BLASTX nr result

ID: Zingiber24_contig00045003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00045003
         (255 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313710.2| hypothetical protein POPTR_0009s13690g [Popu...    65   9e-09
ref|XP_006359695.1| PREDICTED: protein MCM10 homolog [Solanum tu...    55   7e-06

>ref|XP_002313710.2| hypothetical protein POPTR_0009s13690g [Populus trichocarpa]
           gi|550331664|gb|EEE87665.2| hypothetical protein
           POPTR_0009s13690g [Populus trichocarpa]
          Length = 416

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 42/90 (46%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
 Frame = -3

Query: 253 HAQGIRFLTQVTAKQEPKNSSKAASVCQNSNKYSTEKRSSLTKG-KISTTTQNEPQAKKK 77
           H+QGIRFL ++T K   KNS K  S  QN    S+EKR S TK    ST T+N+P  K+K
Sbjct: 327 HSQGIRFLNEITGKLSSKNSDK-VSATQNRQVNSSEKRKSSTKKLDPSTVTKNQPDLKRK 385

Query: 76  ----------KVDHAAQNMIELDIISSDEE 17
                     KV      MIELDI  SDEE
Sbjct: 386 KTVQGQASVDKVKQGTTKMIELDIFDSDEE 415


>ref|XP_006359695.1| PREDICTED: protein MCM10 homolog [Solanum tuberosum]
          Length = 415

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
 Frame = -3

Query: 253 HAQGIRFLTQVTAKQEPKNSSKAASVCQNSNKYSTEKRSSLTKGKISTTTQNEPQAKKKK 74
           H+QGIRFL+QVT K    N+ ++ +    +   +T +R S TK K  + T+      +KK
Sbjct: 325 HSQGIRFLSQVTGKLNSNNTKESITGRDQTRNMTTNERPSSTKRKNPSETRPSHSCDQKK 384

Query: 73  VDHAAQN-----------MIELDIISSDEEL 14
                QN           MIELDI+SSD+EL
Sbjct: 385 PKMGQQNSGQKLQQVKEKMIELDIVSSDDEL 415


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