BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00044952
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec...    61   1e-07
ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citr...    61   1e-07
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec...    59   9e-07

>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Citrus sinensis]
          Length = 1019

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -1

Query: 333 AKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVDVPTSST 154
           AK++ +DEL+  LG + H+V +A CCPV    +E  T      SL  ++ M+ D      
Sbjct: 508 AKVVHQDELLLMLGEKRHEVQFAYCCPVNVDELEKFTT----TSLTPTARMLRD------ 557

Query: 153 TEDVNSAENRSSLHSLLV-QFRAKIDCTNIQVVPGHLQLRSFHVSVCSNEDC 1
                   N+SSL  LLV +   K+   NIQ    HLQ+ SFH+SVC  + C
Sbjct: 558 -------PNKSSLIRLLVAKLSRKLSEGNIQDFGEHLQVESFHLSVCLKDTC 602


>ref|XP_006448159.1| hypothetical protein CICLE_v10014563mg [Citrus clementina]
           gi|557550770|gb|ESR61399.1| hypothetical protein
           CICLE_v10014563mg [Citrus clementina]
          Length = 646

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -1

Query: 333 AKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVDVPTSST 154
           AK++ +DEL+  LG + H+V +A CCPV    +E  T      SL  ++ M+ D      
Sbjct: 508 AKVVHQDELLLMLGEKRHEVQFAYCCPVNVDELEKFTT----TSLTPTARMLRD------ 557

Query: 153 TEDVNSAENRSSLHSLLV-QFRAKIDCTNIQVVPGHLQLRSFHVSVCSNEDC 1
                   N+SSL  LLV +   K+   NIQ    HLQ+ SFH+SVC  + C
Sbjct: 558 -------PNKSSLIRLLVAKLSRKLSEGNIQDFGEHLQVESFHLSVCLKDTC 602


>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Fragaria vesca subsp. vesca]
          Length = 1009

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/111 (32%), Positives = 51/111 (45%)
 Frame = -1

Query: 333 AKIIDEDELVHTLGLEEHKVLYALCCPVEFSTMELATNEANIISLCESSLMVVDVPTSST 154
           AK++ +DEL   LG ++H+V +A CCP      +  T+                +P SST
Sbjct: 506 AKVVHQDELPLMLGEKKHQVKFAYCCPAHIGNSQENTS----------------LPLSST 549

Query: 153 TEDVNSAENRSSLHSLLVQFRAKIDCTNIQVVPGHLQLRSFHVSVCSNEDC 1
             D+        L     +   ++   NIQ    HLQL S HVS+CSN DC
Sbjct: 550 NNDL--------LQLFSAKLANELSEGNIQHFGDHLQLESIHVSICSNNDC 592