BLASTX nr result
ID: Zingiber24_contig00045065
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00045065
(231 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001056152.2| Os05g0534900 [Oryza sativa Japonica Group] g... 79 5e-13
gb|EAY98820.1| hypothetical protein OsI_20765 [Oryza sativa Indi... 79 5e-13
gb|EEE64487.1| hypothetical protein OsJ_19337 [Oryza sativa Japo... 79 5e-13
gb|AAS75227.1| unknown protein [Oryza sativa Japonica Group] 79 5e-13
gb|EMS47658.1| hypothetical protein TRIUR3_24412 [Triticum urartu] 79 6e-13
ref|XP_006655525.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
ref|XP_003565996.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_004961392.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_002440137.1| hypothetical protein SORBIDRAFT_09g026680 [S... 71 2e-10
ref|XP_006842247.1| hypothetical protein AMTR_s00078p00195340 [A... 69 9e-10
gb|EXB50649.1| hypothetical protein L484_004167 [Morus notabilis] 66 4e-09
ref|XP_006283174.1| hypothetical protein CARUB_v10004205mg [Caps... 65 7e-09
ref|XP_006283173.1| hypothetical protein CARUB_v10004205mg [Caps... 65 7e-09
emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera] 65 9e-09
ref|XP_004289402.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
emb|CBI16090.3| unnamed protein product [Vitis vinifera] 65 1e-08
ref|XP_002302563.2| hypothetical protein POPTR_0002s15650g [Popu... 64 2e-08
ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_002511804.1| pentatricopeptide repeat-containing protein,... 64 2e-08
>ref|NP_001056152.2| Os05g0534900 [Oryza sativa Japonica Group]
gi|255676523|dbj|BAF18066.2| Os05g0534900, partial
[Oryza sativa Japonica Group]
Length = 528
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +3
Query: 3 SMKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
+++EG V V+ +C KEE Q+HA +TG LSY +V N+LIS+Y+ G L +A+ F
Sbjct: 17 NLREGDLVTVINICQTKEEVQQMHAYTFRTGDLSYTNVCNSLISIYSEIGSLIHAESIFK 76
Query: 183 NMRAHDVVSWTAIMAG 230
M++ DV+SWTA+MAG
Sbjct: 77 TMQSRDVISWTAVMAG 92
>gb|EAY98820.1| hypothetical protein OsI_20765 [Oryza sativa Indica Group]
Length = 882
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +3
Query: 3 SMKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
+++EG V V+ +C KEE Q+HA +TG LSY +V N+LIS+Y+ G L +A+ F
Sbjct: 371 NLREGDLVTVINICQTKEEVQQMHAYTFRTGDLSYTNVCNSLISIYSEIGSLIHAESIFK 430
Query: 183 NMRAHDVVSWTAIMAG 230
M++ DV+SWTA+MAG
Sbjct: 431 TMQSRDVISWTAVMAG 446
>gb|EEE64487.1| hypothetical protein OsJ_19337 [Oryza sativa Japonica Group]
Length = 882
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +3
Query: 3 SMKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
+++EG V V+ +C KEE Q+HA +TG LSY +V N+LIS+Y+ G L +A+ F
Sbjct: 371 NLREGDLVTVINICQTKEEVQQMHAYTFRTGDLSYTNVCNSLISIYSEIGSLIHAESIFK 430
Query: 183 NMRAHDVVSWTAIMAG 230
M++ DV+SWTA+MAG
Sbjct: 431 TMQSRDVISWTAVMAG 446
>gb|AAS75227.1| unknown protein [Oryza sativa Japonica Group]
Length = 882
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +3
Query: 3 SMKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
+++EG V V+ +C KEE Q+HA +TG LSY +V N+LIS+Y+ G L +A+ F
Sbjct: 371 NLREGDLVTVINICQTKEEVQQMHAYTFRTGDLSYTNVCNSLISIYSEIGSLIHAESIFK 430
Query: 183 NMRAHDVVSWTAIMAG 230
M++ DV+SWTA+MAG
Sbjct: 431 TMQSRDVISWTAVMAG 446
>gb|EMS47658.1| hypothetical protein TRIUR3_24412 [Triticum urartu]
Length = 809
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 3 SMKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
S++EG V VL +C KEE QVHA LK+G SY++V NALIS+Y+ G L +A+ F
Sbjct: 240 SLREGDLVTVLDVCHIKEEVQQVHAYTLKSGCFSYINVCNALISVYSEIGSLMHAEAIFK 299
Query: 183 NMRAHDVVSWTAIMAG 230
+ DVVSW A+MAG
Sbjct: 300 TSESRDVVSWAAVMAG 315
>ref|XP_006655525.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Oryza brachyantha]
Length = 882
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/76 (43%), Positives = 52/76 (68%)
Frame = +3
Query: 3 SMKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
+++EG V VL +C K+E Q+HA + G+L Y +V N+LIS+Y+ G L +A+ F
Sbjct: 370 NLREGDLVTVLNICQTKKEVQQIHAYTFRAGNLCYTNVCNSLISIYSEMGSLIHAESIFK 429
Query: 183 NMRAHDVVSWTAIMAG 230
M++ D++SWTA+MAG
Sbjct: 430 TMQSRDLISWTAVMAG 445
>ref|XP_003565996.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 873
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +3
Query: 6 MKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFDN 185
++EG V VL +C KEE QVHA LK+G + Y++V NALIS+Y+ G + +A+ F +
Sbjct: 365 LREGDLVTVLDVCHTKEEVLQVHAYALKSGGVFYVNVCNALISVYSELGLVMDAEAIFKS 424
Query: 186 MRAHDVVSWTAIMAG 230
M + DVVSW A+MAG
Sbjct: 425 MYSRDVVSWAAVMAG 439
>ref|XP_004961392.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like isoform X1 [Setaria italica]
gi|514747543|ref|XP_004961393.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g02330-like isoform X2 [Setaria italica]
gi|514747547|ref|XP_004961394.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g02330-like isoform X3 [Setaria italica]
gi|514747551|ref|XP_004961395.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g02330-like isoform X4 [Setaria italica]
gi|514747555|ref|XP_004961396.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g02330-like isoform X5 [Setaria italica]
Length = 897
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = +3
Query: 3 SMKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
+++EG V VL +C +EE Q+HA LKTG Y +V NAL+S+Y+ G L A+ F
Sbjct: 372 NLREGDMVTVLNICQIEEEVQQMHAFTLKTGRFCYTNVCNALMSVYSELGSLLCAESIFK 431
Query: 183 NMRAHDVVSWTAIMAG 230
M++ D+VSW +MAG
Sbjct: 432 TMQSPDIVSWAGVMAG 447
>ref|XP_002440137.1| hypothetical protein SORBIDRAFT_09g026680 [Sorghum bicolor]
gi|241945422|gb|EES18567.1| hypothetical protein
SORBIDRAFT_09g026680 [Sorghum bicolor]
Length = 878
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +3
Query: 3 SMKEGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
S++EG V V+ +C +EE Q+HA LKTG Y +V NAL+S+Y+ G L A+ F
Sbjct: 362 SLREGDMVTVVGICQIEEEVRQMHAFTLKTGGFCYTNVCNALMSVYSELGSLMCAESIFK 421
Query: 183 NMRAHDVVSWTAIMAG 230
M++ DVVSW+ +MAG
Sbjct: 422 TMQSPDVVSWSGVMAG 437
>ref|XP_006842247.1| hypothetical protein AMTR_s00078p00195340 [Amborella trichopoda]
gi|548844296|gb|ERN03922.1| hypothetical protein
AMTR_s00078p00195340 [Amborella trichopoda]
Length = 907
Score = 68.6 bits (166), Expect = 9e-10
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +3
Query: 12 EGAFVNVLRLCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFDNMR 191
+GA +++L LC EEG Q+HA + KT S +S+ NALI++YA+ G + +A F M
Sbjct: 276 QGALISLLGLCLSLEEGAQIHAYVSKTRWKSDVSIANALITMYAKCGSVSSANRIFFQMG 335
Query: 192 AHDVVSWTAIMAG 230
D+VSWTAI++G
Sbjct: 336 DKDLVSWTAIVSG 348
>gb|EXB50649.1| hypothetical protein L484_004167 [Morus notabilis]
Length = 636
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/76 (40%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Frame = +3
Query: 12 EGAFVNVLRLCF---CKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
E F +VL +C + G Q HA ++KTG+ S+++V NA+I++YAR G++ +A L F
Sbjct: 335 EATFTSVLTICSDLPTLQLGRQTHALVVKTGYGSFMAVCNAIITMYARCGNIDSALLEFS 394
Query: 183 NMRAHDVVSWTAIMAG 230
+M HD++SW +I+ G
Sbjct: 395 SMSNHDIISWNSIICG 410
>ref|XP_006283174.1| hypothetical protein CARUB_v10004205mg [Capsella rubella]
gi|482551879|gb|EOA16072.1| hypothetical protein
CARUB_v10004205mg [Capsella rubella]
Length = 764
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = +3
Query: 12 EGAFVNVLRLCFCKE---EGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
E FV ++ C E EG +VH +KTG +S SVGN+ I++YA+FG L +AK AFD
Sbjct: 372 EVTFVGLINALKCNEQIKEGLKVHGLCMKTGFVSEPSVGNSFITMYAKFGALEDAKKAFD 431
Query: 183 NMRAHDVVSWTAIMAG 230
++ +++SW A+++G
Sbjct: 432 DITFREIISWNAMISG 447
>ref|XP_006283173.1| hypothetical protein CARUB_v10004205mg [Capsella rubella]
gi|482551878|gb|EOA16071.1| hypothetical protein
CARUB_v10004205mg [Capsella rubella]
Length = 632
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = +3
Query: 12 EGAFVNVLRLCFCKE---EGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
E FV ++ C E EG +VH +KTG +S SVGN+ I++YA+FG L +AK AFD
Sbjct: 240 EVTFVGLINALKCNEQIKEGLKVHGLCMKTGFVSEPSVGNSFITMYAKFGALEDAKKAFD 299
Query: 183 NMRAHDVVSWTAIMAG 230
++ +++SW A+++G
Sbjct: 300 DITFREIISWNAMISG 315
>emb|CAN83112.1| hypothetical protein VITISV_026574 [Vitis vinifera]
Length = 833
Score = 65.1 bits (157), Expect = 9e-09
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Frame = +3
Query: 12 EGAFVNVLRLCF---CKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
E F +VL +C G Q+HA++ KTG +++V NA+++LYAR G+ +A L F
Sbjct: 540 EATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFS 599
Query: 183 NMRAHDVVSWTAIMAG 230
+M +HDV+SW +I+ G
Sbjct: 600 SMTSHDVISWNSIICG 615
>ref|XP_004289402.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Fragaria vesca subsp. vesca]
Length = 558
Score = 64.7 bits (156), Expect = 1e-08
Identities = 28/58 (48%), Positives = 41/58 (70%)
Frame = +3
Query: 57 EGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFDNMRAHDVVSWTAIMAG 230
EG ++HA I K+GH S L V N L+S+Y R G + +AK AF M+ HDV+SW ++++G
Sbjct: 332 EGKKIHALIFKSGHASNLCVQNGLVSMYGRCGAIHDAKWAFTLMKEHDVISWNSLLSG 389
>ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = +3
Query: 21 FVNVLR---LCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFDNMR 191
F +VLR + +EG Q+HA +LK G+ S L+V N L+S+YAR G + +AK F M
Sbjct: 387 FTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMD 446
Query: 192 AHDVVSWTAIMAG 230
HDV+SW ++++G
Sbjct: 447 RHDVISWNSLLSG 459
>emb|CBI16090.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = +3
Query: 21 FVNVLR---LCFCKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFDNMR 191
F +VLR + +EG Q+HA +LK G+ S L+V N L+S+YAR G + +AK F M
Sbjct: 217 FTSVLRAIGMISTLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMD 276
Query: 192 AHDVVSWTAIMAG 230
HDV+SW ++++G
Sbjct: 277 RHDVISWNSLLSG 289
>ref|XP_002302563.2| hypothetical protein POPTR_0002s15650g [Populus trichocarpa]
gi|550345094|gb|EEE81836.2| hypothetical protein
POPTR_0002s15650g [Populus trichocarpa]
Length = 800
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/57 (49%), Positives = 42/57 (73%)
Frame = +3
Query: 60 GTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFDNMRAHDVVSWTAIMAG 230
G Q+HA ++K+G S LSV N+L+++YA+ G + +A AFDNM DV+SWTA++ G
Sbjct: 447 GQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVG 503
>ref|XP_002282129.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 691
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = +3
Query: 12 EGAFVNVLRLCF---CKEEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFD 182
E F +VL +C G Q+HA++ KTG +++V NA+++LYAR G+ +A L F
Sbjct: 386 EATFTSVLTICSDLPTLHLGRQIHAQVTKTGFNYFVAVSNAMVTLYARCGNSNSALLLFS 445
Query: 183 NMRAHDVVSWTAIMAG 230
MR+HD +SW +I+ G
Sbjct: 446 AMRSHDFISWNSIICG 461
>ref|XP_002511804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548984|gb|EEF50473.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 607
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/59 (49%), Positives = 43/59 (72%)
Frame = +3
Query: 54 EEGTQVHAKILKTGHLSYLSVGNALISLYARFGDLFNAKLAFDNMRAHDVVSWTAIMAG 230
E G QVHA ILK+G S LS+ N+L+++YA+ G + +A FD+M+ DV+SWTA++ G
Sbjct: 440 EFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYVFDSMQIRDVISWTALIVG 498