BLASTX nr result
ID: Zingiber24_contig00044927
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00044927
(705 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containi... 108 2e-21
ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Sela... 107 3e-21
ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containi... 107 5e-21
ref|NP_193101.2| pentatricopeptide repeat-containing protein [Ar... 107 5e-21
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr... 107 5e-21
emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|72680... 107 5e-21
gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus pe... 106 6e-21
ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containi... 106 6e-21
ref|XP_002868345.1| pentatricopeptide repeat-containing protein ... 106 6e-21
gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus... 106 8e-21
ref|XP_006282436.1| hypothetical protein CARUB_v10004043mg [Caps... 106 8e-21
ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi... 106 8e-21
ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Sela... 106 8e-21
emb|CBI32403.3| unnamed protein product [Vitis vinifera] 106 8e-21
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera] 106 8e-21
ref|XP_006410248.1| hypothetical protein EUTSA_v10016243mg [Eutr... 105 1e-20
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi... 105 1e-20
ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Sela... 105 1e-20
ref|XP_001761392.1| predicted protein [Physcomitrella patens] gi... 105 1e-20
gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily p... 105 2e-20
>ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cicer arietinum]
Length = 824
Score = 108 bits (270), Expect = 2e-21
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFG++S P R PI +FKNLRVC DCH+ TK +S++T R+I+VRDSNRFHHF+ G CS
Sbjct: 760 LAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRITERDIVVRDSNRFHHFKDGICS 819
Query: 523 CDDYW 509
CDDYW
Sbjct: 820 CDDYW 824
>ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein
SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 107 bits (268), Expect = 3e-21
Identities = 45/65 (69%), Positives = 56/65 (86%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFGL+S P P+ + KNLRVC+DCH+ TK++SKVTGREI+VRD+NRFHHF+ G CS
Sbjct: 588 LAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCS 647
Query: 523 CDDYW 509
C+DYW
Sbjct: 648 CNDYW 652
>ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Fragaria vesca subsp. vesca]
Length = 867
Score = 107 bits (266), Expect = 5e-21
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFG++S P + PI +FKNLRVC DCH+ TK++S +T REIIVRDSNRFHHF+ G CS
Sbjct: 803 LAIAFGIISTPPKTPIRIFKNLRVCGDCHTVTKLISVITEREIIVRDSNRFHHFKDGTCS 862
Query: 523 CDDYW 509
C DYW
Sbjct: 863 CGDYW 867
>ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g13650 gi|332657909|gb|AEE83309.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 107 bits (266), Expect = 5e-21
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAI+FGL+SLP PI V KNLRVCNDCH++ K VSKV+ REIIVRD+ RFHHF GG CS
Sbjct: 1000 LAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACS 1059
Query: 523 CDDYW 509
C DYW
Sbjct: 1060 CKDYW 1064
>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 107 bits (266), Expect = 5e-21
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIA+G++SLP+ PI +FKNLRVC DCHS +K +SKVTGREII RD++RFHHF+ G CS
Sbjct: 773 LAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCS 832
Query: 523 CDDYW 509
C DYW
Sbjct: 833 CGDYW 837
>emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|7268069|emb|CAB78407.1|
putative protein [Arabidopsis thaliana]
Length = 1024
Score = 107 bits (266), Expect = 5e-21
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAI+FGL+SLP PI V KNLRVCNDCH++ K VSKV+ REIIVRD+ RFHHF GG CS
Sbjct: 960 LAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACS 1019
Query: 523 CDDYW 509
C DYW
Sbjct: 1020 CKDYW 1024
>gb|EMJ00195.1| hypothetical protein PRUPE_ppa002176mg [Prunus persica]
Length = 705
Score = 106 bits (265), Expect = 6e-21
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFGL+S P + PI +FKNLRVC DCH+ TK +S +T REIIVRDSNRFHHF+ G CS
Sbjct: 641 LAIAFGLISTPPKTPIRIFKNLRVCGDCHNATKFISVITEREIIVRDSNRFHHFKDGACS 700
Query: 523 CDDYW 509
C DYW
Sbjct: 701 CGDYW 705
>ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
[Solanum lycopersicum]
Length = 911
Score = 106 bits (265), Expect = 6e-21
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIA+G++S P + P+ ++KNLRVC DCH+ TK++SK+T REIIVRDSNRFHHF+ G CS
Sbjct: 847 LAIAYGILSTPPKSPLRIYKNLRVCGDCHNVTKLISKITEREIIVRDSNRFHHFKNGVCS 906
Query: 523 CDDYW 509
C DYW
Sbjct: 907 CGDYW 911
>ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297314181|gb|EFH44604.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1047
Score = 106 bits (265), Expect = 6e-21
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAI+FGL+SLP PI V KNLRVCNDCH + K VSKV+ REIIVRD+ RFHHF GG CS
Sbjct: 983 LAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACS 1042
Query: 523 CDDYW 509
C DYW
Sbjct: 1043 CKDYW 1047
>gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus vulgaris]
Length = 816
Score = 106 bits (264), Expect = 8e-21
Identities = 45/65 (69%), Positives = 54/65 (83%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
+AIAFGL+S P + PI +FKNLRVC DCH+ TK +SK+T R+IIVRDSNRFHHF+ G CS
Sbjct: 752 VAIAFGLISTPPKSPIRIFKNLRVCGDCHNATKYISKITERDIIVRDSNRFHHFKDGGCS 811
Query: 523 CDDYW 509
C DYW
Sbjct: 812 CGDYW 816
>ref|XP_006282436.1| hypothetical protein CARUB_v10004043mg [Capsella rubella]
gi|565439136|ref|XP_006282437.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
gi|565439139|ref|XP_006282438.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
gi|482551141|gb|EOA15334.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
gi|482551142|gb|EOA15335.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
gi|482551143|gb|EOA15336.1| hypothetical protein
CARUB_v10004043mg [Capsella rubella]
Length = 1050
Score = 106 bits (264), Expect = 8e-21
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAI+FGL+SLP PI V KNLRVCNDCH + K VSKV+ REIIVRD+ RFHHF GG CS
Sbjct: 986 LAISFGLLSLPRTMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACS 1045
Query: 523 CDDYW 509
C DYW
Sbjct: 1046 CKDYW 1050
>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
[Vitis vinifera]
Length = 891
Score = 106 bits (264), Expect = 8e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFG++S P + PI +FKNLRVC DCH+ TK +S++T REI+VRDSNRFHHF+ G CS
Sbjct: 827 LAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICS 886
Query: 523 CDDYW 509
C DYW
Sbjct: 887 CGDYW 891
>ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
gi|300157279|gb|EFJ23905.1| hypothetical protein
SELMODRAFT_102603 [Selaginella moellendorffii]
Length = 485
Score = 106 bits (264), Expect = 8e-21
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFGL+S P P+ + KNLRVC+DCH+ TK++SKVTGREI+VRD+NRFHHF G CS
Sbjct: 421 LAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCS 480
Query: 523 CDDYW 509
C+DYW
Sbjct: 481 CNDYW 485
>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 106 bits (264), Expect = 8e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFG++S P + PI +FKNLRVC DCH+ TK +S++T REI+VRDSNRFHHF+ G CS
Sbjct: 594 LAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICS 653
Query: 523 CDDYW 509
C DYW
Sbjct: 654 CGDYW 658
>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 106 bits (264), Expect = 8e-21
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFG++S P + PI +FKNLRVC DCH+ TK +S++T REI+VRDSNRFHHF+ G CS
Sbjct: 827 LAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICS 886
Query: 523 CDDYW 509
C DYW
Sbjct: 887 CGDYW 891
>ref|XP_006410248.1| hypothetical protein EUTSA_v10016243mg [Eutrema salsugineum]
gi|557111417|gb|ESQ51701.1| hypothetical protein
EUTSA_v10016243mg [Eutrema salsugineum]
Length = 844
Score = 105 bits (263), Expect = 1e-20
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAI+FGL+SLP PI V KNLRVCNDCH + K VSKV+ REIIVRD+ RFHHF GG CS
Sbjct: 780 LAISFGLLSLPGTIPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEGGACS 839
Query: 523 CDDYW 509
C DYW
Sbjct: 840 CKDYW 844
>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Glycine max]
gi|571544149|ref|XP_006602168.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Glycine max]
gi|571544153|ref|XP_006602169.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Glycine max]
gi|571544157|ref|XP_006602170.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Glycine max]
gi|571544163|ref|XP_006602171.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X5 [Glycine max]
Length = 824
Score = 105 bits (263), Expect = 1e-20
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAI FG++S P + PI +FKNLRVC DCH+ TK +SK+T REIIVRDSNRFHHF+ G CS
Sbjct: 760 LAIVFGIISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICS 819
Query: 523 CDDYW 509
C DYW
Sbjct: 820 CGDYW 824
>ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein
SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 105 bits (263), Expect = 1e-20
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIAFGL+S P + + +FKNLRVC DCH+ TK +SK+TGREI+VRD++RFHHFR G CS
Sbjct: 623 LAIAFGLISTPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCS 682
Query: 523 CDDYW 509
C DYW
Sbjct: 683 CKDYW 687
>ref|XP_001761392.1| predicted protein [Physcomitrella patens]
gi|162687398|gb|EDQ73781.1| predicted protein
[Physcomitrella patens]
Length = 833
Score = 105 bits (262), Expect = 1e-20
Identities = 44/65 (67%), Positives = 56/65 (86%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIA+G++SLP+ PI ++KNLRVC+DCHS +K +SKVTGREII RD++RFHHF+ G CS
Sbjct: 769 LAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASRFHHFKDGVCS 828
Query: 523 CDDYW 509
C DYW
Sbjct: 829 CGDYW 833
>gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 820
Score = 105 bits (261), Expect = 2e-20
Identities = 44/65 (67%), Positives = 54/65 (83%)
Frame = -3
Query: 703 LAIAFGLMSLPTRCPITVFKNLRVCNDCHSFTKMVSKVTGREIIVRDSNRFHHFRGGRCS 524
LAIA+G++S P + PI +FKNLRVC DCH+ TK +S++T REIIVRDSNRFHHF+ G CS
Sbjct: 756 LAIAYGIISSPPKSPIRIFKNLRVCGDCHNATKFISQITDREIIVRDSNRFHHFKDGICS 815
Query: 523 CDDYW 509
C DYW
Sbjct: 816 CGDYW 820