BLASTX nr result
ID: Zingiber24_contig00045250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045250
(251 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY20132.1| Pseudouridine synthase isoform 3 [Theobroma cacao] 89 6e-16
gb|EOY20131.1| Pseudouridine synthase family protein isoform 2 [... 89 6e-16
gb|EOY20130.1| Pseudouridine synthase isoform 1 [Theobroma cacao] 89 6e-16
ref|XP_004290464.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 89 8e-16
gb|EMJ01398.1| hypothetical protein PRUPE_ppa015936mg, partial [... 88 1e-15
ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ... 87 2e-15
ref|XP_006589475.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 86 5e-15
ref|XP_006589474.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 86 5e-15
ref|XP_006589473.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 86 5e-15
ref|XP_006589472.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 86 5e-15
ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 86 5e-15
ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 86 5e-15
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 86 5e-15
ref|XP_002302151.1| tRNA pseudouridine synthase family protein [... 86 5e-15
gb|EXB37798.1| tRNA pseudouridine(38/39) synthase [Morus notabilis] 85 9e-15
ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244... 85 1e-14
emb|CBI29343.3| unnamed protein product [Vitis vinifera] 85 1e-14
ref|XP_006359054.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 84 1e-14
ref|XP_004237844.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 84 3e-14
ref|XP_004141002.1| PREDICTED: tRNA pseudouridine(38/39) synthas... 83 3e-14
>gb|EOY20132.1| Pseudouridine synthase isoform 3 [Theobroma cacao]
Length = 363
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/57 (70%), Positives = 52/57 (91%)
Frame = +2
Query: 80 LQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
L+ + H ++RYVALK+MYFG+RFYGFASEAQMDPT+ESEIFKALE+T+L+VG K+ +
Sbjct: 91 LEIMTHHSKRYVALKVMYFGKRFYGFASEAQMDPTVESEIFKALEKTRLLVGDKKES 147
>gb|EOY20131.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
Length = 478
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/57 (70%), Positives = 52/57 (91%)
Frame = +2
Query: 80 LQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
L+ + H ++RYVALK+MYFG+RFYGFASEAQMDPT+ESEIFKALE+T+L+VG K+ +
Sbjct: 91 LEIMTHHSKRYVALKVMYFGKRFYGFASEAQMDPTVESEIFKALEKTRLLVGDKKES 147
>gb|EOY20130.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
Length = 445
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/57 (70%), Positives = 52/57 (91%)
Frame = +2
Query: 80 LQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
L+ + H ++RYVALK+MYFG+RFYGFASEAQMDPT+ESEIFKALE+T+L+VG K+ +
Sbjct: 91 LEIMTHHSKRYVALKVMYFGKRFYGFASEAQMDPTVESEIFKALEKTRLLVGDKKES 147
>ref|XP_004290464.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Fragaria vesca
subsp. vesca]
Length = 432
Score = 88.6 bits (218), Expect = 8e-16
Identities = 43/79 (54%), Positives = 59/79 (74%), Gaps = 8/79 (10%)
Frame = +2
Query: 38 KLMLMNSETGEEPGLQK--------IHHPARRYVALKIMYFGQRFYGFASEAQMDPTIES 193
KL N +T E +K ++H ++RYVALK+MYFG+RFYGFA+EAQMDPT+ES
Sbjct: 52 KLSFQNKKTIREKVKEKFPGYDTRIMNHHSKRYVALKVMYFGRRFYGFAAEAQMDPTVES 111
Query: 194 EIFKALERTKLMVGTKEST 250
EIFKALE+T+L++G K+ +
Sbjct: 112 EIFKALEKTRLLIGDKKES 130
>gb|EMJ01398.1| hypothetical protein PRUPE_ppa015936mg, partial [Prunus persica]
Length = 250
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/54 (72%), Positives = 50/54 (92%)
Frame = +2
Query: 89 IHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
++H +RYVALK+MYFG+RFYGFA+EAQMDPTIESEIFKALE+T+L+VG K+ +
Sbjct: 76 MNHHCKRYVALKVMYFGRRFYGFAAEAQMDPTIESEIFKALEKTRLLVGDKKES 129
>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 438
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/52 (73%), Positives = 48/52 (92%)
Frame = +2
Query: 89 IHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKE 244
++H +RYVALK+MYFGQRFYGF+SE QMDPT+ESEIFKALERT+L++G K+
Sbjct: 96 MNHHLKRYVALKVMYFGQRFYGFSSEGQMDPTVESEIFKALERTRLLIGDKK 147
>ref|XP_006589475.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X7
[Glycine max]
Length = 320
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/52 (71%), Positives = 48/52 (92%)
Frame = +2
Query: 95 HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ +
Sbjct: 78 HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKES 129
>ref|XP_006589474.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X6
[Glycine max]
Length = 366
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/52 (71%), Positives = 48/52 (92%)
Frame = +2
Query: 95 HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ +
Sbjct: 78 HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKES 129
>ref|XP_006589473.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X5
[Glycine max]
Length = 406
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/52 (71%), Positives = 48/52 (92%)
Frame = +2
Query: 95 HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ +
Sbjct: 58 HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKES 109
>ref|XP_006589472.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X4
[Glycine max]
Length = 415
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/52 (71%), Positives = 48/52 (92%)
Frame = +2
Query: 95 HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ +
Sbjct: 78 HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKES 129
>ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X3
[Glycine max]
Length = 420
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/52 (71%), Positives = 48/52 (92%)
Frame = +2
Query: 95 HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ +
Sbjct: 78 HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKES 129
>ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
[Glycine max]
Length = 425
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/52 (71%), Positives = 48/52 (92%)
Frame = +2
Query: 95 HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ +
Sbjct: 78 HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKES 129
>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
[Glycine max]
Length = 426
Score = 85.9 bits (211), Expect = 5e-15
Identities = 37/52 (71%), Positives = 48/52 (92%)
Frame = +2
Query: 95 HPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
H +RRYVALK+MYFG+RFYGFASEAQM+PT+ESE+FKA E+T+L+VG K+ +
Sbjct: 78 HHSRRYVALKVMYFGKRFYGFASEAQMEPTVESELFKAFEKTRLLVGNKKES 129
>ref|XP_002302151.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
gi|222843877|gb|EEE81424.1| tRNA pseudouridine synthase
family protein [Populus trichocarpa]
Length = 465
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/51 (76%), Positives = 47/51 (92%)
Frame = +2
Query: 92 HHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKE 244
HHP RRYVALK+MYFGQRFYGF+ EAQMDPT+ESEIFKALE T+L++G ++
Sbjct: 89 HHP-RRYVALKVMYFGQRFYGFSLEAQMDPTVESEIFKALETTRLLIGDRK 138
>gb|EXB37798.1| tRNA pseudouridine(38/39) synthase [Morus notabilis]
Length = 448
Score = 85.1 bits (209), Expect = 9e-15
Identities = 37/54 (68%), Positives = 49/54 (90%)
Frame = +2
Query: 89 IHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
++H +RYVALK+MYFGQRFYGFASEAQMDPT+ESE+F AL++T+L+VG K+ +
Sbjct: 68 MNHQCKRYVALKLMYFGQRFYGFASEAQMDPTVESELFGALKKTRLLVGDKKES 121
>ref|XP_002264487.2| PREDICTED: uncharacterized protein LOC100244254 [Vitis vinifera]
Length = 1576
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/62 (66%), Positives = 52/62 (83%), Gaps = 2/62 (3%)
Frame = +2
Query: 65 GEEPG--LQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGT 238
G+ PG ++ ++H ++RYVALK+MYFG RFYGFASEA MDPT+ESEIFKALE+T L VG
Sbjct: 119 GKIPGTNMRTMNHISKRYVALKVMYFGPRFYGFASEAHMDPTVESEIFKALEKTWLAVGD 178
Query: 239 KE 244
K+
Sbjct: 179 KK 180
>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 84.7 bits (208), Expect = 1e-14
Identities = 41/62 (66%), Positives = 52/62 (83%), Gaps = 2/62 (3%)
Frame = +2
Query: 65 GEEPG--LQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGT 238
G+ PG ++ ++H ++RYVALK+MYFG RFYGFASEA MDPT+ESEIFKALE+T L VG
Sbjct: 85 GKIPGTNMRTMNHISKRYVALKVMYFGPRFYGFASEAHMDPTVESEIFKALEKTWLAVGD 144
Query: 239 KE 244
K+
Sbjct: 145 KK 146
>ref|XP_006359054.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Solanum
tuberosum]
Length = 481
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +2
Query: 77 GLQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKE 244
G + H ++RYVALK+MYFG RFYGFASEAQMDPT+E EIFKALERT+L+ G K+
Sbjct: 68 GYGAMMHHSKRYVALKVMYFGLRFYGFASEAQMDPTVEGEIFKALERTRLIFGDKK 123
>ref|XP_004237844.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Solanum
lycopersicum]
Length = 420
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/56 (67%), Positives = 47/56 (83%)
Frame = +2
Query: 77 GLQKIHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKE 244
G + H ++RYVALK+MYFG RFYGFASEAQMDPT+E E+FKALERT+L+ G K+
Sbjct: 68 GYGAMMHHSKRYVALKVMYFGLRFYGFASEAQMDPTVEGELFKALERTRLIFGDKK 123
>ref|XP_004141002.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Cucumis
sativus]
Length = 455
Score = 83.2 bits (204), Expect = 3e-14
Identities = 35/54 (64%), Positives = 49/54 (90%)
Frame = +2
Query: 89 IHHPARRYVALKIMYFGQRFYGFASEAQMDPTIESEIFKALERTKLMVGTKEST 250
+ H ++RY+ALK+MYFGQRFYGFASEAQM+PT+ESEIF+ALE+ +L+VG ++ +
Sbjct: 106 LDHCSKRYIALKVMYFGQRFYGFASEAQMEPTVESEIFRALEKARLLVGGRKES 159