC++KL
Sbjct: 183 --GMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKL 223


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533045|gb|ESR44228.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 41/103 (39%), Positives = 59/103 (57%)
 Frame = +1

Query: 244 HASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQHYSKL 423
           +A+VAE  +STD +E+ S +   + +L  + K E   E E     +R R AR        
Sbjct: 132 YATVAEAVSSTDVEEDVSIVEEIQELLQEMKK-EEQREGENGGGRNRRRVAR-------- 182

Query: 424 VGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
             GM    Y  L+ RQ++IE+EAWEQA  EY+E+L DMC++KL
Sbjct: 183 --GMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKL 223


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533044|gb|ESR44227.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 41/103 (39%), Positives = 59/103 (57%)
 Frame = +1

Query: 244 HASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEEDKSFSRFRSARLFQHYSKL 423
           +A+VAE  +STD +E+ S +   + +L  + K E   E E     +R R AR        
Sbjct: 132 YATVAEAVSSTDVEEDVSIVEEIQELLQEMKK-EEQREGENGGGRNRRRVAR-------- 182

Query: 424 VGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRKL 552
             GM    Y  L+ RQ++IE+EAWEQA  EY+E+L DMC++KL
Sbjct: 183 --GMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKL 223


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
           [Solanum lycopersicum]
          Length = 993

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 60/181 (33%), Positives = 84/181 (46%), Gaps = 10/181 (5%)
 Frame = +1

Query: 40  FYSGRPLSIPSISGFHH---GFLQKSSFSE---KNRVWD--LEETLENRVGGFFQNGESM 195
           F   RPL      G+ +   G  Q S FS    K+R  D   E++  N   GF ++    
Sbjct: 29  FRKTRPLQGLCEEGYRNPNLGVSQSSIFSRVNGKSRCLDGMCEDSCRNHYLGFSESSIFS 88

Query: 196 PLAGC--ACPSIAADLKTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTLECEED 369
            + G    C S+   L+++ S AE  AST  ++           +D I +       EE 
Sbjct: 89  RVKGDFRVCGSLGV-LRSYGSAAEAIASTSEED-----------IDEIQEL-----IEEM 131

Query: 370 KSFSRFRSARLFQHYSKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKDMCDRK 549
              +      L     K VGGM    Y  LRRRQI++E+EAWE A KEY+E+L DMC++K
Sbjct: 132 NKENEALKTNLQPKQPKTVGGMGIGKYNLLRRRQIKVETEAWEDAAKEYQELLMDMCEQK 191

Query: 550 L 552
           L
Sbjct: 192 L 192


>gb|ABD96891.1| hypothetical protein [Cleome spinosa]
          Length = 1021

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
 Frame = +1

Query: 4   RKSACISPRGVRFYSGRPLSIPSISGFHH---GFLQKSSFSEKNRVWDLEETLENRVGGF 174
           R S C   RG+  +S   +  P I  F     G +  S F +         T E    G 
Sbjct: 55  RLSVCRQSRGLLGFSSESI-FPEIFIFRPSVIGPISSSGFHDMG----YSRTCEIPAPGD 109

Query: 175 FQNGESMPLAGCACPSIAADLKTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFEVTL 354
           F            C       +++ + AE  +STD +E+ S       ++D + +    +
Sbjct: 110 FSGRPGFGFLKDECCFHRFSPRSYVNAAEAVSSTDIEEDAS-------VVDEVQELLREM 162

Query: 355 ECEEDKSFSRFRSARLFQHYSKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEMLKD 534
           + EE K     R  +  +       GM E  Y  L+RRQ++IE+EAWE+A  EYKE+L D
Sbjct: 163 KKEEKKEKVHLRRVKRQEDL-----GMLEKKYQSLKRRQVKIETEAWEKAANEYKELLTD 217

Query: 535 MCDRKL 552
           MC++KL
Sbjct: 218 MCEQKL 223


>ref|XP_006373532.1| hypothetical protein POPTR_0017s14590g [Populus trichocarpa]
           gi|550320354|gb|ERP51329.1| hypothetical protein
           POPTR_0017s14590g [Populus trichocarpa]
          Length = 987

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
 Frame = +1

Query: 172 FFQNGESMPLAGCA--CPSIAADLKTHASVAEMAASTDTDEETSSLLNFRSILDRIGKFE 345
           F +N +S     CA  CP      + + SV E  +STD ++        + +L  + K E
Sbjct: 76  FLRNSDSTNGNRCAGFCP------RGYVSVVEAVSSTDVEDNVYGADEVQELLPEMRKEE 129

Query: 346 VTLECEEDKSFSRFRSARLFQHYSKLVGGMSESNYCKLRRRQIQIESEAWEQATKEYKEM 525
                E+++ F R   A           G+    +  LRRRQ++IE+EAWE ATKEYKE+
Sbjct: 130 -----EKEEHFRRRLHAN---------PGIGSRKHRVLRRRQVKIEAEAWELATKEYKEL 175

Query: 526 LKDMCDRKL 552
           LKDMC+ KL
Sbjct: 176 LKDMCEHKL 184