BLASTX nr result
ID: Zingiber24_contig00045117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045117
(242 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231275.1| PREDICTED: uncharacterized protein LOC101266... 106 4e-21
ref|XP_006344628.1| PREDICTED: DNA polymerase zeta catalytic sub... 104 1e-20
ref|XP_006344627.1| PREDICTED: DNA polymerase zeta catalytic sub... 104 1e-20
gb|EMJ07643.1| hypothetical protein PRUPE_ppa000111mg [Prunus pe... 102 5e-20
ref|XP_006300642.1| hypothetical protein CARUB_v10019649mg [Caps... 102 7e-20
ref|XP_006300641.1| hypothetical protein CARUB_v10019649mg [Caps... 102 7e-20
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263... 102 7e-20
emb|CBI36804.3| unnamed protein product [Vitis vinifera] 102 7e-20
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from... 101 1e-19
gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic ... 101 1e-19
ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thalia... 101 1e-19
ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis tha... 101 1e-19
ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arab... 100 2e-19
gb|EOY11311.1| Recovery protein 3 isoform 3 [Theobroma cacao] gi... 99 4e-19
gb|EOY11310.1| Recovery protein 3 isoform 2, partial [Theobroma ... 99 4e-19
gb|EOY11309.1| Recovery protein 3 isoform 1 [Theobroma cacao] 99 4e-19
ref|XP_006391268.1| hypothetical protein EUTSA_v10017996mg [Eutr... 99 6e-19
gb|EEC82654.1| hypothetical protein OsI_27267 [Oryza sativa Indi... 99 8e-19
ref|XP_006577241.1| PREDICTED: DNA polymerase zeta catalytic sub... 98 1e-18
ref|XP_006577240.1| PREDICTED: DNA polymerase zeta catalytic sub... 98 1e-18
>ref|XP_004231275.1| PREDICTED: uncharacterized protein LOC101266467 [Solanum
lycopersicum]
Length = 2734
Score = 106 bits (264), Expect = 4e-21
Identities = 54/72 (75%), Positives = 60/72 (83%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ ISGPD K LTPLSQ GF DPASIGCGQQLTI+S+EVQA SRGDLRPDP+FD
Sbjct: 1046 SQDLSQ--ISGPDRKSRLTPLSQTGFRDPASIGCGQQLTILSLEVQAESRGDLRPDPRFD 1103
Query: 181 EINMIALVVQED 216
+ +I LV QED
Sbjct: 1104 AVRIIVLVFQED 1115
>ref|XP_006344628.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X2
[Solanum tuberosum]
Length = 1747
Score = 104 bits (259), Expect = 1e-20
Identities = 53/72 (73%), Positives = 59/72 (81%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ ISGPD K LTPLSQ GF DPASIGCGQQLT +S+EVQA SRGDLRPDP+FD
Sbjct: 854 SQDLSQ--ISGPDRKSRLTPLSQTGFRDPASIGCGQQLTKLSIEVQAESRGDLRPDPRFD 911
Query: 181 EINMIALVVQED 216
+ +I LV QED
Sbjct: 912 AVRIIVLVFQED 923
>ref|XP_006344627.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X1
[Solanum tuberosum]
Length = 1976
Score = 104 bits (259), Expect = 1e-20
Identities = 53/72 (73%), Positives = 59/72 (81%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ ISGPD K LTPLSQ GF DPASIGCGQQLT +S+EVQA SRGDLRPDP+FD
Sbjct: 1083 SQDLSQ--ISGPDRKSRLTPLSQTGFRDPASIGCGQQLTKLSIEVQAESRGDLRPDPRFD 1140
Query: 181 EINMIALVVQED 216
+ +I LV QED
Sbjct: 1141 AVRIIVLVFQED 1152
>gb|EMJ07643.1| hypothetical protein PRUPE_ppa000111mg [Prunus persica]
Length = 1771
Score = 102 bits (254), Expect = 5e-20
Identities = 52/73 (71%), Positives = 60/73 (82%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD SQISGPD + TPLSQIGF DPAS+G GQQLT++SVEVQA SRGDLRPDP+FD
Sbjct: 876 SQD--SSQISGPDGRSKPTPLSQIGFRDPASVGGGQQLTLLSVEVQAESRGDLRPDPRFD 933
Query: 181 EINMIALVVQEDS 219
IN+I+L +Q DS
Sbjct: 934 AINLISLAIQNDS 946
>ref|XP_006300642.1| hypothetical protein CARUB_v10019649mg [Capsella rubella]
gi|482569352|gb|EOA33540.1| hypothetical protein
CARUB_v10019649mg [Capsella rubella]
Length = 1900
Score = 102 bits (253), Expect = 7e-20
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQISGPD K TPLSQIGF DPAS+G GQQLT++S+EV A SRGDLRPDP+FD +N+IA
Sbjct: 1012 SQISGPDGKSGPTPLSQIGFQDPASMGAGQQLTVLSIEVHAESRGDLRPDPRFDSVNVIA 1071
Query: 199 LVVQED 216
LVVQ D
Sbjct: 1072 LVVQND 1077
>ref|XP_006300641.1| hypothetical protein CARUB_v10019649mg [Capsella rubella]
gi|482569351|gb|EOA33539.1| hypothetical protein
CARUB_v10019649mg [Capsella rubella]
Length = 1716
Score = 102 bits (253), Expect = 7e-20
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQISGPD K TPLSQIGF DPAS+G GQQLT++S+EV A SRGDLRPDP+FD +N+IA
Sbjct: 828 SQISGPDGKSGPTPLSQIGFQDPASMGAGQQLTVLSIEVHAESRGDLRPDPRFDSVNVIA 887
Query: 199 LVVQED 216
LVVQ D
Sbjct: 888 LVVQND 893
>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
Length = 2002
Score = 102 bits (253), Expect = 7e-20
Identities = 50/79 (63%), Positives = 64/79 (81%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ ISGP+ K TPLSQIGF DPAS+G GQQ+T++S+E+QA SRGDLRPDP++D
Sbjct: 280 SQDISQ--ISGPEEKSKPTPLSQIGFRDPASVGGGQQVTLLSIEIQAESRGDLRPDPRYD 337
Query: 181 EINMIALVVQEDSCQSLAV 237
IN+I L++QED +L V
Sbjct: 338 AINVIVLLIQEDDDSALEV 356
>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
Length = 1732
Score = 102 bits (253), Expect = 7e-20
Identities = 50/79 (63%), Positives = 64/79 (81%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ ISGP+ K TPLSQIGF DPAS+G GQQ+T++S+E+QA SRGDLRPDP++D
Sbjct: 866 SQDISQ--ISGPEEKSKPTPLSQIGFRDPASVGGGQQVTLLSIEIQAESRGDLRPDPRYD 923
Query: 181 EINMIALVVQEDSCQSLAV 237
IN+I L++QED +L V
Sbjct: 924 AINVIVLLIQEDDDSALEV 942
>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae
[Arabidopsis thaliana]
Length = 1894
Score = 101 bits (251), Expect = 1e-19
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQISGPD K TPLSQ+GF DPAS+G GQQLTI+S+EV A SRGDLRPDP+FD +N+IA
Sbjct: 1006 SQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIA 1065
Query: 199 LVVQED 216
LVVQ D
Sbjct: 1066 LVVQND 1071
>gb|AAG52299.1|AC011020_6 putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
Length = 1871
Score = 101 bits (251), Expect = 1e-19
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQISGPD K TPLSQ+GF DPAS+G GQQLTI+S+EV A SRGDLRPDP+FD +N+IA
Sbjct: 1006 SQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIA 1065
Query: 199 LVVQED 216
LVVQ D
Sbjct: 1066 LVVQND 1071
>ref|NP_176917.2| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|75138548|sp|Q766Z3.1|REV3_ARATH RecName: Full=DNA
polymerase zeta catalytic subunit; AltName: Full=Protein
reversionless 3-like; Short=AtREV3
gi|34330129|dbj|BAC82450.1| catalytic subunit of
polymerase zeta [Arabidopsis thaliana]
gi|332196534|gb|AEE34655.1| DNA polymerase zeta subunit
[Arabidopsis thaliana]
Length = 1890
Score = 101 bits (251), Expect = 1e-19
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQISGPD K TPLSQ+GF DPAS+G GQQLTI+S+EV A SRGDLRPDP+FD +N+IA
Sbjct: 1002 SQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIA 1061
Query: 199 LVVQED 216
LVVQ D
Sbjct: 1062 LVVQND 1067
>ref|NP_001185344.1| DNA polymerase zeta subunit [Arabidopsis thaliana]
gi|332196535|gb|AEE34656.1| DNA polymerase zeta subunit
[Arabidopsis thaliana]
Length = 1916
Score = 101 bits (251), Expect = 1e-19
Identities = 49/66 (74%), Positives = 56/66 (84%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQISGPD K TPLSQ+GF DPAS+G GQQLTI+S+EV A SRGDLRPDP+FD +N+IA
Sbjct: 1028 SQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIA 1087
Query: 199 LVVQED 216
LVVQ D
Sbjct: 1088 LVVQND 1093
>ref|XP_002888602.1| hypothetical protein ARALYDRAFT_894489 [Arabidopsis lyrata subsp.
lyrata] gi|297334443|gb|EFH64861.1| hypothetical protein
ARALYDRAFT_894489 [Arabidopsis lyrata subsp. lyrata]
Length = 1899
Score = 100 bits (250), Expect = 2e-19
Identities = 48/66 (72%), Positives = 56/66 (84%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQISGPD K TPLSQ+GF DPAS+G GQQLT++S+EV A SRGDLRPDP+FD +N+IA
Sbjct: 1011 SQISGPDGKSGPTPLSQMGFRDPASMGAGQQLTVLSIEVHAESRGDLRPDPRFDSVNVIA 1070
Query: 199 LVVQED 216
LVVQ D
Sbjct: 1071 LVVQND 1076
>gb|EOY11311.1| Recovery protein 3 isoform 3 [Theobroma cacao]
gi|508719415|gb|EOY11312.1| Recovery protein 3 isoform 3
[Theobroma cacao]
Length = 1590
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ ISGPD K TPLSQIGF DPAS+G GQQLT++S+EV SRGDLRPDP+FD
Sbjct: 695 SQDMSQ--ISGPDGKSRPTPLSQIGFRDPASVGAGQQLTLLSLEVHTESRGDLRPDPRFD 752
Query: 181 EINMIALVVQEDS 219
+N++AL +Q D+
Sbjct: 753 AVNVVALAIQNDN 765
>gb|EOY11310.1| Recovery protein 3 isoform 2, partial [Theobroma cacao]
Length = 1425
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ ISGPD K TPLSQIGF DPAS+G GQQLT++S+EV SRGDLRPDP+FD
Sbjct: 886 SQDMSQ--ISGPDGKSRPTPLSQIGFRDPASVGAGQQLTLLSLEVHTESRGDLRPDPRFD 943
Query: 181 EINMIALVVQEDS 219
+N++AL +Q D+
Sbjct: 944 AVNVVALAIQNDN 956
>gb|EOY11309.1| Recovery protein 3 isoform 1 [Theobroma cacao]
Length = 2035
Score = 99.4 bits (246), Expect = 4e-19
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ ISGPD K TPLSQIGF DPAS+G GQQLT++S+EV SRGDLRPDP+FD
Sbjct: 1140 SQDMSQ--ISGPDGKSRPTPLSQIGFRDPASVGAGQQLTLLSLEVHTESRGDLRPDPRFD 1197
Query: 181 EINMIALVVQEDS 219
+N++AL +Q D+
Sbjct: 1198 AVNVVALAIQNDN 1210
>ref|XP_006391268.1| hypothetical protein EUTSA_v10017996mg [Eutrema salsugineum]
gi|557087702|gb|ESQ28554.1| hypothetical protein
EUTSA_v10017996mg [Eutrema salsugineum]
Length = 1887
Score = 99.0 bits (245), Expect = 6e-19
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQIS P+ K TPLSQIGF DPAS+G GQQLT++S+EV A SRGDLRPDP+FD +N+IA
Sbjct: 1000 SQISAPEGKSGSTPLSQIGFRDPASMGAGQQLTVLSIEVHAESRGDLRPDPRFDSVNVIA 1059
Query: 199 LVVQEDS 219
LVVQ D+
Sbjct: 1060 LVVQNDN 1066
>gb|EEC82654.1| hypothetical protein OsI_27267 [Oryza sativa Indica Group]
gi|222637649|gb|EEE67781.1| hypothetical protein
OsJ_25510 [Oryza sativa Japonica Group]
Length = 1797
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/73 (65%), Positives = 59/73 (80%)
Frame = +1
Query: 19 SQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFDEINMIA 198
SQISG D K LTPLSQIGFCDPASIG GQQLTI+S+EV SRG+LRPDP+FD IN ++
Sbjct: 896 SQISGGDEKDKLTPLSQIGFCDPASIGGGQQLTIISIEVITESRGELRPDPRFDAINAVS 955
Query: 199 LVVQEDSCQSLAV 237
L V++D+ ++ V
Sbjct: 956 LAVEDDADNTIEV 968
>ref|XP_006577241.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X3
[Glycine max]
Length = 1699
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/72 (66%), Positives = 57/72 (79%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ IS PD K + TPLSQIGF DPAS+GCGQQLT++S+E+ A RGDL PDPQFD
Sbjct: 805 SQDISQ--ISDPDRKSSFTPLSQIGFRDPASVGCGQQLTLLSIEILAECRGDLLPDPQFD 862
Query: 181 EINMIALVVQED 216
IN++AL Q D
Sbjct: 863 AINIVALGFQND 874
>ref|XP_006577240.1| PREDICTED: DNA polymerase zeta catalytic subunit-like isoform X2
[Glycine max]
Length = 1750
Score = 98.2 bits (243), Expect = 1e-18
Identities = 48/72 (66%), Positives = 57/72 (79%)
Frame = +1
Query: 1 SQDVSQSQISGPDNKLTLTPLSQIGFCDPASIGCGQQLTIMSVEVQAASRGDLRPDPQFD 180
SQD+SQ IS PD K + TPLSQIGF DPAS+GCGQQLT++S+E+ A RGDL PDPQFD
Sbjct: 856 SQDISQ--ISDPDRKSSFTPLSQIGFRDPASVGCGQQLTLLSIEILAECRGDLLPDPQFD 913
Query: 181 EINMIALVVQED 216
IN++AL Q D
Sbjct: 914 AINIVALGFQND 925